RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CPA1P15085 419 aa20.13■□□□□ 0.81
NUP50-202ENST00000396096 USPL1Q5W0Q7 1092 aa20.13■□□□□ 0.81
NUP50-202ENST00000396096 SPEF2Q9C093 1822 aa20.13■□□□□ 0.81
NUP50-202ENST00000396096 WNK3Q9BYP7 1800 aa20.13■□□□□ 0.81
NUP50-202ENST00000396096 TAF5LO75529 589 aa20.13■□□□□ 0.81
NUP50-202ENST00000396096 KCNJ4P48050 445 aa20.13■□□□□ 0.81
NUP50-202ENST00000396096 TCIRG1Q13488 830 aa20.13■□□□□ 0.81
NUP50-202ENST00000396096 ZSCAN23Q3MJ62 389 aa20.13■□□□□ 0.81
NUP50-202ENST00000396096 CAVIN1Q6NZI2 390 aaKnown RBP20.13■□□□□ 0.81
NUP50-202ENST00000396096 PIGBQ92521 554 aa20.13■□□□□ 0.81
NUP50-202ENST00000396096 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
NUP50-202ENST00000396096 ZNF589Q86UQ0 364 aaPredicted RBP20.12■□□□□ 0.81
NUP50-202ENST00000396096 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
NUP50-202ENST00000396096 EDC3Q96F86 508 aaKnown RBP20.12■□□□□ 0.81
NUP50-202ENST00000396096 BTG4Q9NY30 223 aa20.12■□□□□ 0.81
NUP50-202ENST00000396096 PALLDQ8WX93 1383 aa20.12■□□□□ 0.81
NUP50-202ENST00000396096 ZNF609O15014 1411 aa20.12■□□□□ 0.81
NUP50-202ENST00000396096 AHDC1Q5TGY3 1603 aaPredicted RBP20.12■□□□□ 0.81
NUP50-202ENST00000396096 EYA2O00167 538 aa20.11■□□□□ 0.81
NUP50-202ENST00000396096 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.11■□□□□ 0.81
NUP50-202ENST00000396096 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
NUP50-202ENST00000396096 COL16A1Q07092 1604 aaPredicted RBP20.11■□□□□ 0.81
NUP50-202ENST00000396096 LARGE1O95461 756 aa20.11■□□□□ 0.81
NUP50-202ENST00000396096 CHAMP1Q96JM3 812 aa20.11■□□□□ 0.81
NUP50-202ENST00000396096 FBXO3Q9UK99 471 aa20.11■□□□□ 0.81
NUP50-202ENST00000396096 SMC3Q9UQE7 1217 aa20.11■□□□□ 0.81
NUP50-202ENST00000396096 NCLP19338 710 aaKnown RBP20.1■□□□□ 0.81
NUP50-202ENST00000396096 KBTBD3Q8NAB2 608 aa20.1■□□□□ 0.81
NUP50-202ENST00000396096 TMEM87AQ8NBN3 555 aa20.1■□□□□ 0.81
NUP50-202ENST00000396096 PLA2G12BQ9BX93 195 aa20.1■□□□□ 0.81
NUP50-202ENST00000396096 RTN4Q9NQC3 1192 aaKnown RBP20.1■□□□□ 0.81
NUP50-202ENST00000396096 ASAP1Q9ULH1 1129 aa20.1■□□□□ 0.81
NUP50-202ENST00000396096 BCL9O00512 1426 aa20.1■□□□□ 0.81
NUP50-202ENST00000396096 ZSCAN22P10073 491 aaPredicted RBP20.09■□□□□ 0.81
NUP50-202ENST00000396096 DNAJC10Q8IXB1 793 aa20.09■□□□□ 0.81
NUP50-202ENST00000396096 SH3TC1Q8TE82 1336 aa20.09■□□□□ 0.81
NUP50-202ENST00000396096 STX6O43752 255 aa20.09■□□□□ 0.81
NUP50-202ENST00000396096 STARD3NLO95772 234 aa20.09■□□□□ 0.81
NUP50-202ENST00000396096 PCCAP05165 728 aaPredicted RBP20.09■□□□□ 0.81
NUP50-202ENST00000396096 ANKRD1Q15327 319 aa20.09■□□□□ 0.81
NUP50-202ENST00000396096 ANKRD36CQ5JPF3 1778 aa20.09■□□□□ 0.81
NUP50-202ENST00000396096 ROBO1Q9Y6N7 1651 aa20.08■□□□□ 0.81
NUP50-202ENST00000396096 SYT1P21579 422 aa20.08■□□□□ 0.81
NUP50-202ENST00000396096 RPS6KB1P23443 525 aa20.08■□□□□ 0.81
NUP50-202ENST00000396096 KRT32Q14532 448 aa20.08■□□□□ 0.81
NUP50-202ENST00000396096 MCMDC2Q4G0Z9 681 aa20.08■□□□□ 0.81
NUP50-202ENST00000396096 BLOC1S2Q6QNY1 142 aa20.08■□□□□ 0.81
NUP50-202ENST00000396096 KIF6Q6ZMV9 814 aa20.08■□□□□ 0.81
NUP50-202ENST00000396096 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.08■□□□□ 0.81
NUP50-202ENST00000396096 DNAJC2Q99543 621 aaKnown RBP20.08■□□□□ 0.81
NUP50-202ENST00000396096 PDIA4P13667 645 aaKnown RBP20.07■□□□□ 0.8
NUP50-202ENST00000396096 ST3GAL1Q11201 340 aa20.07■□□□□ 0.8
NUP50-202ENST00000396096 ME3Q16798 604 aa20.07■□□□□ 0.8
NUP50-202ENST00000396096 CCDC83Q8IWF9 413 aa20.07■□□□□ 0.8
NUP50-202ENST00000396096 LARP6Q9BRS8 491 aaKnown RBP20.07■□□□□ 0.8
NUP50-202ENST00000396096 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
NUP50-202ENST00000396096 TCHHQ07283 1943 aa20.07■□□□□ 0.8
NUP50-202ENST00000396096 LRRC24Q50LG9 513 aa20.07■□□□□ 0.8
NUP50-202ENST00000396096 TMEM63CQ9P1W3 806 aa20.07■□□□□ 0.8
NUP50-202ENST00000396096 MAP3K15Q6ZN16 1313 aa20.06■□□□□ 0.8
NUP50-202ENST00000396096 TPCN1Q9ULQ1 816 aa20.06■□□□□ 0.8
NUP50-202ENST00000396096 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
NUP50-202ENST00000396096 CDHR2Q9BYE9 1310 aa20.06■□□□□ 0.8
NUP50-202ENST00000396096 CSF1RP07333 972 aa20.05■□□□□ 0.8
NUP50-202ENST00000396096 GJB2P29033 226 aa20.05■□□□□ 0.8
NUP50-202ENST00000396096 NEUROD6Q96NK8 337 aa20.05■□□□□ 0.8
NUP50-202ENST00000396096 HELLSQ9NRZ9 838 aa20.05■□□□□ 0.8
NUP50-202ENST00000396096 PAG1Q9NWQ8 432 aa20.05■□□□□ 0.8
NUP50-202ENST00000396096 RBM27Q9P2N5 1060 aaKnown RBP20.05■□□□□ 0.8
NUP50-202ENST00000396096 ATP6V1DQ9Y5K8 247 aa20.05■□□□□ 0.8
NUP50-202ENST00000396096 NDUFB9Q9Y6M9 179 aa20.05■□□□□ 0.8
NUP50-202ENST00000396096 F13A1P00488 732 aa20.05■□□□□ 0.8
NUP50-202ENST00000396096 NASPP49321 788 aaPredicted RBP20.05■□□□□ 0.8
NUP50-202ENST00000396096 GIGYF2Q6Y7W6 1299 aaKnown RBP20.05■□□□□ 0.8
NUP50-202ENST00000396096 DDX46Q7L014 1031 aaKnown RBP20.05■□□□□ 0.8
NUP50-202ENST00000396096 ZBTB38Q8NAP3 1195 aaPredicted RBP20.05■□□□□ 0.8
NUP50-202ENST00000396096 ZNF594Q96JF6 807 aaPredicted RBP20.05■□□□□ 0.8
NUP50-202ENST00000396096 TIMM10P62072 90 aa20.04■□□□□ 0.8
NUP50-202ENST00000396096 CCDC57Q2TAC2 916 aa20.04■□□□□ 0.8
NUP50-202ENST00000396096 TAF6LQ9Y6J9 622 aa20.04■□□□□ 0.8
NUP50-202ENST00000396096 A0A1B0GUL7 405 aa20.03■□□□□ 0.8
NUP50-202ENST00000396096 TOB2Q14106 344 aaPredicted RBP20.03■□□□□ 0.8
NUP50-202ENST00000396096 HSP90AB3PQ58FF7 597 aa20.03■□□□□ 0.8
NUP50-202ENST00000396096 LRSAM1Q6UWE0 723 aa20.03■□□□□ 0.8
NUP50-202ENST00000396096 CEP126Q9P2H0 1117 aa20.03■□□□□ 0.8
NUP50-202ENST00000396096 MTMR6Q9Y217 621 aa20.03■□□□□ 0.8
NUP50-202ENST00000396096 CYP19A1P11511 503 aaPredicted RBP20.03■□□□□ 0.8
NUP50-202ENST00000396096 COL9A3Q14050 684 aaPredicted RBP20.03■□□□□ 0.8
NUP50-202ENST00000396096 ZMYM1Q5SVZ6 1142 aa20.03■□□□□ 0.8
NUP50-202ENST00000396096 USP48Q86UV5 1035 aa20.03■□□□□ 0.8
NUP50-202ENST00000396096 PPP1R9BQ96SB3 815 aa20.03■□□□□ 0.8
NUP50-202ENST00000396096 PUS3Q9BZE2 481 aaKnown RBP20.03■□□□□ 0.8
NUP50-202ENST00000396096 MYH3P11055 1940 aa20.02■□□□□ 0.8
NUP50-202ENST00000396096 GOLIM4O00461 696 aa20.02■□□□□ 0.8
NUP50-202ENST00000396096 SYAP1Q96A49 352 aaPredicted RBP20.02■□□□□ 0.8
NUP50-202ENST00000396096 SEC62Q99442 399 aaKnown RBP20.02■□□□□ 0.8
NUP50-202ENST00000396096 AKAP2Q9Y2D5 859 aa20.02■□□□□ 0.8
NUP50-202ENST00000396096 CCDC173Q0VFZ6 552 aa20.01■□□□□ 0.79
NUP50-202ENST00000396096 CCDC129Q6ZRS4 1044 aa20.01■□□□□ 0.79
NUP50-202ENST00000396096 SLC4A9Q96Q91 983 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms