RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 RFX5P48382 616 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-204ENST00000397443 ZNF594Q96JF6 807 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-204ENST00000397443 PDGFDQ9GZP0 370 aaPredicted RBP26.26■■□□□ 1.79
CPNE1-204ENST00000397443 GREM2Q9H772 168 aa26.26■■□□□ 1.79
CPNE1-204ENST00000397443 CCDC57Q2TAC2 916 aa26.26■■□□□ 1.79
CPNE1-204ENST00000397443 DDX60Q8IY21 1712 aaKnown RBP26.25■■□□□ 1.79
CPNE1-204ENST00000397443 CSF1RP07333 972 aa26.25■■□□□ 1.79
CPNE1-204ENST00000397443 TM4SF1P30408 202 aa26.25■■□□□ 1.79
CPNE1-204ENST00000397443 PTPN12Q05209 780 aaKnown RBP26.25■■□□□ 1.79
CPNE1-204ENST00000397443 DDR1Q08345 913 aa26.25■■□□□ 1.79
CPNE1-204ENST00000397443 NLGN1Q8N2Q7 840 aa26.25■■□□□ 1.79
CPNE1-204ENST00000397443 CNBD1Q8NA66 436 aa26.25■■□□□ 1.79
CPNE1-204ENST00000397443 SERPINB2P05120 415 aa26.24■■□□□ 1.79
CPNE1-204ENST00000397443 G3BP1Q13283 466 aaKnown RBP eCLIP26.24■■□□□ 1.792e-8■□□□□ 11.1
CPNE1-204ENST00000397443 C3orf67Q6ZVT6 689 aa26.24■■□□□ 1.79
CPNE1-204ENST00000397443 ITGA6P23229 1130 aa26.23■■□□□ 1.79
CPNE1-204ENST00000397443 IFIT5Q13325 482 aaKnown RBP26.23■■□□□ 1.79
CPNE1-204ENST00000397443 LRRCC1Q9C099 1032 aa26.23■■□□□ 1.79
CPNE1-204ENST00000397443 IL1RAPL2Q9NP60 686 aa26.23■■□□□ 1.79
CPNE1-204ENST00000397443 HSP90B1P14625 803 aaKnown RBP26.22■■□□□ 1.79
CPNE1-204ENST00000397443 PDE4AP27815 886 aa26.22■■□□□ 1.79
CPNE1-204ENST00000397443 TAF7LQ5H9L4 462 aa26.22■■□□□ 1.79
CPNE1-204ENST00000397443 NOP58Q9Y2X3 529 aaKnown RBP26.22■■□□□ 1.79
CPNE1-204ENST00000397443 POLRMTO00411 1230 aaKnown RBP26.22■■□□□ 1.79
CPNE1-204ENST00000397443 C16orf71Q8IYS4 520 aaPredicted RBP26.22■■□□□ 1.79
CPNE1-204ENST00000397443 MMP10P09238 476 aa26.21■■□□□ 1.79
CPNE1-204ENST00000397443 HSP90AB4PQ58FF6 505 aa26.21■■□□□ 1.79
CPNE1-204ENST00000397443 PRR5LQ6MZQ0 368 aa26.21■■□□□ 1.79
CPNE1-204ENST00000397443 COPRSQ9NQ92 184 aa26.21■■□□□ 1.79
CPNE1-204ENST00000397443 RAB11FIP3O75154 756 aa26.2■■□□□ 1.79
CPNE1-204ENST00000397443 ILDR2Q71H61 639 aa26.2■■□□□ 1.79
CPNE1-204ENST00000397443 RHPN1Q8TCX5 695 aa26.2■■□□□ 1.79
CPNE1-204ENST00000397443 LAMB2P55268 1798 aa26.2■■□□□ 1.78
CPNE1-204ENST00000397443 CCDC152Q4G0S7 254 aa26.2■■□□□ 1.78
CPNE1-204ENST00000397443 SEC31BQ9NQW1 1179 aa26.2■■□□□ 1.78
CPNE1-204ENST00000397443 ANKRD18BA2A2Z9 1011 aa26.19■■□□□ 1.78
CPNE1-204ENST00000397443 SLC10A5Q5PT55 438 aa26.18■■□□□ 1.78
CPNE1-204ENST00000397443 KIF1BPQ96EK5 621 aa26.18■■□□□ 1.78
CPNE1-204ENST00000397443 NLRP3Q96P20 1036 aa26.18■■□□□ 1.78
CPNE1-204ENST00000397443 PUS3Q9BZE2 481 aaKnown RBP26.18■■□□□ 1.78
CPNE1-204ENST00000397443 QSER1Q2KHR3 1735 aa26.18■■□□□ 1.78
CPNE1-204ENST00000397443 LRRC24Q50LG9 513 aa26.18■■□□□ 1.78
CPNE1-204ENST00000397443 OTUD7AQ8TE49 926 aaPredicted RBP26.18■■□□□ 1.78
CPNE1-204ENST00000397443 ST5P78524 1137 aa26.17■■□□□ 1.78
CPNE1-204ENST00000397443 SASH1O94885 1247 aa26.16■■□□□ 1.78
CPNE1-204ENST00000397443 PARP3Q9Y6F1 533 aa26.16■■□□□ 1.78
CPNE1-204ENST00000397443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.16■■□□□ 1.78
CPNE1-204ENST00000397443 ERC1Q8IUD2 1116 aa26.16■■□□□ 1.78
CPNE1-204ENST00000397443 CASZ1Q86V15 1759 aa26.15■■□□□ 1.78
CPNE1-204ENST00000397443 EYA2O00167 538 aa26.14■■□□□ 1.78
CPNE1-204ENST00000397443 PELP1Q8IZL8 1130 aaKnown RBP26.14■■□□□ 1.78
CPNE1-204ENST00000397443 TNRC6CQ9HCJ0 1690 aaKnown RBP26.14■■□□□ 1.78
CPNE1-204ENST00000397443 TFCP2Q12800 502 aa26.14■■□□□ 1.77
CPNE1-204ENST00000397443 LDHAL6AQ6ZMR3 332 aa26.14■■□□□ 1.77
CPNE1-204ENST00000397443 R3HDM1Q15032 1099 aaKnown RBP26.13■■□□□ 1.77
CPNE1-204ENST00000397443 SF3B3Q15393 1217 aaKnown RBP26.13■■□□□ 1.77
CPNE1-204ENST00000397443 ATG9AQ7Z3C6 839 aa26.13■■□□□ 1.77
CPNE1-204ENST00000397443 CNNM1Q9NRU3 951 aa26.12■■□□□ 1.77
CPNE1-204ENST00000397443 TAF1P21675 1872 aa26.12■■□□□ 1.77
CPNE1-204ENST00000397443 IL15P40933 162 aaPredicted RBP26.1■■□□□ 1.77
CPNE1-204ENST00000397443 CLASRPQ8N2M8 674 aaKnown RBP26.1■■□□□ 1.77
CPNE1-204ENST00000397443 TSHZ3Q63HK5 1081 aa26.1■■□□□ 1.77
CPNE1-204ENST00000397443 AACSQ86V21 672 aa26.1■■□□□ 1.77
CPNE1-204ENST00000397443 PLEKHM2Q8IWE5 1019 aa26.1■■□□□ 1.77
CPNE1-204ENST00000397443 MPHOSPH8Q99549 860 aa26.1■■□□□ 1.77
CPNE1-204ENST00000397443 COL4A1P02462 1669 aa26.1■■□□□ 1.77
CPNE1-204ENST00000397443 ZBTB7AO95365 584 aa26.09■■□□□ 1.77
CPNE1-204ENST00000397443 IGHMBP2P38935 993 aaKnown RBP26.09■■□□□ 1.77
CPNE1-204ENST00000397443 SPEF2Q9C093 1822 aa26.09■■□□□ 1.77
CPNE1-204ENST00000397443 RTL9Q8NET4 1388 aa26.08■■□□□ 1.77
CPNE1-204ENST00000397443 PSDA5PKW4 1024 aaPredicted RBP26.08■■□□□ 1.77
CPNE1-204ENST00000397443 CIAO1O76071 339 aa26.08■■□□□ 1.77
CPNE1-204ENST00000397443 CDC5LQ99459 802 aaKnown RBP26.08■■□□□ 1.77
CPNE1-204ENST00000397443 CELF1Q92879 486 aaKnown RBP26.08■■□□□ 1.76
CPNE1-204ENST00000397443 DDX46Q7L014 1031 aaKnown RBP26.07■■□□□ 1.76
CPNE1-204ENST00000397443 ANKRD18AQ8IVF6 992 aa26.07■■□□□ 1.76
CPNE1-204ENST00000397443 CCDC8Q9H0W5 538 aaPredicted RBP26.07■■□□□ 1.76
CPNE1-204ENST00000397443 METTL24Q5JXM2 366 aa26.06■■□□□ 1.76
CPNE1-204ENST00000397443 EAF2Q96CJ1 260 aaPredicted RBP26.06■■□□□ 1.76
CPNE1-204ENST00000397443 CEP126Q9P2H0 1117 aa26.06■■□□□ 1.76
CPNE1-204ENST00000397443 IFIT2P09913 472 aaKnown RBP26.06■■□□□ 1.76
CPNE1-204ENST00000397443 RPGRQ92834 1020 aaKnown RBP26.06■■□□□ 1.76
CPNE1-204ENST00000397443 RIPOR2Q9Y4F9 1068 aa26.06■■□□□ 1.76
CPNE1-204ENST00000397443 MX1P20591 662 aa26.05■■□□□ 1.76
CPNE1-204ENST00000397443 HELBQ8NG08 1087 aaPredicted RBP26.05■■□□□ 1.76
CPNE1-204ENST00000397443 SLC16A10Q8TF71 515 aa26.05■■□□□ 1.76
CPNE1-204ENST00000397443 TLR7Q9NYK1 1049 aaKnown RBP26.05■■□□□ 1.76
CPNE1-204ENST00000397443 NRXN2Q9P2S2 1712 aa26.04■■□□□ 1.76
CPNE1-204ENST00000397443 TNNI3KQ59H18 835 aa26.04■■□□□ 1.76
CPNE1-204ENST00000397443 FBXO3Q9UK99 471 aa26.04■■□□□ 1.76
CPNE1-204ENST00000397443 ATF5Q9Y2D1 282 aaPredicted RBP26.04■■□□□ 1.76
CPNE1-204ENST00000397443 FPGT-TNNI3KV9GXZ4 949 aa26.04■■□□□ 1.76
CPNE1-204ENST00000397443 PDE1AP54750 535 aa26.04■■□□□ 1.76
CPNE1-204ENST00000397443 NEUROD6Q96NK8 337 aa26.03■■□□□ 1.76
CPNE1-204ENST00000397443 BRIP1Q9BX63 1249 aa26.03■■□□□ 1.76
CPNE1-204ENST00000397443 ANKRD31Q8N7Z5 1873 aa26.03■■□□□ 1.76
CPNE1-204ENST00000397443 RIC1Q4ADV7 1423 aa26.03■■□□□ 1.76
CPNE1-204ENST00000397443 RPS8P62241 208 aaKnown RBP26.02■■□□□ 1.76
CPNE1-204ENST00000397443 CRY2Q49AN0 593 aa26.02■■□□□ 1.76
CPNE1-204ENST00000397443 LRP5O75197 1615 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms