RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ME1P48163 572 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 SDF4Q9BRK5 362 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 METTL22Q9BUU2 404 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-202ENST00000398417 PUS3Q9BZE2 481 aaKnown RBP5.8□□□□□ -1.48
SMAD4-202ENST00000398417 KIF3AQ9Y496 699 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 E9PCH4 1651 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 SMC2O95347 1197 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 TPM4P67936 248 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 ZNF790Q6PG37 636 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 SLC52A2Q9HAB3 445 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 TET3O43151 1660 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 PPRC1Q5VV67 1664 aaKnown RBP5.8□□□□□ -1.48
SMAD4-202ENST00000398417 RGS12O14924 1447 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 PTPDC1A2A3K4 754 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 CBX1P83916 185 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 RRP12Q5JTH9 1297 aaKnown RBP5.8□□□□□ -1.48
SMAD4-202ENST00000398417 NCOA5Q9HCD5 579 aaKnown RBP5.8□□□□□ -1.48
SMAD4-202ENST00000398417 POLR3DP05423 398 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-202ENST00000398417 PHKG2P15735 406 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 SYNE3Q6ZMZ3 975 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 FSIP1Q8NA03 581 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 CHMP4CQ96CF2 233 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 DNAJC5Q9H3Z4 198 aa5.8□□□□□ -1.48
SMAD4-202ENST00000398417 RNF113AO15541 343 aaKnown RBP5.79□□□□□ -1.48
SMAD4-202ENST00000398417 MCMDC2Q4G0Z9 681 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 LRRC24Q50LG9 513 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 ISM2Q6H9L7 571 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 RALYLQ86SE5 291 aaKnown RBP5.79□□□□□ -1.48
SMAD4-202ENST00000398417 DDX19AQ9NUU7 478 aaKnown RBP5.79□□□□□ -1.48
SMAD4-202ENST00000398417 GLI2P10070 1586 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 MROH1Q8NDA8 1641 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 PDCP20941 246 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 CLEC17AQ6ZS10 378 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 MAP4K1Q92918 833 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 TTC14Q96N46 770 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 PRDM11Q9NQV5 511 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 BIN1O00499 593 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 TTLL7Q6ZT98 887 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 CREBRFQ8IUR6 639 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 ZMYND15Q9H091 742 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 NEURL1BA8MQ27 555 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 CBX8Q9HC52 389 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 CLIP2Q9UDT6 1046 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 UTRNP46939 3433 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 KDRP35968 1356 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 IDH1O75874 414 aaKnown RBP5.79□□□□□ -1.48
SMAD4-202ENST00000398417 IGKV5-2P06315 115 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 CCDC57Q2TAC2 916 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 SCAND2PQ9GZW5 306 aaPredicted RBP5.79□□□□□ -1.48
SMAD4-202ENST00000398417 TRMT1Q9NXH9 659 aaKnown RBP5.79□□□□□ -1.48
SMAD4-202ENST00000398417 KLF18A0A0U1RQI7 1052 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 MCM5P33992 734 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 CCDC144CPQ8IYA2 1237 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 CLSTN2Q9H4D0 955 aa5.79□□□□□ -1.48
SMAD4-202ENST00000398417 TYRO3Q06418 890 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 ERCC4Q92889 916 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 OVOS2A0A0J9YW53 1432 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 OVOS2Q6IE36 1432 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 SETBP1Q9Y6X0 1596 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 TAF5LO75529 589 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 TRDNQ13061 729 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 TRIM29Q14134 588 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 NECTIN1Q15223 517 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 METTL24Q5JXM2 366 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 CWC25Q9NXE8 425 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 ORC3Q9UBD5 711 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 TMX1Q9H3N1 280 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 PTPN12Q05209 780 aaKnown RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 HELBQ8NG08 1087 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 A0A087WWV3 80 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 IMMTQ16891 758 aaKnown RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 ZCRB1Q8TBF4 217 aaKnown RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 KDM5AP29375 1690 aaKnown RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 EPB41L2O43491 1005 aaKnown RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 PDIA4P13667 645 aaKnown RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 RXRAP19793 462 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 HSPA2P54652 639 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 KIF6Q6ZMV9 814 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 GPHNQ9NQX3 736 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 SHROOM2Q13796 1616 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 ABCA9Q8IUA7 1624 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 SPDYE4A6NLX3 237 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 ZNF500O60304 480 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 HS1BP3Q53T59 392 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 FAM200AQ8TCP9 573 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 FTOQ9C0B1 505 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMAD4-202ENST00000398417 PAG1Q9NWQ8 432 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 HMG20BQ9P0W2 317 aa5.78□□□□□ -1.48
SMAD4-202ENST00000398417 PLBD2Q8NHP8 589 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 LEO1Q8WVC0 666 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-202ENST00000398417 TM6SF1Q9BZW5 370 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 DBNLQ9UJU6 430 aaKnown RBP5.77□□□□□ -1.49
SMAD4-202ENST00000398417 RPAP1Q9BWH6 1393 aaPredicted RBP5.77□□□□□ -1.49
SMAD4-202ENST00000398417 ADCY9O60503 1353 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 KINO60870 393 aaKnown RBP5.77□□□□□ -1.49
SMAD4-202ENST00000398417 NUP133Q8WUM0 1156 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 MTMR7Q9Y216 660 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 SSH2Q76I76 1423 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 GOLGA8AA7E2F4 631 aa5.77□□□□□ -1.49
SMAD4-202ENST00000398417 GOLGA8BA8MQT2 603 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms