RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TPM3P06753 285 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 CAPN2P17655 700 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 CEBPZQ03701 1054 aaKnown RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 NMIQ13287 307 aaPredicted RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 EPHA10Q5JZY3 1008 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 CCDC129Q6ZRS4 1044 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 COPS6Q7L5N1 327 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 CCDC85AQ96PX6 553 aaPredicted RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 TTC12Q9H892 705 aaPredicted RBP5.95□□□□□ -1.46
SSR1-202ENST00000397511 EFCC1Q9HA90 598 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 ECHDC1Q9NTX5 307 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 LIMCH1Q9UPQ0 1083 aa5.95□□□□□ -1.46
SSR1-202ENST00000397511 WDR33Q9C0J8 1336 aaKnown RBP5.94□□□□□ -1.46
SSR1-202ENST00000397511 A0A0D9SFI3 127 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 GRM8O00222 908 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 ANAPC15P60006 121 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 ME3Q16798 604 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 KSR2Q6VAB6 950 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 DDX11Q96FC9 970 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 KAZALD1Q96I82 304 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 SEC62Q99442 399 aaKnown RBP5.94□□□□□ -1.46
SSR1-202ENST00000397511 TFIP11Q9UBB9 837 aaKnown RBP5.94□□□□□ -1.46
SSR1-202ENST00000397511 USP16Q9Y5T5 823 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 ERICH4A6NGS2 130 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 ZSCAN22P10073 491 aaPredicted RBP5.94□□□□□ -1.46
SSR1-202ENST00000397511 NCBP1Q09161 790 aaKnown RBP5.94□□□□□ -1.46
SSR1-202ENST00000397511 UBE3BQ7Z3V4 1068 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 ZNF589Q86UQ0 364 aaPredicted RBP5.94□□□□□ -1.46
SSR1-202ENST00000397511 XAGE3Q8WTP9 111 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 HYPKQ9NX55 129 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 RBM8AQ9Y5S9 174 aaKnown RBP5.94□□□□□ -1.46
SSR1-202ENST00000397511 FER1L4A9Z1Z3 1794 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 NWD1Q149M9 1564 aa5.94□□□□□ -1.46
SSR1-202ENST00000397511 RPAP1Q9BWH6 1393 aaPredicted RBP5.94□□□□□ -1.46
SSR1-202ENST00000397511 XRN1Q8IZH2 1706 aaKnown RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 FAM208AQ9UK61 1670 aaKnown RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 IGKV5-2P06315 115 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 SPC24Q8NBT2 197 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 KCNH5Q8NCM2 988 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 RAPGEF4Q8WZA2 1011 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 INTS4Q96HW7 963 aaKnown RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 GEMIN8Q9NWZ8 242 aaKnown RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 TPCN1Q9ULQ1 816 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 CYP46A1Q9Y6A2 500 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 CEMIPQ8WUJ3 1361 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 ADCY5O95622 1261 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 ZKSCAN1P17029 563 aaPredicted RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 LARP1BQ659C4 914 aaKnown RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 DDX46Q7L014 1031 aaKnown RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 KRT28Q7Z3Y7 464 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 PROSER2Q86WR7 435 aaPredicted RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 ZNF496Q96IT1 587 aaPredicted RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 TTC14Q96N46 770 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 NEUROD6Q96NK8 337 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 LTN1O94822 1766 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 CLGNO14967 610 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 F13A1P00488 732 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 HSP90AB4PQ58FF6 505 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 CREB3L3Q68CJ9 461 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 ZNF790Q6PG37 636 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 CDC37L1Q7L3B6 337 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 ARHGEF25Q86VW2 580 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 CKAP2LQ8IYA6 745 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 KIF18AQ8NI77 898 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 GPATCH3Q96I76 525 aa5.93□□□□□ -1.46
SSR1-202ENST00000397511 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.93□□□□□ -1.46
SSR1-202ENST00000397511 MMP14P50281 582 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 NEXNQ0ZGT2 675 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 CHST3Q7LGC8 479 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 KIAA1524Q8TCG1 905 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 RUFY2Q8WXA3 655 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 FBXW7Q969H0 707 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 FEZ2Q9UHY8 353 aaPredicted RBP5.92□□□□□ -1.46
SSR1-202ENST00000397511 SLIT1O75093 1534 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 CCDC171Q6TFL3 1326 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 SMTNL1A8MU46 457 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 GOLGA6L6A8MZA4 724 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 APPP05067 770 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 ST3GAL1Q11201 340 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 TFCP2Q12800 502 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 AXDND1Q5T1B0 1012 aaPredicted RBP5.92□□□□□ -1.46
SSR1-202ENST00000397511 HDAC5Q9UQL6 1122 aa5.92□□□□□ -1.46
SSR1-202ENST00000397511 ABCB7O75027 752 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 KDM4AO75164 1064 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 DDX58O95786 925 aaKnown RBP5.91□□□□□ -1.46
SSR1-202ENST00000397511 PDIA6Q15084 440 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 AMOTQ4VCS5 1084 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 TTC5Q8N0Z6 440 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 LINS1Q8NG48 757 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 EVI5LQ96CN4 794 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 A0A087WWV3 80 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 A0A087WZG4 1122 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 A0A0G2JLW4 131 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 SLC27A2O14975 620 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 JAK2O60674 1132 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 TIMM10P62072 90 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 NECTIN1Q15223 517 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 HSP90AB3PQ58FF7 597 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 ANKRD13DQ6ZTN6 518 aa5.91□□□□□ -1.46
SSR1-202ENST00000397511 TRERF1Q96PN7 1200 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms