RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 UQCRHP07919 91 aa30.46■■■□□ 2.47
COL13A1-203ENST00000398969 PDIA4P13667 645 aaKnown RBP30.46■■■□□ 2.47
COL13A1-203ENST00000398969 WDR17Q8IZU2 1322 aa30.46■■■□□ 2.47
COL13A1-203ENST00000398969 MYL6BP14649 208 aa30.45■■■□□ 2.47
COL13A1-203ENST00000398969 ANKRD1Q15327 319 aa30.45■■■□□ 2.47
COL13A1-203ENST00000398969 EPHA10Q5JZY3 1008 aa30.45■■■□□ 2.47
COL13A1-203ENST00000398969 ALDH8A1Q9H2A2 487 aaPredicted RBP30.45■■■□□ 2.47
COL13A1-203ENST00000398969 PDCL3Q9H2J4 239 aa30.45■■■□□ 2.47
COL13A1-203ENST00000398969 KDM4AO75164 1064 aa30.45■■■□□ 2.46
COL13A1-203ENST00000398969 RPS6KB1P23443 525 aa30.45■■■□□ 2.46
COL13A1-203ENST00000398969 XAGE3Q8WTP9 111 aa30.45■■■□□ 2.46
COL13A1-203ENST00000398969 SLC52A2Q9HAB3 445 aa30.45■■■□□ 2.46
COL13A1-203ENST00000398969 TAF6LQ9Y6J9 622 aa30.45■■■□□ 2.46
COL13A1-203ENST00000398969 ABCA3Q99758 1704 aa30.45■■■□□ 2.46
COL13A1-203ENST00000398969 CYP27B1O15528 508 aa30.44■■■□□ 2.46
COL13A1-203ENST00000398969 CDC37L1Q7L3B6 337 aa30.44■■■□□ 2.46
COL13A1-203ENST00000398969 ZNF589Q86UQ0 364 aaPredicted RBP30.44■■■□□ 2.46
COL13A1-203ENST00000398969 MPNDQ8N594 471 aa30.44■■■□□ 2.46
COL13A1-203ENST00000398969 METTL22Q9BUU2 404 aaPredicted RBP30.44■■■□□ 2.46
COL13A1-203ENST00000398969 SASS6Q6UVJ0 657 aa30.43■■■□□ 2.46
COL13A1-203ENST00000398969 TCEANC2Q96MN5 208 aa30.43■■■□□ 2.46
COL13A1-203ENST00000398969 MYD88Q99836 296 aa30.43■■■□□ 2.46
COL13A1-203ENST00000398969 PKD1L3Q7Z443 1732 aa30.43■■■□□ 2.46
COL13A1-203ENST00000398969 PDCP20941 246 aa30.43■■■□□ 2.46
COL13A1-203ENST00000398969 COPS6Q7L5N1 327 aa30.43■■■□□ 2.46
COL13A1-203ENST00000398969 KRT85P78386 507 aa30.42■■■□□ 2.46
COL13A1-203ENST00000398969 TOB2Q14106 344 aaPredicted RBP30.42■■■□□ 2.46
COL13A1-203ENST00000398969 TTC6Q86TZ1 520 aa30.42■■■□□ 2.46
COL13A1-203ENST00000398969 ZNF830Q96NB3 372 aaPredicted RBP30.42■■■□□ 2.46
COL13A1-203ENST00000398969 HMG20BQ9P0W2 317 aa30.42■■■□□ 2.46
COL13A1-203ENST00000398969 COL5A2P05997 1499 aaPredicted RBP30.42■■■□□ 2.46
COL13A1-203ENST00000398969 TSGA10IPQ3SY00 556 aa30.42■■■□□ 2.46
COL13A1-203ENST00000398969 TOM1L2Q6ZVM7 507 aa30.42■■■□□ 2.46
COL13A1-203ENST00000398969 DCAF5Q96JK2 942 aa30.41■■■□□ 2.46
COL13A1-203ENST00000398969 FERMT3Q86UX7 667 aa30.4■■■□□ 2.46
COL13A1-203ENST00000398969 NFATC2IPQ8NCF5 419 aa30.4■■■□□ 2.46
COL13A1-203ENST00000398969 COPRSQ9NQ92 184 aa30.4■■■□□ 2.46
COL13A1-203ENST00000398969 ELP1O95163 1332 aa30.4■■■□□ 2.46
COL13A1-203ENST00000398969 TAF5LO75529 589 aa30.4■■■□□ 2.46
COL13A1-203ENST00000398969 PIBF1Q8WXW3 757 aa30.4■■■□□ 2.46
COL13A1-203ENST00000398969 RBM10P98175 930 aaKnown RBP30.39■■■□□ 2.46
COL13A1-203ENST00000398969 EDC3Q96F86 508 aaKnown RBP30.39■■■□□ 2.46
COL13A1-203ENST00000398969 ATP5JP18859 108 aa30.38■■■□□ 2.45
COL13A1-203ENST00000398969 RFX5P48382 616 aaPredicted RBP30.38■■■□□ 2.45
COL13A1-203ENST00000398969 USPL1Q5W0Q7 1092 aa30.38■■■□□ 2.45
COL13A1-203ENST00000398969 FAM173BQ6P4H8 233 aa30.38■■■□□ 2.45
COL13A1-203ENST00000398969 TTC12Q9H892 705 aaPredicted RBP30.38■■■□□ 2.45
COL13A1-203ENST00000398969 DBNLQ9UJU6 430 aaKnown RBP30.38■■■□□ 2.45
COL13A1-203ENST00000398969 LRP10Q7Z4F1 713 aa30.37■■■□□ 2.45
COL13A1-203ENST00000398969 ZNF496Q96IT1 587 aaPredicted RBP30.37■■■□□ 2.45
COL13A1-203ENST00000398969 CCDC192P0DO97 292 aa30.36■■■□□ 2.45
COL13A1-203ENST00000398969 ANKRD13DQ6ZTN6 518 aa30.36■■■□□ 2.45
COL13A1-203ENST00000398969 COL15A1P39059 1388 aa30.36■■■□□ 2.45
COL13A1-203ENST00000398969 DYNC1I1O14576 645 aa30.36■■■□□ 2.45
COL13A1-203ENST00000398969 AP5Z1O43299 807 aa30.36■■■□□ 2.45
COL13A1-203ENST00000398969 TNNI3KQ59H18 835 aa30.36■■■□□ 2.45
COL13A1-203ENST00000398969 FPGT-TNNI3KV9GXZ4 949 aa30.36■■■□□ 2.45
COL13A1-203ENST00000398969 PTPN12Q05209 780 aaKnown RBP30.35■■■□□ 2.45
COL13A1-203ENST00000398969 TFCP2Q12800 502 aa30.34■■■□□ 2.45
COL13A1-203ENST00000398969 NOLC1Q14978 699 aaKnown RBP eCLIP30.34■■■□□ 2.45
COL13A1-203ENST00000398969 JARID2Q92833 1246 aaPredicted RBP30.34■■■□□ 2.45
COL13A1-203ENST00000398969 CARD10Q9BWT7 1032 aa30.34■■■□□ 2.45
COL13A1-203ENST00000398969 FAM13BQ9NYF5 915 aa30.34■■■□□ 2.45
COL13A1-203ENST00000398969 LIG1P18858 919 aa30.33■■■□□ 2.45
COL13A1-203ENST00000398969 PLCB2Q00722 1185 aa30.33■■■□□ 2.45
COL13A1-203ENST00000398969 STK3Q13188 491 aa30.33■■■□□ 2.45
COL13A1-203ENST00000398969 KRT32Q14532 448 aa30.33■■■□□ 2.45
COL13A1-203ENST00000398969 PARP4Q9UKK3 1724 aaKnown RBP30.33■■■□□ 2.45
COL13A1-203ENST00000398969 RABL6Q3YEC7 729 aaPredicted RBP30.33■■■□□ 2.45
COL13A1-203ENST00000398969 NUP62CLQ9H1M0 184 aa30.33■■■□□ 2.45
COL13A1-203ENST00000398969 USP16Q9Y5T5 823 aa30.33■■■□□ 2.45
COL13A1-203ENST00000398969 RFX7Q2KHR2 1363 aa30.32■■■□□ 2.44
COL13A1-203ENST00000398969 SCAND2PQ9GZW5 306 aaPredicted RBP30.32■■■□□ 2.44
COL13A1-203ENST00000398969 SNRPA1P09661 255 aaKnown RBP30.31■■■□□ 2.44
COL13A1-203ENST00000398969 MAP3K11Q16584 847 aa30.31■■■□□ 2.44
COL13A1-203ENST00000398969 ZCRB1Q8TBF4 217 aaKnown RBP30.31■■■□□ 2.44
COL13A1-203ENST00000398969 STRN4Q9NRL3 753 aa30.31■■■□□ 2.44
COL13A1-203ENST00000398969 CHMP3Q9Y3E7 222 aa30.31■■■□□ 2.44
COL13A1-203ENST00000398969 PIP4K2AP48426 406 aaPredicted RBP30.31■■■□□ 2.44
COL13A1-203ENST00000398969 DNTTIP2Q5QJE6 756 aaKnown RBP30.3■■■□□ 2.44
COL13A1-203ENST00000398969 UBE3BQ7Z3V4 1068 aa30.3■■■□□ 2.44
COL13A1-203ENST00000398969 NDUFB9Q9Y6M9 179 aa30.3■■■□□ 2.44
COL13A1-203ENST00000398969 ZNF609O15014 1411 aa30.3■■■□□ 2.44
COL13A1-203ENST00000398969 AFDNP55196 1824 aaKnown RBP30.3■■■□□ 2.44
COL13A1-203ENST00000398969 EVA1CP58658 441 aa30.3■■■□□ 2.44
COL13A1-203ENST00000398969 NEK1Q96PY6 1258 aa30.3■■■□□ 2.44
COL13A1-203ENST00000398969 PCDH11XQ9BZA7 1347 aa30.29■■■□□ 2.44
COL13A1-203ENST00000398969 PCDH11YQ9BZA8 1340 aa30.29■■■□□ 2.44
COL13A1-203ENST00000398969 GTF3C6Q969F1 213 aa30.29■■■□□ 2.44
COL13A1-203ENST00000398969 SPATA32Q96LK8 384 aa30.29■■■□□ 2.44
COL13A1-203ENST00000398969 CAMK4Q16566 473 aa30.29■■■□□ 2.44
COL13A1-203ENST00000398969 FAM200AQ8TCP9 573 aa30.29■■■□□ 2.44
COL13A1-203ENST00000398969 MAP7D2Q96T17 732 aa30.29■■■□□ 2.44
COL13A1-203ENST00000398969 SPTLC3Q9NUV7 552 aa30.29■■■□□ 2.44
COL13A1-203ENST00000398969 IL2RBP14784 551 aa30.28■■■□□ 2.44
COL13A1-203ENST00000398969 CABP4P57796 275 aa30.28■■■□□ 2.44
COL13A1-203ENST00000398969 TTC5Q8N0Z6 440 aa30.28■■■□□ 2.44
COL13A1-203ENST00000398969 C17orf53Q8N3J3 647 aaPredicted RBP30.28■■■□□ 2.44
COL13A1-203ENST00000398969 TFIP11Q9UBB9 837 aaKnown RBP30.28■■■□□ 2.44
COL13A1-203ENST00000398969 MRVI1Q9Y6F6 885 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms