RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 ARHGAP45Q92619 1136 aa20.16■□□□□ 0.82
GDPD3-202ENST00000406256 UTYO14607 1347 aa20.16■□□□□ 0.82
GDPD3-202ENST00000406256 TRIM27P14373 513 aa20.15■□□□□ 0.82
GDPD3-202ENST00000406256 ALDH1B1P30837 517 aa20.15■□□□□ 0.82
GDPD3-202ENST00000406256 RBM17Q96I25 401 aaKnown RBP20.15■□□□□ 0.82
GDPD3-202ENST00000406256 YTHDC1Q96MU7 727 aaKnown RBP20.15■□□□□ 0.82
GDPD3-202ENST00000406256 ZNF219Q9P2Y4 722 aaPredicted RBP20.15■□□□□ 0.82
GDPD3-202ENST00000406256 GRM8O00222 908 aa20.14■□□□□ 0.81
GDPD3-202ENST00000406256 CTSWP56202 376 aa20.14■□□□□ 0.81
GDPD3-202ENST00000406256 TTLL11Q8NHH1 800 aa20.14■□□□□ 0.81
GDPD3-202ENST00000406256 KAZALD1Q96I82 304 aa20.14■□□□□ 0.81
GDPD3-202ENST00000406256 A0A1B0GUL6 1792 aa20.14■□□□□ 0.81
GDPD3-202ENST00000406256 DUOX1Q9NRD9 1551 aa20.13■□□□□ 0.81
GDPD3-202ENST00000406256 NBPF7P0C2Y1 421 aaPredicted RBP20.13■□□□□ 0.81
GDPD3-202ENST00000406256 RASSF7Q02833 373 aa20.13■□□□□ 0.81
GDPD3-202ENST00000406256 EPHA10Q5JZY3 1008 aa20.13■□□□□ 0.81
GDPD3-202ENST00000406256 ARHGAP27Q6ZUM4 889 aa20.13■□□□□ 0.81
GDPD3-202ENST00000406256 CELF1Q92879 486 aaKnown RBP20.13■□□□□ 0.81
GDPD3-202ENST00000406256 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
GDPD3-202ENST00000406256 SEC31BQ9NQW1 1179 aa20.13■□□□□ 0.81
GDPD3-202ENST00000406256 TIAM2Q8IVF5 1701 aa20.13■□□□□ 0.81
GDPD3-202ENST00000406256 FOXO4P98177 505 aa20.12■□□□□ 0.81
GDPD3-202ENST00000406256 GRAPQ13588 217 aa20.12■□□□□ 0.81
GDPD3-202ENST00000406256 GRAPLQ8TC17 118 aaPredicted RBP20.12■□□□□ 0.81
GDPD3-202ENST00000406256 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
GDPD3-202ENST00000406256 RTL9Q8NET4 1388 aa20.12■□□□□ 0.81
GDPD3-202ENST00000406256 PPEF1O14829 653 aaPredicted RBP20.11■□□□□ 0.81
GDPD3-202ENST00000406256 CSF1RP07333 972 aa20.11■□□□□ 0.81
GDPD3-202ENST00000406256 ATF7IPQ6VMQ6 1270 aa20.11■□□□□ 0.81
GDPD3-202ENST00000406256 INTS3Q68E01 1043 aaKnown RBP20.1■□□□□ 0.81
GDPD3-202ENST00000406256 DDX46Q7L014 1031 aaKnown RBP20.1■□□□□ 0.81
GDPD3-202ENST00000406256 CCDC85AQ96PX6 553 aaPredicted RBP20.1■□□□□ 0.81
GDPD3-202ENST00000406256 GREM2Q9H772 168 aa20.1■□□□□ 0.81
GDPD3-202ENST00000406256 LTBP3Q9NS15 1303 aa20.1■□□□□ 0.81
GDPD3-202ENST00000406256 HSP90B1P14625 803 aaKnown RBP20.09■□□□□ 0.81
GDPD3-202ENST00000406256 CCDC152Q4G0S7 254 aa20.09■□□□□ 0.81
GDPD3-202ENST00000406256 FRAT1Q92837 279 aaPredicted RBP20.09■□□□□ 0.81
GDPD3-202ENST00000406256 SUCLG2Q96I99 432 aa20.09■□□□□ 0.81
GDPD3-202ENST00000406256 COL4A5P29400 1685 aa20.09■□□□□ 0.81
GDPD3-202ENST00000406256 CCT4P50991 539 aaKnown RBP20.08■□□□□ 0.81
GDPD3-202ENST00000406256 CCDC93Q567U6 631 aa20.08■□□□□ 0.81
GDPD3-202ENST00000406256 ATP6V0A2Q9Y487 856 aa20.08■□□□□ 0.81
GDPD3-202ENST00000406256 BBOX1O75936 387 aa20.08■□□□□ 0.8
GDPD3-202ENST00000406256 FAM161AQ3B820 660 aa20.08■□□□□ 0.8
GDPD3-202ENST00000406256 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.8
GDPD3-202ENST00000406256 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.8
GDPD3-202ENST00000406256 IPO8O15397 1037 aaKnown RBP20.07■□□□□ 0.8
GDPD3-202ENST00000406256 RLBP1P12271 317 aa20.07■□□□□ 0.8
GDPD3-202ENST00000406256 SOGA3Q5TF21 947 aa20.07■□□□□ 0.8
GDPD3-202ENST00000406256 RCAN3Q9UKA8 241 aa20.07■□□□□ 0.8
GDPD3-202ENST00000406256 RABL6Q3YEC7 729 aaPredicted RBP20.06■□□□□ 0.8
GDPD3-202ENST00000406256 SP8Q8IXZ3 490 aa20.06■□□□□ 0.8
GDPD3-202ENST00000406256 ANKRD44Q8N8A2 993 aa20.06■□□□□ 0.8
GDPD3-202ENST00000406256 CLUAP1Q96AJ1 413 aa20.06■□□□□ 0.8
GDPD3-202ENST00000406256 RPS8P62241 208 aaKnown RBP20.05■□□□□ 0.8
GDPD3-202ENST00000406256 C9orf131Q5VYM1 1079 aa20.05■□□□□ 0.8
GDPD3-202ENST00000406256 CC2D2BQ6DHV5 1058 aa20.05■□□□□ 0.8
GDPD3-202ENST00000406256 TAOK3Q9H2K8 898 aa20.05■□□□□ 0.8
GDPD3-202ENST00000406256 FKBP4Q02790 459 aaKnown RBP eCLIP20.04■□□□□ 0.8
GDPD3-202ENST00000406256 LMBR1LQ6UX01 489 aa20.04■□□□□ 0.8
GDPD3-202ENST00000406256 RTKN2Q8IZC4 609 aa20.04■□□□□ 0.8
GDPD3-202ENST00000406256 TMEM57Q8N5G2 664 aa20.04■□□□□ 0.8
GDPD3-202ENST00000406256 PSMD1Q99460 953 aa20.04■□□□□ 0.8
GDPD3-202ENST00000406256 MEIS3Q99687 375 aa20.04■□□□□ 0.8
GDPD3-202ENST00000406256 BICC1Q9H694 974 aaKnown RBP20.04■□□□□ 0.8
GDPD3-202ENST00000406256 LMNB1P20700 586 aa20.03■□□□□ 0.8
GDPD3-202ENST00000406256 ITGA6P23229 1130 aa20.03■□□□□ 0.8
GDPD3-202ENST00000406256 TMC4Q7Z404 712 aa20.03■□□□□ 0.8
GDPD3-202ENST00000406256 YY1P25490 414 aa20.02■□□□□ 0.8
GDPD3-202ENST00000406256 RTFDC1Q9BY42 306 aaPredicted RBP20.02■□□□□ 0.8
GDPD3-202ENST00000406256 RNF181Q9P0P0 153 aa20.01■□□□□ 0.79
GDPD3-202ENST00000406256 GRIPAP1Q4V328 841 aa20■□□□□ 0.79
GDPD3-202ENST00000406256 ANKRD18AQ8IVF6 992 aa20■□□□□ 0.79
GDPD3-202ENST00000406256 DZIP1LQ8IYY4 767 aaKnown RBP20■□□□□ 0.79
GDPD3-202ENST00000406256 CDC5LQ99459 802 aaKnown RBP20■□□□□ 0.79
GDPD3-202ENST00000406256 ZNF277Q9NRM2 450 aaPredicted RBP20■□□□□ 0.79
GDPD3-202ENST00000406256 PLIN1O60240 522 aa19.99■□□□□ 0.79
GDPD3-202ENST00000406256 GPSM2P81274 684 aa19.99■□□□□ 0.79
GDPD3-202ENST00000406256 BSDC1Q9NW68 430 aaPredicted RBP19.99■□□□□ 0.79
GDPD3-202ENST00000406256 PANK1Q8TE04 598 aa19.98■□□□□ 0.79
GDPD3-202ENST00000406256 ZNF594Q96JF6 807 aaPredicted RBP19.98■□□□□ 0.79
GDPD3-202ENST00000406256 PODXL2Q9NZ53 605 aa19.98■□□□□ 0.79
GDPD3-202ENST00000406256 SCN9AQ15858 1988 aa19.98■□□□□ 0.79
GDPD3-202ENST00000406256 UBTFL1P0CB47 393 aaPredicted RBP19.97■□□□□ 0.79
GDPD3-202ENST00000406256 IARSP41252 1262 aaKnown RBP19.97■□□□□ 0.79
GDPD3-202ENST00000406256 RFX5P48382 616 aaPredicted RBP19.97■□□□□ 0.79
GDPD3-202ENST00000406256 MPNDQ8N594 471 aa19.97■□□□□ 0.79
GDPD3-202ENST00000406256 POLLQ9UGP5 575 aa19.97■□□□□ 0.79
GDPD3-202ENST00000406256 MINPP1Q9UNW1 487 aa19.97■□□□□ 0.79
GDPD3-202ENST00000406256 LRRFIP2Q9Y608 721 aaKnown RBP19.97■□□□□ 0.79
GDPD3-202ENST00000406256 ZNF646O15015 1829 aaPredicted RBP19.97■□□□□ 0.79
GDPD3-202ENST00000406256 ANKRD18BA2A2Z9 1011 aa19.96■□□□□ 0.79
GDPD3-202ENST00000406256 WTIPA6NIX2 430 aaPredicted RBP19.96■□□□□ 0.79
GDPD3-202ENST00000406256 IFIT5Q13325 482 aaKnown RBP19.96■□□□□ 0.79
GDPD3-202ENST00000406256 DPP8Q6V1X1 898 aaPredicted RBP19.96■□□□□ 0.79
GDPD3-202ENST00000406256 ZC3H4Q9UPT8 1303 aaKnown RBP19.96■□□□□ 0.79
GDPD3-202ENST00000406256 PSME4Q14997 1843 aa19.96■□□□□ 0.79
GDPD3-202ENST00000406256 ZNF784Q8NCA9 323 aaPredicted RBP19.95■□□□□ 0.79
GDPD3-202ENST00000406256 CHMP3Q9Y3E7 222 aa19.95■□□□□ 0.79
GDPD3-202ENST00000406256 ZBTB7BO15156 539 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms