RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 DAB2P98082 770 aa8.4□□□□□ -1.06
LSM5-206ENST00000409987 XPCQ01831 940 aaPredicted RBP8.4□□□□□ -1.06
LSM5-206ENST00000409987 GRIN2CQ14957 1233 aa8.4□□□□□ -1.06
LSM5-206ENST00000409987 TMC4Q7Z404 712 aa8.4□□□□□ -1.06
LSM5-206ENST00000409987 NLRP13Q86W25 1043 aa8.4□□□□□ -1.06
LSM5-206ENST00000409987 FBF1Q8TES7 1133 aa8.4□□□□□ -1.06
LSM5-206ENST00000409987 ZNF837Q96EG3 531 aaPredicted RBP8.4□□□□□ -1.06
LSM5-206ENST00000409987 CNTN3Q9P232 1028 aa8.4□□□□□ -1.06
LSM5-206ENST00000409987 PHACTR2O75167 634 aa8.39□□□□□ -1.07
LSM5-206ENST00000409987 SASH3O75995 380 aa8.39□□□□□ -1.07
LSM5-206ENST00000409987 C1orf127Q8N9H9 656 aa8.39□□□□□ -1.07
LSM5-206ENST00000409987 GSX2Q9BZM3 304 aa8.39□□□□□ -1.07
LSM5-206ENST00000409987 ABI2Q9NYB9 513 aaPredicted RBP8.39□□□□□ -1.07
LSM5-206ENST00000409987 GNA15P30679 374 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 PSMD2Q13200 908 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 LAMC2Q13753 1193 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 CCINQ13939 588 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 LDLRAD1Q5T700 205 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 KRT25Q7Z3Z0 450 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 GTPBP3Q969Y2 492 aaKnown RBP8.38□□□□□ -1.07
LSM5-206ENST00000409987 CCDC74AQ96AQ1 378 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 ABHD17AQ96GS6 310 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 GMCL1Q96IK5 515 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 BCL11AQ9H165 835 aa8.38□□□□□ -1.07
LSM5-206ENST00000409987 EREGO14944 169 aa8.37□□□□□ -1.07
LSM5-206ENST00000409987 POLR3DP05423 398 aaPredicted RBP8.37□□□□□ -1.07
LSM5-206ENST00000409987 TARSP26639 723 aaKnown RBP8.37□□□□□ -1.07
LSM5-206ENST00000409987 IRS1P35568 1242 aa8.37□□□□□ -1.07
LSM5-206ENST00000409987 TSNAXIP1Q2TAA8 658 aa8.37□□□□□ -1.07
LSM5-206ENST00000409987 PI16Q6UXB8 463 aa8.37□□□□□ -1.07
LSM5-206ENST00000409987 EPS8L3Q8TE67 593 aaKnown RBP8.37□□□□□ -1.07
LSM5-206ENST00000409987 BACH2Q9BYV9 841 aa8.37□□□□□ -1.07
LSM5-206ENST00000409987 MARK1Q9P0L2 795 aa8.37□□□□□ -1.07
LSM5-206ENST00000409987 ZFATQ9P243 1243 aa8.37□□□□□ -1.07
LSM5-206ENST00000409987 SORBS3O60504 671 aa8.36□□□□□ -1.07
LSM5-206ENST00000409987 CYP2E1P05181 493 aaPredicted RBP8.36□□□□□ -1.07
LSM5-206ENST00000409987 TCF3P15923 654 aa8.36□□□□□ -1.07
LSM5-206ENST00000409987 CD33P20138 364 aa8.36□□□□□ -1.07
LSM5-206ENST00000409987 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.36□□□□□ -1.07
LSM5-206ENST00000409987 TTC39BQ5VTQ0 682 aaPredicted RBP8.36□□□□□ -1.07
LSM5-206ENST00000409987 SLC30A3Q99726 388 aa8.36□□□□□ -1.07
LSM5-206ENST00000409987 MRS2Q9HD23 443 aa8.36□□□□□ -1.07
LSM5-206ENST00000409987 C11orf95C9JLR9 678 aaPredicted RBP8.35□□□□□ -1.07
LSM5-206ENST00000409987 MMP20O60882 483 aa8.35□□□□□ -1.07
LSM5-206ENST00000409987 PPFIA3O75145 1194 aa8.35□□□□□ -1.07
LSM5-206ENST00000409987 SPEM2Q0P670 501 aa8.35□□□□□ -1.07
LSM5-206ENST00000409987 GALNT12Q8IXK2 581 aa8.35□□□□□ -1.07
LSM5-206ENST00000409987 NPHS2Q9NP85 383 aa8.35□□□□□ -1.07
LSM5-206ENST00000409987 ATXN7L1Q9ULK2 861 aaPredicted RBP8.35□□□□□ -1.07
LSM5-206ENST00000409987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.35□□□□□ -1.07
LSM5-206ENST00000409987 NFKB1P19838 968 aa8.34□□□□□ -1.07
LSM5-206ENST00000409987 CES1P23141 567 aa8.34□□□□□ -1.07
LSM5-206ENST00000409987 VEGFBP49765 207 aa8.34□□□□□ -1.07
LSM5-206ENST00000409987 FRMD6Q96NE9 622 aa8.34□□□□□ -1.07
LSM5-206ENST00000409987 VTI1BQ9UEU0 232 aa8.34□□□□□ -1.07
LSM5-206ENST00000409987 SPG7Q9UQ90 795 aa8.34□□□□□ -1.07
LSM5-206ENST00000409987 AK5Q9Y6K8 562 aa8.34□□□□□ -1.07
LSM5-206ENST00000409987 POTECB2RU33 542 aa8.33□□□□□ -1.08
LSM5-206ENST00000409987 GPR25O00155 361 aa8.33□□□□□ -1.08
LSM5-206ENST00000409987 RARAP10276 462 aa8.33□□□□□ -1.08
LSM5-206ENST00000409987 RAB44Q7Z6P3 723 aaPredicted RBP8.33□□□□□ -1.08
LSM5-206ENST00000409987 OR13H1Q8NG92 308 aa8.33□□□□□ -1.08
LSM5-206ENST00000409987 PNMA5Q96PV4 448 aa8.33□□□□□ -1.08
LSM5-206ENST00000409987 KANSL3Q9P2N6 904 aa8.33□□□□□ -1.08
LSM5-206ENST00000409987 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.33□□□□□ -1.08
LSM5-206ENST00000409987 CDC14CA4D256 554 aa8.32□□□□□ -1.08
LSM5-206ENST00000409987 FGFR3P22607 806 aa8.32□□□□□ -1.08
LSM5-206ENST00000409987 VWA5B2Q8N398 1253 aa8.32□□□□□ -1.08
LSM5-206ENST00000409987 BHMTQ93088 406 aa8.32□□□□□ -1.08
LSM5-206ENST00000409987 PMEPA1Q969W9 287 aa8.32□□□□□ -1.08
LSM5-206ENST00000409987 OSBPL7Q9BZF2 842 aa8.32□□□□□ -1.08
LSM5-206ENST00000409987 NLRP2Q9NX02 1062 aa8.32□□□□□ -1.08
LSM5-206ENST00000409987 CTSHP09668 335 aa8.31□□□□□ -1.08
LSM5-206ENST00000409987 CTBSQ01459 385 aa8.31□□□□□ -1.08
LSM5-206ENST00000409987 FAM182BQ5T319 152 aa8.31□□□□□ -1.08
LSM5-206ENST00000409987 C12orf49Q9H741 205 aa8.31□□□□□ -1.08
LSM5-206ENST00000409987 EFCC1Q9HA90 598 aa8.31□□□□□ -1.08
LSM5-206ENST00000409987 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
LSM5-206ENST00000409987 TLR7Q9NYK1 1049 aaKnown RBP8.31□□□□□ -1.08
LSM5-206ENST00000409987 PHF24Q9UPV7 400 aa8.31□□□□□ -1.08
LSM5-206ENST00000409987 MAP3K6O95382 1288 aa8.3□□□□□ -1.08
LSM5-206ENST00000409987 EIF4BP23588 611 aaKnown RBP8.3□□□□□ -1.08
LSM5-206ENST00000409987 ITGAEP38570 1179 aa8.3□□□□□ -1.08
LSM5-206ENST00000409987 COL13A1Q5TAT6 717 aaPredicted RBP8.3□□□□□ -1.08
LSM5-206ENST00000409987 TMEM87AQ8NBN3 555 aa8.3□□□□□ -1.08
LSM5-206ENST00000409987 NANOS1Q8WY41 292 aaKnown RBP8.3□□□□□ -1.08
LSM5-206ENST00000409987 TRERF1Q96PN7 1200 aa8.3□□□□□ -1.08
LSM5-206ENST00000409987 SALL4Q9UJQ4 1053 aa8.3□□□□□ -1.08
LSM5-206ENST00000409987 A0A1W2PP55 124 aa8.29□□□□□ -1.08
LSM5-206ENST00000409987 PHF20L1A8MW92 1017 aa8.29□□□□□ -1.08
LSM5-206ENST00000409987 SCAMP3O14828 347 aaKnown RBP8.29□□□□□ -1.08
LSM5-206ENST00000409987 GIPC1O14908 333 aa8.29□□□□□ -1.08
LSM5-206ENST00000409987 PSAPP07602 524 aa8.29□□□□□ -1.08
LSM5-206ENST00000409987 PEAR1Q5VY43 1037 aaPredicted RBP8.29□□□□□ -1.08
LSM5-206ENST00000409987 NXPE4Q6UWF7 544 aa8.29□□□□□ -1.08
LSM5-206ENST00000409987 SV2AQ7L0J3 742 aa8.29□□□□□ -1.08
LSM5-206ENST00000409987 DHX32Q7L7V1 743 aaKnown RBP8.29□□□□□ -1.08
LSM5-206ENST00000409987 SUV39H2Q9H5I1 410 aa8.29□□□□□ -1.08
LSM5-206ENST00000409987 C2CD2LO14523 706 aa8.28□□□□□ -1.08
LSM5-206ENST00000409987 GADD45BO75293 160 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms