RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 BAG6P46379 1132 aa4.26□□□□□ -1.73
RNU2-54P-201ENST00000410299 TREML1Q86YW5 311 aa4.26□□□□□ -1.73
RNU2-54P-201ENST00000410299 EFCC1Q9HA90 598 aa4.26□□□□□ -1.73
RNU2-54P-201ENST00000410299 RTCBQ9Y3I0 505 aaKnown RBP4.26□□□□□ -1.73
RNU2-54P-201ENST00000410299 LILRB5O75023 590 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 MAP3K6O95382 1288 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 FURINP09958 794 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 MLLT1Q03111 559 aaPredicted RBP4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 NAA30Q147X3 362 aaPredicted RBP4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 PRRT3Q5FWE3 981 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 FAM26DQ5JW98 314 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 TRAPPC3LQ5T215 181 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 PSAPL1Q6NUJ1 521 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 ETFBKMTQ8IXQ9 262 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 RGL4Q8IZJ4 473 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 CMTR1Q8N1G2 835 aaKnown RBP4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 PBXIP1Q96AQ6 731 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 JPH1Q9HDC5 661 aaPredicted RBP4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 CXXC1Q9P0U4 656 aaPredicted RBP4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 SLAIN2Q9P270 581 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 SERPINA10Q9UK55 444 aa4.25□□□□□ -1.73
RNU2-54P-201ENST00000410299 SPDYE3A6NKU9 549 aa4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 BTBD11A6QL63 1104 aa4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 ZBTB42B2RXF5 422 aa4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 RARAP10276 462 aa4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 CPB1P15086 417 aa4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 AFF1P51825 1210 aaKnown RBP4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 TRIM28Q13263 835 aaKnown RBP4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 GRIK4Q16099 956 aa4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 C16orf46Q6P387 395 aa4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 DHX32Q7L7V1 743 aaKnown RBP4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 FAM35AQ86V20 835 aa4.24□□□□□ -1.73
RNU2-54P-201ENST00000410299 TNFRSF10BO14763 440 aa4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 XYLBO75191 536 aa4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 RGS9O75916 674 aaPredicted RBP4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 PLAURQ03405 335 aa4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 DOC2BQ14184 412 aa4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 PERM1Q5SV97 790 aa4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 HFE2Q6ZVN8 426 aa4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 TRPM4Q8TD43 1214 aa4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 CLP1Q92989 425 aaKnown RBP4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 COL26A1Q96A83 441 aa4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 KCNMB2Q9Y691 235 aa4.23□□□□□ -1.73
RNU2-54P-201ENST00000410299 A0A0A0MRY4 1105 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 ZBTB39O15060 712 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 APBA3O96018 575 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 EGFRP00533 1210 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 ATP2B4P23634 1241 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 BRD2P25440 801 aaKnown RBP4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 GATA4P43694 442 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 TRIP4Q15650 581 aaPredicted RBP4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 DMRTC2Q8IXT2 367 aaPredicted RBP4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 CCDC82Q8N4S0 544 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 LPIN3Q9BQK8 851 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 C1orf115Q9H7X2 142 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 C11orf16Q9NQ32 467 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 TLR7Q9NYK1 1049 aaKnown RBP4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 SEPT3Q9UH03 358 aa4.22□□□□□ -1.73
RNU2-54P-201ENST00000410299 J3QW42 95 aa4.21□□□□□ -1.74
RNU2-54P-201ENST00000410299 MMP20O60882 483 aa4.21□□□□□ -1.74
RNU2-54P-201ENST00000410299 PTCD1O75127 700 aaKnown RBP4.21□□□□□ -1.74
RNU2-54P-201ENST00000410299 SCNN1AP37088 669 aa4.21□□□□□ -1.74
RNU2-54P-201ENST00000410299 GPLD1P80108 840 aa4.21□□□□□ -1.74
RNU2-54P-201ENST00000410299 GRIK5Q16478 980 aa4.21□□□□□ -1.74
RNU2-54P-201ENST00000410299 PCSK7Q16549 785 aa4.21□□□□□ -1.74
RNU2-54P-201ENST00000410299 ELMSAN1Q6PJG2 1045 aa4.21□□□□□ -1.74
RNU2-54P-201ENST00000410299 SHISA2Q6UWI4 295 aa4.21□□□□□ -1.74
RNU2-54P-201ENST00000410299 UBAP1LF5GYI3 381 aa4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 ELNP15502 786 aa4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 SELPP16109 830 aa4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 EIF2AK2P19525 551 aaKnown RBP4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 ZAP70P43403 619 aa4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 NRLP54845 237 aa4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 RAC1P63000 192 aa4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 ILDR2Q71H61 639 aa4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 GPR152Q8TDT2 470 aa4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 NSUN5Q96P11 429 aaKnown RBP4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 SMG9Q9H0W8 520 aaKnown RBP4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 STIM2Q9P246 746 aa4.2□□□□□ -1.74
RNU2-54P-201ENST00000410299 LOC102724428A0A0B4J2F2 783 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 PSAPP07602 524 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 ARID4AP29374 1257 aaPredicted RBP4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 SIK1P57059 783 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 MSL1Q68DK7 614 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 NLRP13Q86W25 1043 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 ATCAYQ86WG3 371 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 FMR1NBQ8N0W7 255 aaPredicted RBP4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 PIK3R5Q8WYR1 880 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 PLD4Q96BZ4 506 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 NACC1Q96RE7 527 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 TPSG1Q9NRR2 321 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 FRRS1LQ9P0K9 344 aa4.19□□□□□ -1.74
RNU2-54P-201ENST00000410299 SCO2A0A1W2PP80 73 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 CARNS1A5YM72 827 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 C9orf172C9J069 976 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 ITGB7P26010 798 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 MBTPS1Q14703 1052 aa4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 COL13A1Q5TAT6 717 aaPredicted RBP4.18□□□□□ -1.74
RNU2-54P-201ENST00000410299 GDF6Q6KF10 455 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms