RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 SLC34A2O95436 690 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 C3orf67Q6ZVT6 689 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 DDX46Q7L014 1031 aaKnown RBP16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 TMC4Q7Z404 712 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 PLEKHF1Q96S99 279 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 BABAM1Q9NWV8 329 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 TSPYL4Q9UJ04 414 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 KDM3BQ7LBC6 1761 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 ABCC4O15439 1325 aa16.15■□□□□ 0.18
APOBEC3B-204ENST00000407298 H7C1D1 291 aa16.14■□□□□ 0.17
APOBEC3B-204ENST00000407298 EIF2S2P20042 333 aaKnown RBP16.14■□□□□ 0.17
APOBEC3B-204ENST00000407298 RAD17O75943 681 aa16.13■□□□□ 0.17
APOBEC3B-204ENST00000407298 THUMPD2Q9BTF0 503 aaKnown RBP16.13■□□□□ 0.17
APOBEC3B-204ENST00000407298 GLIS2Q9BZE0 524 aaPredicted RBP16.13■□□□□ 0.17
APOBEC3B-204ENST00000407298 NOGQ13253 232 aa16.12■□□□□ 0.17
APOBEC3B-204ENST00000407298 ZNF408Q9H9D4 720 aa16.12■□□□□ 0.17
APOBEC3B-204ENST00000407298 CNOT7Q9UIV1 285 aaKnown RBP16.12■□□□□ 0.17
APOBEC3B-204ENST00000407298 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
APOBEC3B-204ENST00000407298 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
APOBEC3B-204ENST00000407298 GRAPQ13588 217 aa16.11■□□□□ 0.17
APOBEC3B-204ENST00000407298 PDIA6Q15084 440 aa16.11■□□□□ 0.17
APOBEC3B-204ENST00000407298 NLRP10Q86W26 655 aa16.11■□□□□ 0.17
APOBEC3B-204ENST00000407298 GRAPLQ8TC17 118 aaPredicted RBP16.11■□□□□ 0.17
APOBEC3B-204ENST00000407298 DPF2Q92785 391 aa16.11■□□□□ 0.17
APOBEC3B-204ENST00000407298 TRMT112Q9UI30 125 aaKnown RBP16.11■□□□□ 0.17
APOBEC3B-204ENST00000407298 HCLS1P14317 486 aaPredicted RBP16.1■□□□□ 0.17
APOBEC3B-204ENST00000407298 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
APOBEC3B-204ENST00000407298 COPS6Q7L5N1 327 aa16.1■□□□□ 0.17
APOBEC3B-204ENST00000407298 LRP10Q7Z4F1 713 aa16.1■□□□□ 0.17
APOBEC3B-204ENST00000407298 SLC51AQ86UW1 340 aa16.1■□□□□ 0.17
APOBEC3B-204ENST00000407298 CFAP44Q96MT7 982 aa16.1■□□□□ 0.17
APOBEC3B-204ENST00000407298 MCOLN1Q9GZU1 580 aa16.1■□□□□ 0.17
APOBEC3B-204ENST00000407298 SH3TC1Q8TE82 1336 aa16.1■□□□□ 0.17
APOBEC3B-204ENST00000407298 HIRAP54198 1017 aaPredicted RBP16.09■□□□□ 0.17
APOBEC3B-204ENST00000407298 TCIRG1Q13488 830 aa16.09■□□□□ 0.17
APOBEC3B-204ENST00000407298 HUNKP57058 714 aa16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 RIPK4P57078 832 aa16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 AIMP1Q12904 312 aaKnown RBP16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 DGKZQ13574 1117 aa16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 WASHC4Q2M389 1173 aa16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 USP48Q86UV5 1035 aa16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 MICALL2Q8IY33 904 aa16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 C2orf69Q8N8R5 385 aa16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 TRPM4Q8TD43 1214 aa16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 CCDC102AQ96A19 550 aa16.08■□□□□ 0.16
APOBEC3B-204ENST00000407298 RPS12P25398 132 aaKnown RBP16.07■□□□□ 0.16
APOBEC3B-204ENST00000407298 PROSER3Q2NL68 480 aa16.07■□□□□ 0.16
APOBEC3B-204ENST00000407298 XAGE3Q8WTP9 111 aa16.07■□□□□ 0.16
APOBEC3B-204ENST00000407298 ANKRD36CQ5JPF3 1778 aa16.06■□□□□ 0.16
APOBEC3B-204ENST00000407298 KRT26Q7Z3Y9 468 aa16.06■□□□□ 0.16
APOBEC3B-204ENST00000407298 DCPSQ96C86 337 aaKnown RBP16.06■□□□□ 0.16
APOBEC3B-204ENST00000407298 EYA3Q99504 573 aa16.06■□□□□ 0.16
APOBEC3B-204ENST00000407298 SAGE1Q9NXZ1 904 aa16.06■□□□□ 0.16
APOBEC3B-204ENST00000407298 YDJCA8MPS7 323 aa16.05■□□□□ 0.16
APOBEC3B-204ENST00000407298 ANXA1P04083 346 aa16.05■□□□□ 0.16
APOBEC3B-204ENST00000407298 RGMBQ6NW40 437 aa16.05■□□□□ 0.16
APOBEC3B-204ENST00000407298 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
APOBEC3B-204ENST00000407298 PCDH10Q9P2E7 1040 aa16.05■□□□□ 0.16
APOBEC3B-204ENST00000407298 NSFL1CQ9UNZ2 370 aaKnown RBP16.05■□□□□ 0.16
APOBEC3B-204ENST00000407298 CASP8AP2Q9UKL3 1982 aa16.05■□□□□ 0.16
APOBEC3B-204ENST00000407298 C6orf229H3BNL8 230 aa16.04■□□□□ 0.16
APOBEC3B-204ENST00000407298 PSMD14O00487 310 aa16.04■□□□□ 0.16
APOBEC3B-204ENST00000407298 HOXD11P31277 338 aaPredicted RBP16.04■□□□□ 0.16
APOBEC3B-204ENST00000407298 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
APOBEC3B-204ENST00000407298 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
APOBEC3B-204ENST00000407298 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
APOBEC3B-204ENST00000407298 SF3B3Q15393 1217 aaKnown RBP16.03■□□□□ 0.16
APOBEC3B-204ENST00000407298 SAMD7Q7Z3H4 446 aa16.03■□□□□ 0.16
APOBEC3B-204ENST00000407298 PLBD2Q8NHP8 589 aa16.03■□□□□ 0.16
APOBEC3B-204ENST00000407298 TMPOP42166 694 aaKnown RBP16.02■□□□□ 0.16
APOBEC3B-204ENST00000407298 ZNF157P51786 506 aaPredicted RBP16.02■□□□□ 0.16
APOBEC3B-204ENST00000407298 TBC1D10BQ4KMP7 808 aaPredicted RBP16.02■□□□□ 0.16
APOBEC3B-204ENST00000407298 ANKRD13DQ6ZTN6 518 aa16.02■□□□□ 0.16
APOBEC3B-204ENST00000407298 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
APOBEC3B-204ENST00000407298 DBNDD1Q9H9R9 158 aa16.02■□□□□ 0.16
APOBEC3B-204ENST00000407298 LAMB2P55268 1798 aa16.01■□□□□ 0.15
APOBEC3B-204ENST00000407298 SHTN1A0MZ66 631 aa16.01■□□□□ 0.15
APOBEC3B-204ENST00000407298 G3V3G9 751 aa16.01■□□□□ 0.15
APOBEC3B-204ENST00000407298 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
APOBEC3B-204ENST00000407298 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
APOBEC3B-204ENST00000407298 SULF1Q8IWU6 871 aa16.01■□□□□ 0.15
APOBEC3B-204ENST00000407298 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
APOBEC3B-204ENST00000407298 FAM155AB1AL88 458 aaPredicted RBP16■□□□□ 0.15
APOBEC3B-204ENST00000407298 CHL1O00533 1208 aa16■□□□□ 0.15
APOBEC3B-204ENST00000407298 ECE2O60344 883 aa16■□□□□ 0.15
APOBEC3B-204ENST00000407298 HOXB7P09629 217 aa16■□□□□ 0.15
APOBEC3B-204ENST00000407298 RBM26Q5T8P6 1007 aaKnown RBP16■□□□□ 0.15
APOBEC3B-204ENST00000407298 FAM89AQ96GI7 184 aa16■□□□□ 0.15
APOBEC3B-204ENST00000407298 ZIC5Q96T25 663 aa16■□□□□ 0.15
APOBEC3B-204ENST00000407298 DBF4Q9UBU7 674 aaPredicted RBP16■□□□□ 0.15
APOBEC3B-204ENST00000407298 POLLQ9UGP5 575 aa16■□□□□ 0.15
APOBEC3B-204ENST00000407298 RPS8P62241 208 aaKnown RBP15.99■□□□□ 0.15
APOBEC3B-204ENST00000407298 GPSM2P81274 684 aa15.99■□□□□ 0.15
APOBEC3B-204ENST00000407298 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
APOBEC3B-204ENST00000407298 TRIM28Q13263 835 aaKnown RBP15.99■□□□□ 0.15
APOBEC3B-204ENST00000407298 KIF4BQ2VIQ3 1234 aa15.99■□□□□ 0.15
APOBEC3B-204ENST00000407298 HDGFL1Q5TGJ6 251 aa15.99■□□□□ 0.15
APOBEC3B-204ENST00000407298 CELF1Q92879 486 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms