RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 BRF1Q92994 677 aa12.54□□□□□ -0.4
PPP4R1-203ENST00000400556 CBX8Q9HC52 389 aa12.54□□□□□ -0.4
PPP4R1-203ENST00000400556 CACNA1FO60840 1977 aa12.54□□□□□ -0.4
PPP4R1-203ENST00000400556 RIOK3O14730 519 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-203ENST00000400556 CCT2P78371 535 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-203ENST00000400556 TFCP2Q12800 502 aa12.54□□□□□ -0.4
PPP4R1-203ENST00000400556 MTX1Q13505 466 aa12.54□□□□□ -0.4
PPP4R1-203ENST00000400556 USP42Q9H9J4 1324 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 KIAA1524Q8TCG1 905 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 DBNLQ9UJU6 430 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 H3BQV1 296 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 IGSF3O75054 1194 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 ALDH1L1O75891 902 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 IFFO2Q5TF58 517 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 Q6ZUG5 572 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 LEO1Q8WVC0 666 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 DDX17Q92841 729 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 PGBD1Q96JS3 809 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 DBNDD2Q9BQY9 259 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 TM6SF1Q9BZW5 370 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 BCL2L12Q9HB09 334 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 ZHX1Q9UKY1 873 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 PSMA5P28066 241 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 NAA30Q147X3 362 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 FAM200AQ8TCP9 573 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 NLRP2Q9NX02 1062 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 KIF3AQ9Y496 699 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
PPP4R1-203ENST00000400556 ARID5BQ14865 1188 aa12.52□□□□□ -0.4
PPP4R1-203ENST00000400556 RNF20Q5VTR2 975 aa12.52□□□□□ -0.4
PPP4R1-203ENST00000400556 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.4
PPP4R1-203ENST00000400556 COL15A1P39059 1388 aa12.52□□□□□ -0.4
PPP4R1-203ENST00000400556 PPP4R3BQ5MIZ7 849 aa12.52□□□□□ -0.41
PPP4R1-203ENST00000400556 RAB11FIP4Q86YS3 637 aa12.52□□□□□ -0.41
PPP4R1-203ENST00000400556 ZNF592Q92610 1267 aa12.52□□□□□ -0.41
PPP4R1-203ENST00000400556 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-203ENST00000400556 TAF5LO75529 589 aa12.52□□□□□ -0.41
PPP4R1-203ENST00000400556 HOXB7P09629 217 aa12.52□□□□□ -0.41
PPP4R1-203ENST00000400556 PDIA6Q15084 440 aa12.52□□□□□ -0.41
PPP4R1-203ENST00000400556 DDX58O95786 925 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-203ENST00000400556 NEXNQ0ZGT2 675 aa12.51□□□□□ -0.41
PPP4R1-203ENST00000400556 MAP7D2Q96T17 732 aa12.51□□□□□ -0.41
PPP4R1-203ENST00000400556 NEURL1BA8MQ27 555 aa12.51□□□□□ -0.41
PPP4R1-203ENST00000400556 ZNF165P49910 485 aa12.51□□□□□ -0.41
PPP4R1-203ENST00000400556 ZNF496Q96IT1 587 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-203ENST00000400556 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
PPP4R1-203ENST00000400556 NPHP4O75161 1426 aaPredicted RBP12.5□□□□□ -0.41
PPP4R1-203ENST00000400556 CYP21A2P08686 494 aa12.5□□□□□ -0.41
PPP4R1-203ENST00000400556 ATP2B3Q16720 1220 aa12.5□□□□□ -0.41
PPP4R1-203ENST00000400556 GCKRQ14397 625 aa12.5□□□□□ -0.41
PPP4R1-203ENST00000400556 NEK1Q96PY6 1258 aa12.5□□□□□ -0.41
PPP4R1-203ENST00000400556 LTN1O94822 1766 aa12.5□□□□□ -0.41
PPP4R1-203ENST00000400556 APOBRQ0VD83 1088 aa12.5□□□□□ -0.41
PPP4R1-203ENST00000400556 CABLES1Q8TDN4 633 aa12.5□□□□□ -0.41
PPP4R1-203ENST00000400556 TIMM10P62072 90 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 ZNF790Q6PG37 636 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 CCDC85AQ96PX6 553 aaPredicted RBP12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 PDCP20941 246 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 U2AF2P26368 475 aaKnown RBP eCLIP12.49□□□□□ -0.413e-8■■■■■ 27.3
PPP4R1-203ENST00000400556 HSP90AB3PQ58FF7 597 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 OTUD7BQ6GQQ9 843 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 KCNB2Q92953 911 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 PRIMPOLQ96LW4 560 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 SPTLC3Q9NUV7 552 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 GOLIM4O00461 696 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 SCRN1Q12765 414 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 STOX1Q6ZVD7 989 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 CCDC144CPQ8IYA2 1237 aa12.49□□□□□ -0.41
PPP4R1-203ENST00000400556 HMGN5P82970 282 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 CHAF1AQ13111 956 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 AMOTQ4VCS5 1084 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 KCNH5Q8NCM2 988 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 SCAND2PQ9GZW5 306 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 A0A087WZG4 1122 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 GOLGA6L6A8MZA4 724 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 CHRNA2Q15822 529 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 C11orf57Q6ZUT1 292 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 SYTL4Q96C24 671 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 MARF1Q9Y4F3 1742 aaKnown RBP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 V9GYY5 206 aaPredicted RBP12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 HIP1O00291 1037 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 CSB-PGBD3P0DP91 1061 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 ANKRD13DQ6ZTN6 518 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 NPHP3Q7Z494 1330 aa12.48□□□□□ -0.41
PPP4R1-203ENST00000400556 PTPN12Q05209 780 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 GTF3C6Q969F1 213 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 CCDC94Q9BW85 323 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 LMBR1LQ6UX01 489 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 RAPGEF4Q8WZA2 1011 aa12.47□□□□□ -0.41
PPP4R1-203ENST00000400556 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms