RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CCDC85AQ96PX6 553 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-202ENST00000409472 KLHL40Q2TBA0 621 aa18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 SKOR2Q2VWA4 1001 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 CREB3L3Q68CJ9 461 aa18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 PUS3Q9BZE2 481 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 NSFL1CQ9UNZ2 370 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 ATP5JP18859 108 aa18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 DDX46Q7L014 1031 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 GPT2Q8TD30 523 aa18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 MAP4K1Q92918 833 aa18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 SEC62Q99442 399 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 ZNF609O15014 1411 aa18.26■□□□□ 0.51
SCAMP4-202ENST00000409472 SYNE4Q8N205 404 aa18.25■□□□□ 0.51
SCAMP4-202ENST00000409472 CCDC191Q8NCU4 936 aa18.25■□□□□ 0.51
SCAMP4-202ENST00000409472 KCNB2Q92953 911 aa18.25■□□□□ 0.51
SCAMP4-202ENST00000409472 TCEANC2Q96MN5 208 aa18.25■□□□□ 0.51
SCAMP4-202ENST00000409472 SNRKQ9NRH2 765 aa18.25■□□□□ 0.51
SCAMP4-202ENST00000409472 TIMM10P62072 90 aa18.25■□□□□ 0.51
SCAMP4-202ENST00000409472 ST3GAL1Q11201 340 aa18.25■□□□□ 0.51
SCAMP4-202ENST00000409472 ISCA1Q9BUE6 129 aa18.25■□□□□ 0.51
SCAMP4-202ENST00000409472 GRPEL1Q9HAV7 217 aa18.25■□□□□ 0.51
SCAMP4-202ENST00000409472 SLC27A2O14975 620 aa18.24■□□□□ 0.51
SCAMP4-202ENST00000409472 CAVIN1Q6NZI2 390 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-202ENST00000409472 RBM27Q9P2N5 1060 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-202ENST00000409472 KCNJ4P48050 445 aa18.24■□□□□ 0.51
SCAMP4-202ENST00000409472 ZSWIM6Q9HCJ5 1215 aa18.24■□□□□ 0.51
SCAMP4-202ENST00000409472 WNK3Q9BYP7 1800 aa18.24■□□□□ 0.51
SCAMP4-202ENST00000409472 JCADQ9P266 1359 aa18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 PLCH1Q4KWH8 1693 aa18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 NCLP19338 710 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 PTMSP20962 102 aa18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 FAM89AQ96GI7 184 aa18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 NEUROD6Q96NK8 337 aa18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 LIMCH1Q9UPQ0 1083 aa18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 BCL9O00512 1426 aa18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 HLFQ16534 295 aa18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 SYTL4Q96C24 671 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 PDRG1Q9NUG6 133 aa18.23■□□□□ 0.51
SCAMP4-202ENST00000409472 TCHHQ07283 1943 aa18.22■□□□□ 0.51
SCAMP4-202ENST00000409472 DOT1LQ8TEK3 1739 aa18.22■□□□□ 0.51
SCAMP4-202ENST00000409472 HIP1O00291 1037 aa18.22■□□□□ 0.51
SCAMP4-202ENST00000409472 TCIRG1Q13488 830 aa18.22■□□□□ 0.51
SCAMP4-202ENST00000409472 HAUS7Q99871 368 aa18.22■□□□□ 0.51
SCAMP4-202ENST00000409472 GDPD2Q9HCC8 539 aa18.22■□□□□ 0.51
SCAMP4-202ENST00000409472 GPTP24298 496 aa18.22■□□□□ 0.51
SCAMP4-202ENST00000409472 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
SCAMP4-202ENST00000409472 LRP6O75581 1613 aa18.21■□□□□ 0.51
SCAMP4-202ENST00000409472 COL22A1Q8NFW1 1626 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-202ENST00000409472 TAF5LO75529 589 aa18.21■□□□□ 0.51
SCAMP4-202ENST00000409472 AHDC1Q5TGY3 1603 aaPredicted RBP18.2■□□□□ 0.5
SCAMP4-202ENST00000409472 EYA2O00167 538 aa18.2■□□□□ 0.5
SCAMP4-202ENST00000409472 MRE11P49959 708 aa18.2■□□□□ 0.5
SCAMP4-202ENST00000409472 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
SCAMP4-202ENST00000409472 ZBTB1Q9Y2K1 713 aa18.2■□□□□ 0.5
SCAMP4-202ENST00000409472 CYP46A1Q9Y6A2 500 aa18.2■□□□□ 0.5
SCAMP4-202ENST00000409472 ME3Q16798 604 aa18.2■□□□□ 0.5
SCAMP4-202ENST00000409472 VPS53Q5VIR6 699 aa18.2■□□□□ 0.5
SCAMP4-202ENST00000409472 GOLIM4O00461 696 aa18.19■□□□□ 0.5
SCAMP4-202ENST00000409472 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-202ENST00000409472 TM6SF1Q9BZW5 370 aa18.19■□□□□ 0.5
SCAMP4-202ENST00000409472 TPCN1Q9ULQ1 816 aa18.19■□□□□ 0.5
SCAMP4-202ENST00000409472 ADAMTS2O95450 1211 aa18.19■□□□□ 0.5
SCAMP4-202ENST00000409472 ZSCAN23Q3MJ62 389 aa18.19■□□□□ 0.5
SCAMP4-202ENST00000409472 A0A1B0GUL7 405 aa18.18■□□□□ 0.5
SCAMP4-202ENST00000409472 IL15P40933 162 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-202ENST00000409472 KIF6Q6ZMV9 814 aa18.18■□□□□ 0.5
SCAMP4-202ENST00000409472 CYP19A1P11511 503 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-202ENST00000409472 ADORA1P30542 326 aa18.18■□□□□ 0.5
SCAMP4-202ENST00000409472 PDCL3Q9H2J4 239 aa18.18■□□□□ 0.5
SCAMP4-202ENST00000409472 TMEM63CQ9P1W3 806 aa18.18■□□□□ 0.5
SCAMP4-202ENST00000409472 MAP3K15Q6ZN16 1313 aa18.17■□□□□ 0.5
SCAMP4-202ENST00000409472 SYT1P21579 422 aa18.17■□□□□ 0.5
SCAMP4-202ENST00000409472 STARD3NLO95772 234 aa18.17■□□□□ 0.5
SCAMP4-202ENST00000409472 TPM2P07951 284 aa18.17■□□□□ 0.5
SCAMP4-202ENST00000409472 KBTBD3Q8NAB2 608 aa18.17■□□□□ 0.5
SCAMP4-202ENST00000409472 SLIT2O94813 1529 aa18.16■□□□□ 0.5
SCAMP4-202ENST00000409472 ANKRD36CQ5JPF3 1778 aa18.16■□□□□ 0.5
SCAMP4-202ENST00000409472 A0A0G2JLW4 131 aa18.16■□□□□ 0.5
SCAMP4-202ENST00000409472 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-202ENST00000409472 PAG1Q9NWQ8 432 aa18.16■□□□□ 0.5
SCAMP4-202ENST00000409472 RIC1Q4ADV7 1423 aa18.16■□□□□ 0.5
SCAMP4-202ENST00000409472 GADD45BO75293 160 aaPredicted RBP18.16■□□□□ 0.5
SCAMP4-202ENST00000409472 GIGYF2Q6Y7W6 1299 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-202ENST00000409472 NRAPQ86VF7 1730 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 WDR33Q9C0J8 1336 aaKnown RBP18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 NUP98P52948 1817 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 A0A0G2JS52 829 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 PCCAP05165 728 aaPredicted RBP18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 GJB2P29033 226 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 TOB2Q14106 344 aaPredicted RBP18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 SMC3Q9UQE7 1217 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 RFX7Q2KHR2 1363 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 EXOC5O00471 708 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 RPS6KB1P23443 525 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 CCDC57Q2TAC2 916 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 USPL1Q5W0Q7 1092 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 NLRP10Q86W26 655 aa18.15■□□□□ 0.5
SCAMP4-202ENST00000409472 PALLDQ8WX93 1383 aa18.14■□□□□ 0.5
SCAMP4-202ENST00000409472 CIAO1O76071 339 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms