RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
CHMP1A-201ENST00000397901 ALS2Q96Q42 1657 aa18.9■□□□□ 0.62
CHMP1A-201ENST00000397901 SMTNL1A8MU46 457 aa18.9■□□□□ 0.62
CHMP1A-201ENST00000397901 FAM193AP78312 1265 aa18.9■□□□□ 0.62
CHMP1A-201ENST00000397901 KCNB2Q92953 911 aa18.9■□□□□ 0.62
CHMP1A-201ENST00000397901 CCDC8Q9H0W5 538 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-201ENST00000397901 CCDC192P0DO97 292 aa18.89■□□□□ 0.61
CHMP1A-201ENST00000397901 AKAP4Q5JQC9 854 aa18.89■□□□□ 0.61
CHMP1A-201ENST00000397901 KRT222Q8N1A0 295 aa18.89■□□□□ 0.61
CHMP1A-201ENST00000397901 KIF18AQ8NI77 898 aa18.89■□□□□ 0.61
CHMP1A-201ENST00000397901 DBF4Q9UBU7 674 aaPredicted RBP18.89■□□□□ 0.61
CHMP1A-201ENST00000397901 STRCP1A6NGW2 1772 aa18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 LIG1P18858 919 aa18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 LMOD2Q6P5Q4 547 aa18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 ERC1Q8IUD2 1116 aa18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 PRAMEF22A3QJZ6 481 aa18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 TULP2O00295 520 aa18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 SLC27A2O14975 620 aa18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 KRT85P78386 507 aa18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 PLEKHO1Q53GL0 409 aaPredicted RBP18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 ANKRD24Q8TF21 1146 aa18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 TLR7Q9NYK1 1049 aaKnown RBP18.88■□□□□ 0.61
CHMP1A-201ENST00000397901 EAF2Q96CJ1 260 aaPredicted RBP18.87■□□□□ 0.61
CHMP1A-201ENST00000397901 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
CHMP1A-201ENST00000397901 TAF6LQ9Y6J9 622 aa18.87■□□□□ 0.61
CHMP1A-201ENST00000397901 PXDNQ92626 1479 aa18.87■□□□□ 0.61
CHMP1A-201ENST00000397901 A0A0D9SFI3 127 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 AMOTQ4VCS5 1084 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 MAP4K1Q92918 833 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 CHMP4AQ9BY43 222 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 TSPYL1Q9H0U9 437 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 SIL1Q9H173 461 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 BOLA2Q9H3K6 86 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 RGPD5Q99666 1765 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 SASH1O94885 1247 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 CREBRFQ8IUR6 639 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 CKAP2LQ8IYA6 745 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 SUCLG2Q96I99 432 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 NUP62CLQ9H1M0 184 aa18.86■□□□□ 0.61
CHMP1A-201ENST00000397901 ALDH1L1O75891 902 aa18.85■□□□□ 0.61
CHMP1A-201ENST00000397901 STK3Q13188 491 aa18.85■□□□□ 0.61
CHMP1A-201ENST00000397901 MAP3K11Q16584 847 aa18.85■□□□□ 0.61
CHMP1A-201ENST00000397901 KSR2Q6VAB6 950 aa18.85■□□□□ 0.61
CHMP1A-201ENST00000397901 FSD1Q9BTV5 496 aa18.85■□□□□ 0.61
CHMP1A-201ENST00000397901 AIMP1Q12904 312 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-201ENST00000397901 G3BP1Q13283 466 aaKnown RBP eCLIP18.85■□□□□ 0.61
CHMP1A-201ENST00000397901 BICC1Q9H694 974 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-201ENST00000397901 TFIP11Q9UBB9 837 aaKnown RBP18.85■□□□□ 0.61
CHMP1A-201ENST00000397901 TMEM94Q12767 1356 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 PSMA5P28066 241 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 TYRO3Q06418 890 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 BLOC1S2Q6QNY1 142 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 LUZP1Q86V48 1076 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 FAM200AQ8TCP9 573 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 PAXBP1Q9Y5B6 917 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 OVOS2A0A0G2JMS6 1433 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 MRVI1Q9Y6F6 885 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 DCCP43146 1447 aa18.84■□□□□ 0.61
CHMP1A-201ENST00000397901 KLHDC4Q8TBB5 520 aa18.83■□□□□ 0.61
CHMP1A-201ENST00000397901 KAZALD1Q96I82 304 aa18.83■□□□□ 0.61
CHMP1A-201ENST00000397901 DACT1Q9NYF0 836 aa18.83■□□□□ 0.61
CHMP1A-201ENST00000397901 GRM8O00222 908 aa18.83■□□□□ 0.6
CHMP1A-201ENST00000397901 GIGYF1O75420 1035 aaPredicted RBP18.83■□□□□ 0.6
CHMP1A-201ENST00000397901 PTGS1P23219 599 aa18.83■□□□□ 0.6
CHMP1A-201ENST00000397901 LARP1Q6PKG0 1096 aaKnown RBP18.83■□□□□ 0.6
CHMP1A-201ENST00000397901 GOLGA6L4A6NEF3 574 aa18.82■□□□□ 0.6
CHMP1A-201ENST00000397901 HIP1O00291 1037 aa18.82■□□□□ 0.6
CHMP1A-201ENST00000397901 RNMTO43148 476 aaKnown RBP18.82■□□□□ 0.6
CHMP1A-201ENST00000397901 TNMDQ9H2S6 317 aa18.82■□□□□ 0.6
CHMP1A-201ENST00000397901 PDCP20941 246 aa18.82■□□□□ 0.6
CHMP1A-201ENST00000397901 ZNF589Q86UQ0 364 aaPredicted RBP18.82■□□□□ 0.6
CHMP1A-201ENST00000397901 CCDC112Q8NEF3 446 aa18.82■□□□□ 0.6
CHMP1A-201ENST00000397901 SPATA32Q96LK8 384 aa18.82■□□□□ 0.6
CHMP1A-201ENST00000397901 LMTK3Q96Q04 1460 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 CAPN2P17655 700 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 ATF3P18847 181 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 RPS6KB1P23443 525 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 C1orf141Q5JVX7 400 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 RNF20Q5VTR2 975 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 ZNF397Q8NF99 534 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 EDC3Q96F86 508 aaKnown RBP18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 FAM53CQ9NYF3 392 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 TOB2Q14106 344 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 ANO6Q4KMQ2 910 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 ERBB3P21860 1342 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 ADAMTS7Q9UKP4 1686 aa18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 SIPA1L3O60292 1781 aaPredicted RBP18.81■□□□□ 0.6
CHMP1A-201ENST00000397901 ELP1O95163 1332 aa18.8■□□□□ 0.6
CHMP1A-201ENST00000397901 LINS1Q8NG48 757 aa18.8■□□□□ 0.6
CHMP1A-201ENST00000397901 CBX8Q9HC52 389 aa18.8■□□□□ 0.6
CHMP1A-201ENST00000397901 HDAC5Q9UQL6 1122 aa18.8■□□□□ 0.6
CHMP1A-201ENST00000397901 TNNT1P13805 278 aa18.79■□□□□ 0.6
CHMP1A-201ENST00000397901 ANKRD1Q15327 319 aa18.79■□□□□ 0.6
CHMP1A-201ENST00000397901 DRC7Q8IY82 874 aa18.79■□□□□ 0.6
CHMP1A-201ENST00000397901 LEO1Q8WVC0 666 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-201ENST00000397901 SCAND2PQ9GZW5 306 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-201ENST00000397901 JAK2O60674 1132 aa18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 ZC3H6P61129 1189 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 DDX17Q92841 729 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-201ENST00000397901 C16orf45Q96MC5 204 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms