RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 Q6ZUG5 572 aa19.93■□□□□ 0.78
SYNC-202ENST00000409190 UBE3BQ7Z3V4 1068 aa19.93■□□□□ 0.78
SYNC-202ENST00000409190 ANKRD24Q8TF21 1146 aa19.93■□□□□ 0.78
SYNC-202ENST00000409190 ZNF165P49910 485 aa19.93■□□□□ 0.78
SYNC-202ENST00000409190 TFCP2Q12800 502 aa19.93■□□□□ 0.78
SYNC-202ENST00000409190 LINS1Q8NG48 757 aa19.93■□□□□ 0.78
SYNC-202ENST00000409190 IL17RAQ96F46 866 aa19.93■□□□□ 0.78
SYNC-202ENST00000409190 IGKV5-2P06315 115 aa19.92■□□□□ 0.78
SYNC-202ENST00000409190 RAB11FIP4Q86YS3 637 aa19.92■□□□□ 0.78
SYNC-202ENST00000409190 PRIMPOLQ96LW4 560 aa19.92■□□□□ 0.78
SYNC-202ENST00000409190 FAM208AQ9UK61 1670 aaKnown RBP19.92■□□□□ 0.78
SYNC-202ENST00000409190 DDX58O95786 925 aaKnown RBP19.92■□□□□ 0.78
SYNC-202ENST00000409190 NEXNQ0ZGT2 675 aa19.92■□□□□ 0.78
SYNC-202ENST00000409190 ARID5BQ14865 1188 aa19.92■□□□□ 0.78
SYNC-202ENST00000409190 CEMIPQ8WUJ3 1361 aa19.92■□□□□ 0.78
SYNC-202ENST00000409190 PDCP20941 246 aa19.92■□□□□ 0.78
SYNC-202ENST00000409190 TM6SF1Q9BZW5 370 aa19.92■□□□□ 0.78
SYNC-202ENST00000409190 AXIN2Q9Y2T1 843 aa19.92■□□□□ 0.78
SYNC-202ENST00000409190 PGBD1Q96JS3 809 aa19.91■□□□□ 0.78
SYNC-202ENST00000409190 NCOA5Q9HCD5 579 aaKnown RBP19.91■□□□□ 0.78
SYNC-202ENST00000409190 BABAM1Q9NWV8 329 aa19.91■□□□□ 0.78
SYNC-202ENST00000409190 NLRP2Q9NX02 1062 aa19.91■□□□□ 0.78
SYNC-202ENST00000409190 EPB41L2O43491 1005 aaKnown RBP19.91■□□□□ 0.78
SYNC-202ENST00000409190 ALDH1L1O75891 902 aa19.91■□□□□ 0.78
SYNC-202ENST00000409190 U2AF2P26368 475 aaKnown RBP eCLIP19.91■□□□□ 0.78
SYNC-202ENST00000409190 ATP2B3Q16720 1220 aa19.91■□□□□ 0.78
SYNC-202ENST00000409190 NFATC2IPQ8NCF5 419 aa19.91■□□□□ 0.78
SYNC-202ENST00000409190 DBNDD2Q9BQY9 259 aa19.91■□□□□ 0.78
SYNC-202ENST00000409190 FILIP1Q7Z7B0 1213 aa19.91■□□□□ 0.78
SYNC-202ENST00000409190 DIP2AQ14689 1571 aa19.9■□□□□ 0.78
SYNC-202ENST00000409190 PIK3C2AO00443 1686 aa19.9■□□□□ 0.78
SYNC-202ENST00000409190 A0A0G2JLW4 131 aa19.9■□□□□ 0.78
SYNC-202ENST00000409190 GCP02774 474 aa19.9■□□□□ 0.78
SYNC-202ENST00000409190 CCDC94Q9BW85 323 aaPredicted RBP19.9■□□□□ 0.78
SYNC-202ENST00000409190 DBNLQ9UJU6 430 aaKnown RBP19.9■□□□□ 0.78
SYNC-202ENST00000409190 PDCL2Q8N4E4 241 aa19.89■□□□□ 0.78
SYNC-202ENST00000409190 NEK1Q96PY6 1258 aa19.89■□□□□ 0.78
SYNC-202ENST00000409190 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.89■□□□□ 0.78
SYNC-202ENST00000409190 V9GYY5 206 aaPredicted RBP19.89■□□□□ 0.78
SYNC-202ENST00000409190 NPHP1O15259 732 aa19.89■□□□□ 0.77
SYNC-202ENST00000409190 MTX1Q13505 466 aa19.89■□□□□ 0.77
SYNC-202ENST00000409190 SCAND2PQ9GZW5 306 aaPredicted RBP19.89■□□□□ 0.77
SYNC-202ENST00000409190 TAF5LO75529 589 aa19.88■□□□□ 0.77
SYNC-202ENST00000409190 CLIP2Q9UDT6 1046 aa19.88■□□□□ 0.77
SYNC-202ENST00000409190 ZNF330Q9Y3S2 320 aaPredicted RBP19.88■□□□□ 0.77
SYNC-202ENST00000409190 USP42Q9H9J4 1324 aaKnown RBP19.88■□□□□ 0.77
SYNC-202ENST00000409190 FMN2Q9NZ56 1722 aa19.88■□□□□ 0.77
SYNC-202ENST00000409190 APOBRQ0VD83 1088 aa19.88■□□□□ 0.77
SYNC-202ENST00000409190 TRMT1Q9NXH9 659 aaKnown RBP19.88■□□□□ 0.77
SYNC-202ENST00000409190 NWD1Q149M9 1564 aa19.88■□□□□ 0.77
SYNC-202ENST00000409190 PXDNLA1KZ92 1463 aa19.88■□□□□ 0.77
SYNC-202ENST00000409190 TPD52L1Q16890 204 aaPredicted RBP19.87■□□□□ 0.77
SYNC-202ENST00000409190 MTERF4Q7Z6M4 381 aaKnown RBP19.87■□□□□ 0.77
SYNC-202ENST00000409190 SYTL4Q96C24 671 aaPredicted RBP19.87■□□□□ 0.77
SYNC-202ENST00000409190 CCDC85AQ96PX6 553 aaPredicted RBP19.87■□□□□ 0.77
SYNC-202ENST00000409190 SPTLC3Q9NUV7 552 aa19.87■□□□□ 0.77
SYNC-202ENST00000409190 USP16Q9Y5T5 823 aa19.87■□□□□ 0.77
SYNC-202ENST00000409190 HIP1O00291 1037 aa19.87■□□□□ 0.77
SYNC-202ENST00000409190 PXDNQ92626 1479 aa19.87■□□□□ 0.77
SYNC-202ENST00000409190 GOLGA6L19H0YKK7 550 aa19.87■□□□□ 0.77
SYNC-202ENST00000409190 HOXB7P09629 217 aa19.87■□□□□ 0.77
SYNC-202ENST00000409190 OTUD7BQ6GQQ9 843 aa19.87■□□□□ 0.77
SYNC-202ENST00000409190 NALCNQ8IZF0 1738 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 CYP21A2P08686 494 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 CSB-PGBD3P0DP91 1061 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 ANKRD1Q15327 319 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 CCDC144BQ3MJ40 725 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 CCDC144CPQ8IYA2 1237 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 FMNL2Q96PY5 1086 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 UBR1Q8IWV7 1749 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 GOLIM4O00461 696 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 DDX21Q9NR30 783 aaKnown RBP eCLIP19.86■□□□□ 0.77
SYNC-202ENST00000409190 TNNT1P13805 278 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 NPHP3Q7Z494 1330 aa19.86■□□□□ 0.77
SYNC-202ENST00000409190 NEURL1BA8MQ27 555 aa19.85■□□□□ 0.77
SYNC-202ENST00000409190 TIMM10P62072 90 aa19.85■□□□□ 0.77
SYNC-202ENST00000409190 C11orf57Q6ZUT1 292 aaPredicted RBP19.85■□□□□ 0.77
SYNC-202ENST00000409190 DDX17Q92841 729 aaKnown RBP19.85■□□□□ 0.77
SYNC-202ENST00000409190 BECN2A8MW95 431 aa19.85■□□□□ 0.77
SYNC-202ENST00000409190 GCKRQ14397 625 aa19.85■□□□□ 0.77
SYNC-202ENST00000409190 HSP90AB3PQ58FF7 597 aa19.85■□□□□ 0.77
SYNC-202ENST00000409190 CACTINQ8WUQ7 758 aaKnown RBP19.85■□□□□ 0.77
SYNC-202ENST00000409190 ZNF496Q96IT1 587 aaPredicted RBP19.85■□□□□ 0.77
SYNC-202ENST00000409190 TUBGCP6Q96RT7 1819 aa19.85■□□□□ 0.77
SYNC-202ENST00000409190 A0A087WZG4 1122 aa19.84■□□□□ 0.77
SYNC-202ENST00000409190 ZNF75DP51815 510 aa19.84■□□□□ 0.77
SYNC-202ENST00000409190 SCRN1Q12765 414 aa19.84■□□□□ 0.77
SYNC-202ENST00000409190 CLSTN2Q9H4D0 955 aa19.84■□□□□ 0.77
SYNC-202ENST00000409190 TOPAZ1Q8N9V7 1692 aa19.84■□□□□ 0.77
SYNC-202ENST00000409190 COL15A1P39059 1388 aa19.84■□□□□ 0.77
SYNC-202ENST00000409190 ME1P48163 572 aa19.84■□□□□ 0.77
SYNC-202ENST00000409190 CHMP4AQ9BY43 222 aa19.84■□□□□ 0.77
SYNC-202ENST00000409190 HAND2P61296 217 aa19.83■□□□□ 0.77
SYNC-202ENST00000409190 PDIA6Q15084 440 aa19.83■□□□□ 0.77
SYNC-202ENST00000409190 AMOTQ4VCS5 1084 aa19.83■□□□□ 0.77
SYNC-202ENST00000409190 TNNI3KQ59H18 835 aa19.83■□□□□ 0.77
SYNC-202ENST00000409190 ZSCAN25Q6NSZ9 544 aa19.83■□□□□ 0.77
SYNC-202ENST00000409190 ZNF790Q6PG37 636 aa19.83■□□□□ 0.77
SYNC-202ENST00000409190 CCAR1Q8IX12 1150 aaKnown RBP19.83■□□□□ 0.77
SYNC-202ENST00000409190 GTF3C6Q969F1 213 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms