RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 AACSQ86V21 672 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 PI4K2BQ8TCG2 481 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 JARID2Q92833 1246 aaPredicted RBP12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 IPO9Q96P70 1041 aaKnown RBP12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 LAMB2P55268 1798 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 NTSR2O95665 410 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 ATP5JP18859 108 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 RFC4P35249 363 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 TNNI3KQ59H18 835 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 ATG9AQ7Z3C6 839 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 NUTM1Q86Y26 1132 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 EAF2Q96CJ1 260 aaPredicted RBP12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 C22orf23Q9BZE7 217 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 SIL1Q9H173 461 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 FPGT-TNNI3KV9GXZ4 949 aa12.59□□□□□ -0.39
SNORD88C-201ENST00000408061 TRIM6-TRIM34B2RNG4 842 aa12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 TRIM37O94972 964 aa12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 SEC24BO95487 1268 aa12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 TFCP2Q12800 502 aa12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 SF3B3Q15393 1217 aaKnown RBP12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 RTL5Q5HYW3 569 aaPredicted RBP12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 RUFY2Q8WXA3 655 aa12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 AK9Q5TCS8 1911 aa12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.4
SNORD88C-201ENST00000408061 ITGA6P23229 1130 aa12.57□□□□□ -0.4
SNORD88C-201ENST00000408061 LDHAL6AQ6ZMR3 332 aa12.57□□□□□ -0.4
SNORD88C-201ENST00000408061 RIPOR2Q9Y4F9 1068 aa12.57□□□□□ -0.4
SNORD88C-201ENST00000408061 MROH5Q6ZUA9 1318 aa12.57□□□□□ -0.4
SNORD88C-201ENST00000408061 GTF2E1P29083 439 aaPredicted RBP12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 TXNRD1Q16881 649 aa12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 USPL1Q5W0Q7 1092 aa12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 KLHDC4Q8TBB5 520 aa12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 RILPL2Q969X0 211 aa12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 CDC5LQ99459 802 aaKnown RBP12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 LRRC4BQ9NT99 713 aa12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 UBR3Q6ZT12 1888 aa12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
SNORD88C-201ENST00000408061 RIC1Q4ADV7 1423 aa12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 COL24A1Q17RW2 1714 aa12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 DDX60Q8IY21 1712 aaKnown RBP12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 CHMLP26374 656 aa12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 MFAP1P55081 439 aaKnown RBP12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 BECN1Q14457 450 aa12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 LRRFIP1Q32MZ4 808 aaKnown RBP12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 ZNF512BQ96KM6 892 aaPredicted RBP12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 NLRP3Q96P20 1036 aa12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 CCDC8Q9H0W5 538 aaPredicted RBP12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 GREM2Q9H772 168 aa12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
SNORD88C-201ENST00000408061 APBA3O96018 575 aa12.54□□□□□ -0.4
SNORD88C-201ENST00000408061 IGHMBP2P38935 993 aaKnown RBP12.54□□□□□ -0.4
SNORD88C-201ENST00000408061 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
SNORD88C-201ENST00000408061 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
SNORD88C-201ENST00000408061 MPHOSPH8Q99549 860 aa12.54□□□□□ -0.4
SNORD88C-201ENST00000408061 ESYT1Q9BSJ8 1104 aa12.54□□□□□ -0.4
SNORD88C-201ENST00000408061 BCL11AQ9H165 835 aa12.54□□□□□ -0.4
SNORD88C-201ENST00000408061 DAXXQ9UER7 740 aaPredicted RBP12.54□□□□□ -0.4
SNORD88C-201ENST00000408061 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
SNORD88C-201ENST00000408061 SPEF2Q9C093 1822 aa12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 PDE8BO95263 885 aa12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 KCNQ4P56696 695 aa12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 LRRC24Q50LG9 513 aa12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 NBPF5PQ86XG9 351 aaPredicted RBP12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 SYNE4Q8N205 404 aa12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 HAUS7Q99871 368 aa12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 USP26Q9BXU7 913 aa12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 RGS17Q9UGC6 210 aaPredicted RBP12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 DBNLQ9UJU6 430 aaKnown RBP12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 C4AP0C0L4 1744 aa12.53□□□□□ -0.4
SNORD88C-201ENST00000408061 A0A1B0GUL7 405 aa12.52□□□□□ -0.41
SNORD88C-201ENST00000408061 HCLS1P14317 486 aaPredicted RBP12.52□□□□□ -0.41
SNORD88C-201ENST00000408061 MCCP23508 829 aa12.52□□□□□ -0.41
SNORD88C-201ENST00000408061 METTL24Q5JXM2 366 aa12.52□□□□□ -0.41
SNORD88C-201ENST00000408061 PROM2Q8N271 834 aa12.52□□□□□ -0.41
SNORD88C-201ENST00000408061 ZNF594Q96JF6 807 aaPredicted RBP12.52□□□□□ -0.41
SNORD88C-201ENST00000408061 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.41
SNORD88C-201ENST00000408061 RAD50Q92878 1312 aa12.52□□□□□ -0.41
SNORD88C-201ENST00000408061 ZNF609O15014 1411 aa12.52□□□□□ -0.41
SNORD88C-201ENST00000408061 ZBTB22O15209 634 aa12.51□□□□□ -0.41
SNORD88C-201ENST00000408061 ANAPC15P60006 121 aa12.51□□□□□ -0.41
SNORD88C-201ENST00000408061 ATP2B3Q16720 1220 aa12.51□□□□□ -0.41
SNORD88C-201ENST00000408061 ERFEQ4G0M1 354 aa12.51□□□□□ -0.41
SNORD88C-201ENST00000408061 GORABQ5T7V8 394 aa12.51□□□□□ -0.41
SNORD88C-201ENST00000408061 POTEAQ6S8J7 498 aa12.51□□□□□ -0.41
SNORD88C-201ENST00000408061 ANKRD18AQ8IVF6 992 aa12.51□□□□□ -0.41
SNORD88C-201ENST00000408061 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
SNORD88C-201ENST00000408061 LPIN2Q92539 896 aa12.51□□□□□ -0.41
SNORD88C-201ENST00000408061 DBNDD2Q9BQY9 259 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms