RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 PIP4K2BP78356 416 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 CCDC57Q2TAC2 916 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 ZBTB38Q8NAP3 1195 aaPredicted RBP20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 ARXQ96QS3 562 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 SPATA31A1Q5TZJ5 1347 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 ADAMTS2O95450 1211 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 AK2P54819 239 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 RNF20Q5VTR2 975 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 DNAJC2Q99543 621 aaKnown RBP20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 LIMCH1Q9UPQ0 1083 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 ZDHHC9Q9Y397 364 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 KAT6BQ8WYB5 2073 aa20.68■□□□□ 0.9
LRRTM1-202ENST00000409148 JCADQ9P266 1359 aa20.67■□□□□ 0.9
LRRTM1-202ENST00000409148 ZNF609O15014 1411 aa20.67■□□□□ 0.9
LRRTM1-202ENST00000409148 GOLGA6L3A6NEY3 463 aa20.67■□□□□ 0.9
LRRTM1-202ENST00000409148 CREB3L3Q68CJ9 461 aa20.67■□□□□ 0.9
LRRTM1-202ENST00000409148 MCTP1Q6DN14 999 aa20.67■□□□□ 0.9
LRRTM1-202ENST00000409148 JAKMIP1Q96N16 626 aaKnown RBP20.67■□□□□ 0.9
LRRTM1-202ENST00000409148 NEUROD6Q96NK8 337 aa20.67■□□□□ 0.9
LRRTM1-202ENST00000409148 SLC4A9Q96Q91 983 aa20.67■□□□□ 0.9
LRRTM1-202ENST00000409148 CYP46A1Q9Y6A2 500 aa20.67■□□□□ 0.9
LRRTM1-202ENST00000409148 VPS53Q5VIR6 699 aa20.66■□□□□ 0.9
LRRTM1-202ENST00000409148 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
LRRTM1-202ENST00000409148 ZSWIM6Q9HCJ5 1215 aa20.66■□□□□ 0.9
LRRTM1-202ENST00000409148 PRIM1P49642 420 aaKnown RBP20.66■□□□□ 0.9
LRRTM1-202ENST00000409148 DDB1Q16531 1140 aa20.66■□□□□ 0.9
LRRTM1-202ENST00000409148 LRRC24Q50LG9 513 aa20.66■□□□□ 0.9
LRRTM1-202ENST00000409148 TICAM2Q86XR7 235 aa20.66■□□□□ 0.9
LRRTM1-202ENST00000409148 ZNF594Q96JF6 807 aaPredicted RBP20.66■□□□□ 0.9
LRRTM1-202ENST00000409148 CDHR2Q9BYE9 1310 aa20.66■□□□□ 0.9
LRRTM1-202ENST00000409148 PSMA5P28066 241 aa20.65■□□□□ 0.9
LRRTM1-202ENST00000409148 PDRG1Q9NUG6 133 aa20.65■□□□□ 0.9
LRRTM1-202ENST00000409148 BRD1O95696 1058 aa20.65■□□□□ 0.9
LRRTM1-202ENST00000409148 FAM89AQ96GI7 184 aa20.65■□□□□ 0.9
LRRTM1-202ENST00000409148 CEP126Q9P2H0 1117 aa20.65■□□□□ 0.9
LRRTM1-202ENST00000409148 ISY1Q9ULR0 285 aaKnown RBP20.65■□□□□ 0.9
LRRTM1-202ENST00000409148 ZBTB1Q9Y2K1 713 aa20.65■□□□□ 0.9
LRRTM1-202ENST00000409148 NWD2Q9ULI1 1742 aa20.64■□□□□ 0.9
LRRTM1-202ENST00000409148 FSD2A1L4K1 749 aa20.64■□□□□ 0.89
LRRTM1-202ENST00000409148 SLC27A2O14975 620 aa20.64■□□□□ 0.89
LRRTM1-202ENST00000409148 KLHL40Q2TBA0 621 aa20.64■□□□□ 0.89
LRRTM1-202ENST00000409148 ADCK5Q3MIX3 580 aa20.64■□□□□ 0.89
LRRTM1-202ENST00000409148 RUFY3Q7L099 469 aa20.64■□□□□ 0.89
LRRTM1-202ENST00000409148 KBTBD3Q8NAB2 608 aa20.64■□□□□ 0.89
LRRTM1-202ENST00000409148 HMG20BQ9P0W2 317 aa20.64■□□□□ 0.89
LRRTM1-202ENST00000409148 PALLDQ8WX93 1383 aa20.64■□□□□ 0.89
LRRTM1-202ENST00000409148 CSF1RP07333 972 aa20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 NLRP10Q86W26 655 aa20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 SPEF2Q9C093 1822 aa20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 TIMM10P62072 90 aa20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 HLFQ16534 295 aa20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 ZNF589Q86UQ0 364 aaPredicted RBP20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 ZSCAN31Q96LW9 406 aaPredicted RBP20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 AKAP2Q9Y2D5 859 aa20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 DDX49Q9Y6V7 483 aaKnown RBP20.63■□□□□ 0.89
LRRTM1-202ENST00000409148 RPAP1Q9BWH6 1393 aaPredicted RBP20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 A0A1B0GUL7 405 aa20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 ERVV-1B6SEH8 477 aa20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 TAF5LO75529 589 aa20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 IFIT5Q13325 482 aaKnown RBP20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 TAF7LQ5H9L4 462 aa20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 DDX46Q7L014 1031 aaKnown RBP20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 PAG1Q9NWQ8 432 aa20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 NUP98P52948 1817 aa20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 PUS3Q9BZE2 481 aaKnown RBP20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 SH2B1Q9NRF2 756 aaPredicted RBP20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 NDUFB9Q9Y6M9 179 aa20.62■□□□□ 0.89
LRRTM1-202ENST00000409148 CPA1P15085 419 aa20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 GPTP24298 496 aa20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 MCMDC2Q4G0Z9 681 aa20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 RRAGDQ9NQL2 400 aaPredicted RBP20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 CCDC9Q9Y3X0 531 aaKnown RBP20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 SPATA31A5Q5VU36 1347 aa20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 SPATA31A7Q8IWB4 1347 aa20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 SH3TC1Q8TE82 1336 aa20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 WDR33Q9C0J8 1336 aaKnown RBP20.61■□□□□ 0.89
LRRTM1-202ENST00000409148 DZIP3Q86Y13 1208 aaKnown RBP20.6■□□□□ 0.89
LRRTM1-202ENST00000409148 LMBRD1Q9NUN5 540 aa20.6■□□□□ 0.89
LRRTM1-202ENST00000409148 MYH3P11055 1940 aa20.6■□□□□ 0.89
LRRTM1-202ENST00000409148 IFIT1P09914 478 aaKnown RBP20.6■□□□□ 0.89
LRRTM1-202ENST00000409148 TSGA10IPQ3SY00 556 aa20.6■□□□□ 0.89
LRRTM1-202ENST00000409148 USPL1Q5W0Q7 1092 aa20.6■□□□□ 0.89
LRRTM1-202ENST00000409148 NUTM2BA6NNL0 878 aaPredicted RBP20.59■□□□□ 0.89
LRRTM1-202ENST00000409148 NUTM2EB1AL46 878 aaPredicted RBP20.59■□□□□ 0.89
LRRTM1-202ENST00000409148 GOLIM4O00461 696 aa20.59■□□□□ 0.89
LRRTM1-202ENST00000409148 NUTM2AQ8IVF1 878 aaPredicted RBP20.59■□□□□ 0.89
LRRTM1-202ENST00000409148 U3KPZ7 1027 aaPredicted RBP20.59■□□□□ 0.89
LRRTM1-202ENST00000409148 KRT32Q14532 448 aa20.59■□□□□ 0.89
LRRTM1-202ENST00000409148 BLOC1S2Q6QNY1 142 aa20.59■□□□□ 0.89
LRRTM1-202ENST00000409148 SLIT2O94813 1529 aa20.58■□□□□ 0.89
LRRTM1-202ENST00000409148 ANKRD1Q15327 319 aa20.58■□□□□ 0.89
LRRTM1-202ENST00000409148 CCDC158Q5M9N0 1113 aa20.58■□□□□ 0.89
LRRTM1-202ENST00000409148 BARGINQ6ZT62 677 aa20.58■□□□□ 0.89
LRRTM1-202ENST00000409148 HELLSQ9NRZ9 838 aa20.58■□□□□ 0.89
LRRTM1-202ENST00000409148 CTSWP56202 376 aa20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 FOXD4L5Q5VV16 416 aaPredicted RBP20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 FOXD4L4Q8WXT5 416 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms