RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SP8Q8IXZ3 490 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 ZNF296Q8WUU4 475 aaPredicted RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 ZBTB12Q9Y330 459 aaPredicted RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 RRP7AQ9Y3A4 280 aaKnown RBP3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 ABCC4O15439 1325 aa3.16□□□□□ -1.9
RNU4-53P-201ENST00000410828 THSD7BQ9C0I4 1608 aa3.15□□□□□ -1.9
RNU4-53P-201ENST00000410828 IBTKQ9P2D0 1353 aaPredicted RBP3.15□□□□□ -1.9
RNU4-53P-201ENST00000410828 COL4A5P29400 1685 aa3.15□□□□□ -1.9
RNU4-53P-201ENST00000410828 SHTN1A0MZ66 631 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 YDJCA8MPS7 323 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 ADM5C9JUS6 153 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 GPR25O00155 361 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 PSMD14O00487 310 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 HTATSF1O43719 755 aaKnown RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 FKTNO75072 461 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 NTSR2O95665 410 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 TBC1D8O95759 1140 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 FXR1P51114 621 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 GRAPQ13588 217 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 TAF7Q15545 349 aaPredicted RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 WASHC4Q2M389 1173 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 KIF4BQ2VIQ3 1234 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 SLC10A5Q5PT55 438 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 CC2D1BQ5T0F9 858 aaKnown RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 GIGYF2Q6Y7W6 1299 aaKnown RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 TTLL7Q6ZT98 887 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 C3orf67Q6ZVT6 689 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 DDX46Q7L014 1031 aaKnown RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 MCM10Q7L590 875 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 TMC4Q7Z404 712 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 SLC51AQ86UW1 340 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZNF34Q8IZ26 560 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 GRAPLQ8TC17 118 aaPredicted RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 PNISRQ8TF01 805 aaKnown RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 CDCA5Q96FF9 252 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 PHACTR3Q96KR7 559 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 UTP14AQ9BVJ6 771 aaKnown RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZBTB3Q9H5J0 574 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 GGA3Q9NZ52 723 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 NSFL1CQ9UNZ2 370 aaKnown RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 NUDCQ9Y266 331 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 RIC1Q4ADV7 1423 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 COL11A2P13942 1736 aaPredicted RBP3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 LTBP1Q14766 1721 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 UBN2Q6ZU65 1347 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 SCN11AQ9UI33 1791 aa3.15□□□□□ -1.91
RNU4-53P-201ENST00000410828 G3V3G9 751 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 C6orf229H3BNL8 230 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 ALDH1A1P00352 501 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 EGFRP00533 1210 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 NEFMP07197 916 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 U2AF1L5P0DN76 240 aaPredicted RBP3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 MYL6BP14649 208 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 TM4SF4P48230 202 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 U2AF1Q01081 240 aaKnown RBP eCLIP3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 SREBF2Q12772 1141 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 TCIRG1Q13488 830 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 SCARF1Q14162 830 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 DCTN1Q14203 1278 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 HSP90AB3PQ58FF7 597 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 DCAF8Q5TAQ9 597 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 RASAL3Q86YV0 1011 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 NECTIN2Q92692 538 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 CFAP53Q96M91 514 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 EYA3Q99504 573 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZC3H12CQ9C0D7 883 aaKnown RBP3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 RSPH6AQ9H0K4 717 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 DBNDD1Q9H9R9 158 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 MIS18AQ9NYP9 233 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 ERBB4Q15303 1308 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 SH3TC1Q8TE82 1336 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 SCN7AQ01118 1682 aa3.14□□□□□ -1.91
RNU4-53P-201ENST00000410828 UBE2Q2LH0YL09 131 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 DLL1O00548 723 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 RIMBP2O15034 1052 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 PER1O15534 1290 aaPredicted RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 ECE2O60344 883 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 VIL1P09327 827 aaKnown RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 USP17L8P0C7I0 530 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 HCLS1P14317 486 aaPredicted RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 NF2P35240 595 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 INHBEP58166 350 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 ZNF280AP59817 542 aaPredicted RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 EIF4A1P60842 406 aaKnown RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 CNGB1Q14028 1251 aaPredicted RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 TTLL12Q14166 644 aaPredicted RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 DOK7Q18PE1 504 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 ANGEL2Q5VTE6 544 aaKnown RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 SLC17A8Q8NDX2 589 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 AGBL3Q8NEM8 1001 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 TMEM106CQ9BVX2 250 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 CFHR5Q9BXR6 569 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 KCNQ5Q9NR82 932 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 POLLQ9UGP5 575 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 TRMT112Q9UI30 125 aaKnown RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 COLQQ9Y215 455 aaPredicted RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 TRIM17Q9Y577 477 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 TRPM7Q96QT4 1865 aa3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 ASTN2O75129 1339 aaPredicted RBP3.13□□□□□ -1.91
RNU4-53P-201ENST00000410828 PITPNM2Q9BZ72 1349 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms