RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 CNTNAP3BQ96NU0 1288 aa9.49□□□□□ -0.89
CSNK2A1-204ENST00000400227 CNTNAP3Q9BZ76 1288 aa9.49□□□□□ -0.89
CSNK2A1-204ENST00000400227 MBIPQ9NS73 344 aa9.49□□□□□ -0.89
CSNK2A1-204ENST00000400227 DENND4BO75064 1496 aaPredicted RBP9.49□□□□□ -0.89
CSNK2A1-204ENST00000400227 RAPGEF6Q8TEU7 1601 aa9.49□□□□□ -0.89
CSNK2A1-204ENST00000400227 FGFR3P22607 806 aa9.48□□□□□ -0.89
CSNK2A1-204ENST00000400227 LAMC2Q13753 1193 aa9.48□□□□□ -0.89
CSNK2A1-204ENST00000400227 BTLAQ7Z6A9 289 aa9.48□□□□□ -0.89
CSNK2A1-204ENST00000400227 DMGDHQ9UI17 866 aaKnown RBP9.48□□□□□ -0.89
CSNK2A1-204ENST00000400227 HCN2Q9UL51 889 aa9.48□□□□□ -0.89
CSNK2A1-204ENST00000400227 TONSLQ96HA7 1378 aa9.48□□□□□ -0.89
CSNK2A1-204ENST00000400227 GRIN2AQ12879 1464 aa9.47□□□□□ -0.89
CSNK2A1-204ENST00000400227 MX2P20592 715 aa9.47□□□□□ -0.89
CSNK2A1-204ENST00000400227 TYRO3Q06418 890 aa9.47□□□□□ -0.89
CSNK2A1-204ENST00000400227 DDX10Q13206 875 aaKnown RBP9.47□□□□□ -0.89
CSNK2A1-204ENST00000400227 IFT43Q96FT9 208 aa9.47□□□□□ -0.89
CSNK2A1-204ENST00000400227 CEP63Q96MT8 703 aa9.47□□□□□ -0.89
CSNK2A1-204ENST00000400227 MTMR7Q9Y216 660 aa9.47□□□□□ -0.89
CSNK2A1-204ENST00000400227 DNMT1P26358 1616 aaKnown RBP9.47□□□□□ -0.89
CSNK2A1-204ENST00000400227 TNFRSF10BO14763 440 aa9.47□□□□□ -0.89
CSNK2A1-204ENST00000400227 NUP153P49790 1475 aaKnown RBP9.46□□□□□ -0.9
CSNK2A1-204ENST00000400227 BRD2P25440 801 aaKnown RBP9.46□□□□□ -0.9
CSNK2A1-204ENST00000400227 SRSF11Q05519 484 aaKnown RBP9.46□□□□□ -0.9
CSNK2A1-204ENST00000400227 BRD7Q9NPI1 651 aa9.46□□□□□ -0.9
CSNK2A1-204ENST00000400227 MICAL2O94851 1124 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 BRD1O95696 1058 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 CD33P20138 364 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 CTBSQ01459 385 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 FAM182BQ5T319 152 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 HELQQ8TDG4 1101 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 GTF3C2Q8WUA4 911 aaPredicted RBP9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 TRAIPQ9BWF2 469 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 STRN4Q9NRL3 753 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 RRP7BPQ9NSQ0 103 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 MARK1Q9P0L2 795 aa9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 NSFL1CQ9UNZ2 370 aaKnown RBP9.45□□□□□ -0.9
CSNK2A1-204ENST00000400227 MAGI1Q96QZ7 1491 aaPredicted RBP9.44□□□□□ -0.9
CSNK2A1-204ENST00000400227 ROCK1Q13464 1354 aa9.44□□□□□ -0.9
CSNK2A1-204ENST00000400227 KCNQ4P56696 695 aa9.44□□□□□ -0.9
CSNK2A1-204ENST00000400227 ETFBKMTQ8IXQ9 262 aa9.44□□□□□ -0.9
CSNK2A1-204ENST00000400227 STIM2Q9P246 746 aa9.44□□□□□ -0.9
CSNK2A1-204ENST00000400227 ADCY10Q96PN6 1610 aa9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 CEP170Q5SW79 1584 aa9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 CCER2I3L3R5 266 aa9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 C2CD2LO14523 706 aa9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 INPP5BP32019 993 aa9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 IDH3AP50213 366 aa9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 SFSWAPQ12872 951 aaKnown RBP9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 FAM26DQ5JW98 314 aa9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 TREML1Q86YW5 311 aa9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 DNMT3AQ9Y6K1 912 aaPredicted RBP9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 DAPK1P53355 1430 aa9.43□□□□□ -0.9
CSNK2A1-204ENST00000400227 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 SLURP2P0DP57 97 aa9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 BMP4P12644 408 aa9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 MAP2K3P46734 347 aa9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 TXNDC2Q86VQ3 553 aa9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 HIRIP3Q9BW71 556 aaPredicted RBP9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 KCNH4Q9UQ05 1017 aa9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 SUPT16HQ9Y5B9 1047 aaKnown RBP9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 ABCC5O15440 1437 aa9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 ADGBQ8N7X0 1667 aa9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 ITSN2Q9NZM3 1697 aa9.42□□□□□ -0.9
CSNK2A1-204ENST00000400227 ARSDP51689 593 aa9.41□□□□□ -0.9
CSNK2A1-204ENST00000400227 ABTB2Q8N961 1025 aa9.41□□□□□ -0.9
CSNK2A1-204ENST00000400227 SYNJ2O15056 1496 aa9.41□□□□□ -0.9
CSNK2A1-204ENST00000400227 OPLAHO14841 1288 aa9.4□□□□□ -0.9
CSNK2A1-204ENST00000400227 CROCC2H7BZ55 1655 aa9.4□□□□□ -0.9
CSNK2A1-204ENST00000400227 TROQ12816 1431 aaPredicted RBP9.4□□□□□ -0.91
CSNK2A1-204ENST00000400227 ABL1P00519 1130 aa9.4□□□□□ -0.91
CSNK2A1-204ENST00000400227 EPB42P16452 691 aa9.4□□□□□ -0.91
CSNK2A1-204ENST00000400227 GRIN2CQ14957 1233 aa9.4□□□□□ -0.91
CSNK2A1-204ENST00000400227 MPHOSPH9Q99550 1183 aa9.4□□□□□ -0.91
CSNK2A1-204ENST00000400227 EGFL7Q9UHF1 273 aa9.4□□□□□ -0.91
CSNK2A1-204ENST00000400227 NUP160Q12769 1436 aa9.39□□□□□ -0.91
CSNK2A1-204ENST00000400227 ZBTB39O15060 712 aa9.39□□□□□ -0.91
CSNK2A1-204ENST00000400227 GRNP28799 593 aaKnown RBP9.39□□□□□ -0.91
CSNK2A1-204ENST00000400227 SERPINB4P48594 390 aa9.39□□□□□ -0.91
CSNK2A1-204ENST00000400227 SF3B2Q13435 895 aaKnown RBP9.39□□□□□ -0.91
CSNK2A1-204ENST00000400227 MTMR3Q13615 1198 aa9.39□□□□□ -0.91
CSNK2A1-204ENST00000400227 KIF14Q15058 1648 aa9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 ANP32CO43423 234 aa9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 PDIA4P13667 645 aaKnown RBP9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 NPR3P17342 541 aa9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 INSM1Q01101 510 aaPredicted RBP9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 FKBP4Q02790 459 aaKnown RBP eCLIP9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 ZNF211Q13398 564 aaPredicted RBP9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 SLC30A3Q99726 388 aa9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 ANKRD30BQ9BXX2 1392 aa9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 ERCC6Q03468 1493 aa9.38□□□□□ -0.91
CSNK2A1-204ENST00000400227 PRG4Q92954 1404 aaPredicted RBP9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 ARAFP10398 606 aa9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 MPSTP25325 297 aa9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 ZAP70P43403 619 aa9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 SPEM2Q0P670 501 aa9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 ACDQ96AP0 544 aa9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 OXCT2Q9BYC2 517 aaPredicted RBP9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 C11orf16Q9NQ32 467 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms