RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 DZIP3Q86Y13 1208 aaKnown RBP31.05■■■□□ 2.56
SHARPIN-202ENST00000398712 ZNF594Q96JF6 807 aaPredicted RBP31.05■■■□□ 2.56
SHARPIN-202ENST00000398712 JCADQ9P266 1359 aa31.04■■■□□ 2.56
SHARPIN-202ENST00000398712 A0A0G2JS52 829 aa31.04■■■□□ 2.56
SHARPIN-202ENST00000398712 CUL4AQ13619 759 aa31.04■■■□□ 2.56
SHARPIN-202ENST00000398712 LRRC24Q50LG9 513 aa31.04■■■□□ 2.56
SHARPIN-202ENST00000398712 KCNB2Q92953 911 aa31.04■■■□□ 2.56
SHARPIN-202ENST00000398712 ACSBG1Q96GR2 724 aa31.04■■■□□ 2.56
SHARPIN-202ENST00000398712 CLEC17AQ6ZS10 378 aa31.03■■■□□ 2.56
SHARPIN-202ENST00000398712 NEUROD6Q96NK8 337 aa31.03■■■□□ 2.56
SHARPIN-202ENST00000398712 GPTP24298 496 aa31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 SSFA2P28290 1259 aa31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 MED23Q9ULK4 1368 aa31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 RREB1Q92766 1687 aa31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 A0A0D9SFI3 127 aa31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 RASEFQ8IZ41 740 aa31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 ZGPATQ8N5A5 531 aaKnown RBP31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 INTS4Q96HW7 963 aaKnown RBP31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 CCDC87Q9NVE4 849 aa31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 CEP126Q9P2H0 1117 aa31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 MYH3P11055 1940 aa31.02■■■□□ 2.56
SHARPIN-202ENST00000398712 IFIT5Q13325 482 aaKnown RBP31.01■■■□□ 2.55
SHARPIN-202ENST00000398712 TICAM2Q86XR7 235 aa31.01■■■□□ 2.55
SHARPIN-202ENST00000398712 MAP4K1Q92918 833 aa31.01■■■□□ 2.55
SHARPIN-202ENST00000398712 ATP6V1AP38606 617 aa31■■■□□ 2.55
SHARPIN-202ENST00000398712 TAF7LQ5H9L4 462 aa31■■■□□ 2.55
SHARPIN-202ENST00000398712 DNAJC2Q99543 621 aaKnown RBP31■■■□□ 2.55
SHARPIN-202ENST00000398712 ZKSCAN1P17029 563 aaPredicted RBP31■■■□□ 2.55
SHARPIN-202ENST00000398712 NECTIN1Q15223 517 aa31■■■□□ 2.55
SHARPIN-202ENST00000398712 PRPF40BQ6NWY9 871 aaKnown RBP31■■■□□ 2.55
SHARPIN-202ENST00000398712 TM6SF1Q9BZW5 370 aa31■■■□□ 2.55
SHARPIN-202ENST00000398712 AKAP2Q9Y2D5 859 aa31■■■□□ 2.55
SHARPIN-202ENST00000398712 LOC102724428A0A0B4J2F2 783 aa30.99■■■□□ 2.55
SHARPIN-202ENST00000398712 CYP2E1P05181 493 aaPredicted RBP30.99■■■□□ 2.55
SHARPIN-202ENST00000398712 KCNJ4P48050 445 aa30.99■■■□□ 2.55
SHARPIN-202ENST00000398712 EIF5P55010 431 aaKnown RBP30.99■■■□□ 2.55
SHARPIN-202ENST00000398712 SIK1P57059 783 aa30.99■■■□□ 2.55
SHARPIN-202ENST00000398712 SMARCC1Q92922 1105 aaPredicted RBP30.99■■■□□ 2.55
SHARPIN-202ENST00000398712 EDC3Q96F86 508 aaKnown RBP30.99■■■□□ 2.55
SHARPIN-202ENST00000398712 PUS3Q9BZE2 481 aaKnown RBP30.99■■■□□ 2.55
SHARPIN-202ENST00000398712 RBM8AQ9Y5S9 174 aaKnown RBP30.99■■■□□ 2.55
SHARPIN-202ENST00000398712 TTC14Q96N46 770 aa30.98■■■□□ 2.55
SHARPIN-202ENST00000398712 TBC1D2BQ9UPU7 963 aa30.98■■■□□ 2.55
SHARPIN-202ENST00000398712 TRAK2O60296 914 aa30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 TIMM10P62072 90 aa30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 INTS5Q6P9B9 1019 aaKnown RBP30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 TRMT112Q9UI30 125 aaKnown RBP30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 SPEF2Q9C093 1822 aa30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 A0A1B0GUL7 405 aa30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 GOLGA6L22H0YM25 854 aa30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 CRKLP46109 303 aaKnown RBP30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 VPS72Q15906 364 aa30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 PALLDQ8WX93 1383 aa30.97■■■□□ 2.55
SHARPIN-202ENST00000398712 CTSWP56202 376 aa30.96■■■□□ 2.55
SHARPIN-202ENST00000398712 RNF20Q5VTR2 975 aa30.96■■■□□ 2.55
SHARPIN-202ENST00000398712 NOL8Q76FK4 1167 aaKnown RBP30.96■■■□□ 2.55
SHARPIN-202ENST00000398712 ZNF34Q8IZ26 560 aa30.96■■■□□ 2.55
SHARPIN-202ENST00000398712 KBTBD3Q8NAB2 608 aa30.96■■■□□ 2.55
SHARPIN-202ENST00000398712 IRS4O14654 1257 aaPredicted RBP30.95■■■□□ 2.55
SHARPIN-202ENST00000398712 CASTP20810 708 aaKnown RBP30.95■■■□□ 2.55
SHARPIN-202ENST00000398712 CREB3L3Q68CJ9 461 aa30.95■■■□□ 2.55
SHARPIN-202ENST00000398712 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.95■■■□□ 2.55
SHARPIN-202ENST00000398712 NGLY1Q96IV0 654 aa30.95■■■□□ 2.55
SHARPIN-202ENST00000398712 TTLL11Q8NHH1 800 aa30.94■■■□□ 2.54
SHARPIN-202ENST00000398712 C8orf37Q96NL8 207 aa30.94■■■□□ 2.54
SHARPIN-202ENST00000398712 PAG1Q9NWQ8 432 aa30.94■■■□□ 2.54
SHARPIN-202ENST00000398712 ZNF831Q5JPB2 1677 aa30.93■■■□□ 2.54
SHARPIN-202ENST00000398712 PDE8AO60658 829 aa30.93■■■□□ 2.54
SHARPIN-202ENST00000398712 JAKMIP1Q96N16 626 aaKnown RBP30.93■■■□□ 2.54
SHARPIN-202ENST00000398712 BCL9LQ86UU0 1499 aa30.93■■■□□ 2.54
SHARPIN-202ENST00000398712 ANKRD18BA2A2Z9 1011 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 FAM98CQ17RN3 349 aaKnown RBP30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 DDX46Q7L014 1031 aaKnown RBP30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 SYNE4Q8N205 404 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 AK7Q96M32 723 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 CCDC85AQ96PX6 553 aaPredicted RBP30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 ZSWIM6Q9HCJ5 1215 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 CYP46A1Q9Y6A2 500 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 NDUFB9Q9Y6M9 179 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 BAG4O95429 457 aaKnown RBP30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 ITGA6P23229 1130 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 AK2P54819 239 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 SKOR2Q2VWA4 1001 aaPredicted RBP30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 VPS53Q5VIR6 699 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 HMG20BQ9P0W2 317 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 LIMCH1Q9UPQ0 1083 aa30.92■■■□□ 2.54
SHARPIN-202ENST00000398712 SPATA31A6Q5VVP1 1343 aa30.91■■■□□ 2.54
SHARPIN-202ENST00000398712 UBN2Q6ZU65 1347 aa30.91■■■□□ 2.54
SHARPIN-202ENST00000398712 SLC27A2O14975 620 aa30.91■■■□□ 2.54
SHARPIN-202ENST00000398712 IFIT1P09914 478 aaKnown RBP30.91■■■□□ 2.54
SHARPIN-202ENST00000398712 PSMA5P28066 241 aa30.91■■■□□ 2.54
SHARPIN-202ENST00000398712 ITPK1Q13572 414 aa30.91■■■□□ 2.54
SHARPIN-202ENST00000398712 ZNF589Q86UQ0 364 aaPredicted RBP30.91■■■□□ 2.54
SHARPIN-202ENST00000398712 TAF5LO75529 589 aa30.9■■■□□ 2.54
SHARPIN-202ENST00000398712 MCMDC2Q4G0Z9 681 aa30.9■■■□□ 2.54
SHARPIN-202ENST00000398712 CCDC158Q5M9N0 1113 aa30.9■■■□□ 2.54
SHARPIN-202ENST00000398712 GREM2Q9H772 168 aa30.9■■■□□ 2.54
SHARPIN-202ENST00000398712 SH3TC1Q8TE82 1336 aa30.9■■■□□ 2.54
SHARPIN-202ENST00000398712 GOLIM4O00461 696 aa30.89■■■□□ 2.54
SHARPIN-202ENST00000398712 COL5A3P25940 1745 aaPredicted RBP30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms