RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 ARAP1Q96P48 1450 aa6.79□□□□□ -1.32
CNGA1-202ENST00000402813 XPO4Q9C0E2 1151 aaKnown RBP6.79□□□□□ -1.32
CNGA1-202ENST00000402813 STK26Q9P289 416 aa6.79□□□□□ -1.32
CNGA1-202ENST00000402813 TRIM6-TRIM34B2RNG4 842 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 H3BRB1 525 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 HTATSF1O43719 755 aaKnown RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 ALDH1L1O75891 902 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 TPPPO94811 219 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 BAIAP3O94812 1187 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 U2AF1L5P0DN76 240 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 RASA1P20936 1047 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 NAP1L1P55209 391 aaKnown RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 U2AF1Q01081 240 aaKnown RBP eCLIP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 NFX1Q12986 1120 aaKnown RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 PDE3BQ13370 1112 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 SPECC1Q5M775 1068 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 CCDC158Q5M9N0 1113 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 UTP14CQ5TAP6 766 aaKnown RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 C16orf87Q6PH81 154 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 IQCF2Q8IXL9 164 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 SELENOOQ9BVL4 669 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 RNF39Q9H2S5 420 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 TUT1Q9H6E5 874 aaKnown RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 EMILIN3Q9NT22 766 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 DDX41Q9UJV9 622 aaKnown RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 C19orf81C9J6K1 198 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 KIF5CO60282 957 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 PRMT3O60678 531 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 OSBPP22059 807 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 DNAJC21Q5F1R6 531 aaKnown RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 KIAA1614Q5VZ46 1190 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 C14orf80Q86SX3 495 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 NELL1Q92832 810 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 CCDC34Q96HJ3 373 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 PHOX2BQ99453 314 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 FAM167BQ9BTA0 163 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 CCDC94Q9BW85 323 aaPredicted RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 FANCLQ9NW38 375 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 DCAF16Q9NXF7 216 aa6.78□□□□□ -1.32
CNGA1-202ENST00000402813 XPO7Q9UIA9 1087 aaKnown RBP6.78□□□□□ -1.32
CNGA1-202ENST00000402813 FYCO1Q9BQS8 1478 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 SOGA1O94964 1423 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 GOLGA6L22H0YM25 854 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 USP17L8P0C7I0 530 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 HCLS1P14317 486 aaPredicted RBP6.77□□□□□ -1.33
CNGA1-202ENST00000402813 TTF1Q15361 905 aaPredicted RBP6.77□□□□□ -1.33
CNGA1-202ENST00000402813 SLC4A8Q2Y0W8 1093 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 SLFNL1Q499Z3 407 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 ANKRD45Q5TZF3 282 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 TMC4Q7Z404 712 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 METTL3Q86U44 580 aaKnown RBP6.77□□□□□ -1.33
CNGA1-202ENST00000402813 CKAP2LQ8IYA6 745 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 AGAP3Q96P47 875 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 GPR101Q96P66 508 aaPredicted RBP6.77□□□□□ -1.33
CNGA1-202ENST00000402813 CUX1P39880 1505 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 TMEM110-MUSTN1A8MSY1 372 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 NCAM1P13591 858 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 PAX7P23759 505 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 CFAP161Q6P656 301 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 IFNL2Q8IZJ0 200 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 CPXCR1Q8N123 301 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 GIMAP1Q8WWP7 306 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 TRMT2BQ96GJ1 504 aaKnown RBP6.77□□□□□ -1.33
CNGA1-202ENST00000402813 FAM161BQ96MY7 647 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 SLX1AQ9BQ83 275 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 HOXC10Q9NYD6 342 aa6.77□□□□□ -1.33
CNGA1-202ENST00000402813 DDB1Q16531 1140 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 ZNF394Q53GI3 561 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 PPP4R3AQ6IN85 833 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 KRT26Q7Z3Y9 468 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 RASSF3Q86WH2 238 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 MPP4Q96JB8 637 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 COMMD8Q9NX08 183 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 VGLL3A8MV65 326 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 SCGB1D2O95969 90 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 ATF3P18847 181 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 SARSP49591 514 aaKnown RBP6.76□□□□□ -1.33
CNGA1-202ENST00000402813 PTGDRQ13258 359 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 TMED1Q13445 227 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 ALKBH2Q6NS38 261 aa6.76□□□□□ -1.33
CNGA1-202ENST00000402813 DHX36Q9H2U1 1008 aaKnown RBP6.76□□□□□ -1.33
CNGA1-202ENST00000402813 UTP6Q9NYH9 597 aaKnown RBP6.76□□□□□ -1.33
CNGA1-202ENST00000402813 RBM19Q9Y4C8 960 aaKnown RBP6.76□□□□□ -1.33
CNGA1-202ENST00000402813 DHX57Q6P158 1386 aaKnown RBP6.76□□□□□ -1.33
CNGA1-202ENST00000402813 POLR1AO95602 1720 aaPredicted RBP6.76□□□□□ -1.33
CNGA1-202ENST00000402813 FAM196BA6NMK8 535 aa6.75□□□□□ -1.33
CNGA1-202ENST00000402813 OAS2P29728 719 aaKnown RBP6.75□□□□□ -1.33
CNGA1-202ENST00000402813 PTK7Q13308 1070 aa6.75□□□□□ -1.33
CNGA1-202ENST00000402813 VPS37DQ86XT2 251 aa6.75□□□□□ -1.33
CNGA1-202ENST00000402813 JAMLQ86YT9 394 aa6.75□□□□□ -1.33
CNGA1-202ENST00000402813 SAMD14Q8IZD0 417 aaPredicted RBP6.75□□□□□ -1.33
CNGA1-202ENST00000402813 TTC8Q8TAM2 541 aa6.75□□□□□ -1.33
CNGA1-202ENST00000402813 ZFPM2Q8WW38 1151 aa6.75□□□□□ -1.33
CNGA1-202ENST00000402813 ATXN2LQ8WWM7 1075 aaKnown RBP6.75□□□□□ -1.33
CNGA1-202ENST00000402813 RPGRQ92834 1020 aaKnown RBP6.75□□□□□ -1.33
CNGA1-202ENST00000402813 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.75□□□□□ -1.33
CNGA1-202ENST00000402813 IKBKGQ9Y6K9 419 aa6.75□□□□□ -1.33
CNGA1-202ENST00000402813 TRIM37O94972 964 aa6.75□□□□□ -1.33
CNGA1-202ENST00000402813 POU3F3P20264 500 aaPredicted RBP6.75□□□□□ -1.33
CNGA1-202ENST00000402813 ITGAEP38570 1179 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms