RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 ZSCAN16Q9H4T2 348 aaPredicted RBP5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 HELLSQ9NRZ9 838 aa5.56□□□□□ -1.52
PCDH11X-207ENST00000406881 ERBB3P21860 1342 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 PREX1Q8TCU6 1659 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 RNF113AO15541 343 aaKnown RBP5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 GNAT2P19087 354 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 GSTO1P78417 241 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 NMIQ13287 307 aaPredicted RBP5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 MAP3K11Q16584 847 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 KLHL40Q2TBA0 621 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 BEND3Q5T5X7 828 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 NBPF5PQ86XG9 351 aaPredicted RBP5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 TMTC2Q8N394 836 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 JARID2Q92833 1246 aaPredicted RBP5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 TRIM5Q9C035 493 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 CNNM2Q9H8M5 875 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 FBXO3Q9UK99 471 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 NIP7Q9Y221 180 aaKnown RBP eCLIP5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 SSH2Q76I76 1423 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 ADAMTS13Q76LX8 1427 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 PES1O00541 588 aaKnown RBP5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 BAG3O95817 575 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 TFCP2Q12800 502 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 CCDC178Q5BJE1 867 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 CTCFLQ8NI51 663 aaPredicted RBP5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 SNRKQ9NRH2 765 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 DDX19AQ9NUU7 478 aaKnown RBP5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 ANKIB1Q9P2G1 1089 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 SLC12A7Q9Y666 1083 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 WDR17Q8IZU2 1322 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 SH3TC1Q8TE82 1336 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 NEURL1BA8MQ27 555 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 IFIT3O14879 490 aaKnown RBP5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 GJB2P29033 226 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 USP5P45974 858 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 TNNI3KQ59H18 835 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 TPTE2Q6XPS3 522 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 CEP57L1Q8IYX8 460 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 DDX11Q96FC9 970 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 SUCLG2Q96I99 432 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 KRT23Q9C075 422 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 TCEAL9Q9UHQ7 104 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 FPGT-TNNI3KV9GXZ4 949 aa5.55□□□□□ -1.52
PCDH11X-207ENST00000406881 PNMA6EA0A0J9YXQ4 647 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 GOLGA8BA8MQT2 603 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CCP110O43303 1012 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 PDE8AO60658 829 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 SEC24BO95487 1268 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CAVIN2O95810 425 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 NBPF7P0C2Y1 421 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 ST5P78524 1137 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 FILIP1LQ4L180 1135 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 ANKRD2Q9GZV1 360 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 OSBPL3Q9H4L5 887 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 REREQ9P2R6 1566 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CCDC171Q6TFL3 1326 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 GOLGA8AA7E2F4 631 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 MINDY4BA8MYZ0 360 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 SGSM2O43147 1006 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 ZSCAN22P10073 491 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 ATP2B1P20020 1258 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CEBPZQ03701 1054 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 TCIRG1Q13488 830 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 TMOD2Q9NZR1 351 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 STAP2Q9UGK3 403 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 RTCBQ9Y3I0 505 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 USP16Q9Y5T5 823 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 IBTKQ9P2D0 1353 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 SMTNL1A8MU46 457 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CLSTN1O94985 981 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 POLR3DP05423 398 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 UBE2HP62256 183 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 SSRP1Q08945 709 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 RAB3GAP1Q15042 981 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CREB3L3Q68CJ9 461 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 MFSD6Q6ZSS7 791 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CATIPQ7Z7H3 387 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 ACSBG1Q96GR2 724 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 C8orf37Q96NL8 207 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CRNKL1Q9BZJ0 848 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 MKNK2Q9HBH9 465 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CCDC87Q9NVE4 849 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 SPATA31A3Q5VYP0 1347 aa5.54□□□□□ -1.52
PCDH11X-207ENST00000406881 CBFA2T2O43439 604 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 PDE4BQ07343 736 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 IKQ13123 557 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 DNAJC10Q8IXB1 793 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 KCNQ3O43525 872 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 A1BGP04217 495 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 ATP5JP18859 108 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 KIF5BP33176 963 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 IARSP41252 1262 aaKnown RBP5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 STIM1Q13586 685 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 TMEM67Q5HYA8 995 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 PPP4R3BQ5MIZ7 849 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 FERMT3Q86UX7 667 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 ZNF444Q8N0Y2 327 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 OTUD7AQ8TE49 926 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 CDK5RAP3Q96JB5 506 aa5.53□□□□□ -1.52
PCDH11X-207ENST00000406881 ORC3Q9UBD5 711 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms