RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 CCDC88AQ3V6T2 1871 aa10.74□□□□□ -0.69
NUP98-206ENST00000397013 IQCA1LA6NCM1 817 aa10.74□□□□□ -0.69
NUP98-206ENST00000397013 C2orf72A6NCS6 295 aa10.74□□□□□ -0.69
NUP98-206ENST00000397013 FZD9O00144 591 aa10.74□□□□□ -0.69
NUP98-206ENST00000397013 SMYD5Q6GMV2 418 aa10.74□□□□□ -0.69
NUP98-206ENST00000397013 CLEC4GQ6UXB4 293 aa10.74□□□□□ -0.69
NUP98-206ENST00000397013 TPTE2Q6XPS3 522 aa10.74□□□□□ -0.69
NUP98-206ENST00000397013 C3orf67Q6ZVT6 689 aa10.74□□□□□ -0.69
NUP98-206ENST00000397013 UBR2Q8IWV8 1755 aa10.74□□□□□ -0.69
NUP98-206ENST00000397013 TESPA1A2RU30 521 aaPredicted RBP10.73□□□□□ -0.69
NUP98-206ENST00000397013 HSPA8P11142 646 aaKnown RBP10.73□□□□□ -0.69
NUP98-206ENST00000397013 PRKCSHP14314 528 aaPredicted RBP10.73□□□□□ -0.69
NUP98-206ENST00000397013 IARSP41252 1262 aaKnown RBP10.73□□□□□ -0.69
NUP98-206ENST00000397013 CTCFP49711 727 aaPredicted RBP10.73□□□□□ -0.69
NUP98-206ENST00000397013 DEFB115Q30KQ5 88 aa10.73□□□□□ -0.69
NUP98-206ENST00000397013 SOGA3Q5TF21 947 aa10.73□□□□□ -0.69
NUP98-206ENST00000397013 TTLL7Q6ZT98 887 aa10.73□□□□□ -0.69
NUP98-206ENST00000397013 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.73□□□□□ -0.69
NUP98-206ENST00000397013 PRDM10Q9NQV6 1147 aa10.73□□□□□ -0.69
NUP98-206ENST00000397013 GJA3Q9Y6H8 435 aa10.73□□□□□ -0.69
NUP98-206ENST00000397013 FER1L6Q2WGJ9 1857 aa10.72□□□□□ -0.69
NUP98-206ENST00000397013 SPDYE16A6NNV3 312 aaPredicted RBP10.72□□□□□ -0.69
NUP98-206ENST00000397013 TRAF5O00463 557 aa10.72□□□□□ -0.69
NUP98-206ENST00000397013 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
NUP98-206ENST00000397013 EPS15P42566 896 aa10.72□□□□□ -0.69
NUP98-206ENST00000397013 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.691e-7■■□□□ 11.9
NUP98-206ENST00000397013 PLPP6Q8IY26 295 aa10.72□□□□□ -0.69
NUP98-206ENST00000397013 RTKN2Q8IZC4 609 aa10.72□□□□□ -0.69
NUP98-206ENST00000397013 ABCC12Q96J65 1359 aa10.72□□□□□ -0.69
NUP98-206ENST00000397013 COL4A5P29400 1685 aa10.72□□□□□ -0.69
NUP98-206ENST00000397013 RASSF10A6NK89 507 aa10.71□□□□□ -0.69
NUP98-206ENST00000397013 GPTP24298 496 aa10.71□□□□□ -0.69
NUP98-206ENST00000397013 GTF2E1P29083 439 aaPredicted RBP10.71□□□□□ -0.69
NUP98-206ENST00000397013 SCN7AQ01118 1682 aa10.71□□□□□ -0.69
NUP98-206ENST00000397013 GRM1Q13255 1194 aa10.71□□□□□ -0.69
NUP98-206ENST00000397013 CST9Q5W186 159 aa10.71□□□□□ -0.69
NUP98-206ENST00000397013 AIDAQ96BJ3 306 aa10.71□□□□□ -0.69
NUP98-206ENST00000397013 THUMPD2Q9BTF0 503 aaKnown RBP10.71□□□□□ -0.69
NUP98-206ENST00000397013 WDR33Q9C0J8 1336 aaKnown RBP10.71□□□□□ -0.69
NUP98-206ENST00000397013 TSKSQ9UJT2 592 aa10.71□□□□□ -0.69
NUP98-206ENST00000397013 ABT1Q9ULW3 272 aaKnown RBP10.71□□□□□ -0.69
NUP98-206ENST00000397013 ZNF652Q9Y2D9 606 aa10.71□□□□□ -0.69
NUP98-206ENST00000397013 RRP7AQ9Y3A4 280 aaKnown RBP10.71□□□□□ -0.69
NUP98-206ENST00000397013 SNED1Q8TER0 1413 aa10.7□□□□□ -0.7
NUP98-206ENST00000397013 PPP2R1AP30153 589 aa10.7□□□□□ -0.7
NUP98-206ENST00000397013 SCNN1DP51172 638 aa10.7□□□□□ -0.7
NUP98-206ENST00000397013 SUSD4Q5VX71 490 aa10.7□□□□□ -0.7
NUP98-206ENST00000397013 CYP4F22Q6NT55 531 aa10.7□□□□□ -0.7
NUP98-206ENST00000397013 GPC2Q8N158 579 aa10.7□□□□□ -0.7
NUP98-206ENST00000397013 RTF1Q92541 710 aaKnown RBP10.7□□□□□ -0.7
NUP98-206ENST00000397013 ABHD8Q96I13 439 aa10.7□□□□□ -0.7
NUP98-206ENST00000397013 DDX21Q9NR30 783 aaKnown RBP eCLIP10.7□□□□□ -0.7
NUP98-206ENST00000397013 UBN2Q6ZU65 1347 aa10.69□□□□□ -0.7
NUP98-206ENST00000397013 SEMA3EO15041 775 aa10.69□□□□□ -0.7
NUP98-206ENST00000397013 AOC2O75106 756 aa10.69□□□□□ -0.7
NUP98-206ENST00000397013 MYL6BP14649 208 aa10.69□□□□□ -0.7
NUP98-206ENST00000397013 ALDH1B1P30837 517 aa10.69□□□□□ -0.7
NUP98-206ENST00000397013 TAF7Q15545 349 aaPredicted RBP10.69□□□□□ -0.7
NUP98-206ENST00000397013 CRY2Q49AN0 593 aa10.69□□□□□ -0.7
NUP98-206ENST00000397013 DLK2Q6UY11 383 aa10.69□□□□□ -0.7
NUP98-206ENST00000397013 PNMA8AQ86V59 439 aaPredicted RBP10.69□□□□□ -0.7
NUP98-206ENST00000397013 ZNF428Q96B54 188 aa10.69□□□□□ -0.7
NUP98-206ENST00000397013 ZBTB3Q9H5J0 574 aa10.69□□□□□ -0.7
NUP98-206ENST00000397013 NPC1L1Q9UHC9 1359 aa10.68□□□□□ -0.7
NUP98-206ENST00000397013 JDP2Q8WYK2 163 aa10.68□□□□□ -0.7
NUP98-206ENST00000397013 CAPNS2Q96L46 248 aa10.68□□□□□ -0.7
NUP98-206ENST00000397013 PSMD1Q99460 953 aa10.68□□□□□ -0.7
NUP98-206ENST00000397013 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
NUP98-206ENST00000397013 VIRMAQ69YN4 1812 aaKnown RBP10.68□□□□□ -0.7
NUP98-206ENST00000397013 SIPA1L3O60292 1781 aaPredicted RBP10.67□□□□□ -0.7
NUP98-206ENST00000397013 DICER1Q9UPY3 1922 aaKnown RBP10.67□□□□□ -0.7
NUP98-206ENST00000397013 HOXA10P31260 410 aaPredicted RBP10.67□□□□□ -0.7
NUP98-206ENST00000397013 EIF6P56537 245 aaKnown RBP10.67□□□□□ -0.7
NUP98-206ENST00000397013 EIF4A1P60842 406 aaKnown RBP10.67□□□□□ -0.7
NUP98-206ENST00000397013 FAM161AQ3B820 660 aa10.67□□□□□ -0.7
NUP98-206ENST00000397013 TMEM92Q6UXU6 159 aa10.67□□□□□ -0.7
NUP98-206ENST00000397013 LARGE2Q8N3Y3 721 aa10.67□□□□□ -0.7
NUP98-206ENST00000397013 CFAP53Q96M91 514 aa10.67□□□□□ -0.7
NUP98-206ENST00000397013 CACNA1SQ13698 1873 aa10.67□□□□□ -0.7
NUP98-206ENST00000397013 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
NUP98-206ENST00000397013 SHTN1A0MZ66 631 aa10.66□□□□□ -0.7
NUP98-206ENST00000397013 CCDC85CA6NKD9 419 aa10.66□□□□□ -0.7
NUP98-206ENST00000397013 ANXA1P04083 346 aa10.66□□□□□ -0.7
NUP98-206ENST00000397013 PDIA6Q15084 440 aa10.66□□□□□ -0.7
NUP98-206ENST00000397013 AOC3Q16853 763 aa10.66□□□□□ -0.7
NUP98-206ENST00000397013 ZNF34Q8IZ26 560 aa10.66□□□□□ -0.7
NUP98-206ENST00000397013 RPGRQ92834 1020 aaKnown RBP10.66□□□□□ -0.7
NUP98-206ENST00000397013 GPR101Q96P66 508 aaPredicted RBP10.66□□□□□ -0.7
NUP98-206ENST00000397013 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
NUP98-206ENST00000397013 LTBP1Q14766 1721 aa10.65□□□□□ -0.7
NUP98-206ENST00000397013 ERVV-1B6SEH8 477 aa10.65□□□□□ -0.7
NUP98-206ENST00000397013 PPEF1O14829 653 aaPredicted RBP10.65□□□□□ -0.7
NUP98-206ENST00000397013 NTSR2O95665 410 aa10.65□□□□□ -0.7
NUP98-206ENST00000397013 HIRAP54198 1017 aaPredicted RBP10.65□□□□□ -0.7
NUP98-206ENST00000397013 MAP2K1Q02750 393 aaPredicted RBP10.65□□□□□ -0.7
NUP98-206ENST00000397013 CXCL9Q07325 125 aa10.65□□□□□ -0.7
NUP98-206ENST00000397013 PROSER3Q2NL68 480 aa10.65□□□□□ -0.7
NUP98-206ENST00000397013 RBM17Q96I25 401 aaKnown RBP10.65□□□□□ -0.7
NUP98-206ENST00000397013 ZIC5Q96T25 663 aa10.65□□□□□ -0.7
NUP98-206ENST00000397013 GLIS2Q9BZE0 524 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms