RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 ANKRD13DQ6ZTN6 518 aa28.71■■■□□ 2.19
PARD6B-202ENST00000396039 AIDAQ96BJ3 306 aa28.71■■■□□ 2.19
PARD6B-202ENST00000396039 RASSF10A6NK89 507 aa28.7■■■□□ 2.18
PARD6B-202ENST00000396039 PRKRIP1Q9H875 184 aaPredicted RBP28.69■■■□□ 2.18
PARD6B-202ENST00000396039 TAF1P21675 1872 aa28.69■■■□□ 2.18
PARD6B-202ENST00000396039 EPS15P42566 896 aa28.68■■■□□ 2.18
PARD6B-202ENST00000396039 VEGFBP49765 207 aa28.68■■■□□ 2.18
PARD6B-202ENST00000396039 KIAA2012Q0VF49 1180 aa28.68■■■□□ 2.18
PARD6B-202ENST00000396039 ADARB2Q9NS39 739 aaKnown RBP28.68■■■□□ 2.18
PARD6B-202ENST00000396039 DEFB115Q30KQ5 88 aa28.67■■■□□ 2.18
PARD6B-202ENST00000396039 DUSP27Q5VZP5 1158 aa28.67■■■□□ 2.18
PARD6B-202ENST00000396039 CHMP4AQ9BY43 222 aa28.67■■■□□ 2.18
PARD6B-202ENST00000396039 GPRC5DQ9NZD1 345 aa28.67■■■□□ 2.18
PARD6B-202ENST00000396039 HSP90B1P14625 803 aaKnown RBP28.66■■■□□ 2.18
PARD6B-202ENST00000396039 TNIP1Q15025 636 aa28.66■■■□□ 2.18
PARD6B-202ENST00000396039 ISCA1Q9BUE6 129 aa28.66■■■□□ 2.18
PARD6B-202ENST00000396039 ABT1Q9ULW3 272 aaKnown RBP28.66■■■□□ 2.18
PARD6B-202ENST00000396039 CIAPIN1Q6FI81 312 aa28.65■■■□□ 2.18
PARD6B-202ENST00000396039 SLC51AQ86UW1 340 aa28.65■■■□□ 2.18
PARD6B-202ENST00000396039 IFT57Q9NWB7 429 aa28.65■■■□□ 2.18
PARD6B-202ENST00000396039 GNAI1P63096 354 aa28.64■■■□□ 2.18
PARD6B-202ENST00000396039 CXCL9Q07325 125 aa28.64■■■□□ 2.18
PARD6B-202ENST00000396039 TRIM28Q13263 835 aaKnown RBP28.64■■■□□ 2.18
PARD6B-202ENST00000396039 PRDM10Q9NQV6 1147 aa28.64■■■□□ 2.18
PARD6B-202ENST00000396039 MBIPQ9NS73 344 aa28.64■■■□□ 2.18
PARD6B-202ENST00000396039 CTCFP49711 727 aaPredicted RBP28.63■■■□□ 2.17
PARD6B-202ENST00000396039 GOLGA2Q08379 1002 aa28.63■■■□□ 2.17
PARD6B-202ENST00000396039 SF3B3Q15393 1217 aaKnown RBP28.63■■■□□ 2.17
PARD6B-202ENST00000396039 DUOX1Q9NRD9 1551 aa28.62■■■□□ 2.17
PARD6B-202ENST00000396039 ZNF853P0CG23 659 aa28.62■■■□□ 2.17
PARD6B-202ENST00000396039 THSD7BQ9C0I4 1608 aa28.61■■■□□ 2.17
PARD6B-202ENST00000396039 FOXN1O15353 648 aa28.61■■■□□ 2.17
PARD6B-202ENST00000396039 MAP2K1Q02750 393 aaPredicted RBP28.61■■■□□ 2.17
PARD6B-202ENST00000396039 BCL2L13Q9BXK5 485 aa28.61■■■□□ 2.17
PARD6B-202ENST00000396039 ECE1P42892 770 aa28.6■■■□□ 2.17
PARD6B-202ENST00000396039 RIC3Q7Z5B4 369 aa28.6■■■□□ 2.17
PARD6B-202ENST00000396039 FAM89AQ96GI7 184 aa28.6■■■□□ 2.17
PARD6B-202ENST00000396039 WDR33Q9C0J8 1336 aaKnown RBP28.6■■■□□ 2.17
PARD6B-202ENST00000396039 ATP5J2-PTCD1G3V325 749 aa28.59■■■□□ 2.17
PARD6B-202ENST00000396039 GMPSP49915 693 aaPredicted RBP28.59■■■□□ 2.17
PARD6B-202ENST00000396039 WBP1LQ9NX94 342 aa28.59■■■□□ 2.17
PARD6B-202ENST00000396039 APAF1O14727 1248 aa28.58■■■□□ 2.17
PARD6B-202ENST00000396039 ZC3H15Q8WU90 426 aaKnown RBP28.58■■■□□ 2.17
PARD6B-202ENST00000396039 IRS4O14654 1257 aaPredicted RBP28.57■■■□□ 2.16
PARD6B-202ENST00000396039 CAPN15O75808 1086 aa28.57■■■□□ 2.16
PARD6B-202ENST00000396039 WASHC4Q2M389 1173 aa28.57■■■□□ 2.16
PARD6B-202ENST00000396039 RAD17O75943 681 aa28.56■■■□□ 2.16
PARD6B-202ENST00000396039 ZBTB38Q8NAP3 1195 aaPredicted RBP28.56■■■□□ 2.16
PARD6B-202ENST00000396039 EYA3Q99504 573 aa28.56■■■□□ 2.16
PARD6B-202ENST00000396039 NSFL1CQ9UNZ2 370 aaKnown RBP28.56■■■□□ 2.16
PARD6B-202ENST00000396039 H7C1D1 291 aa28.54■■■□□ 2.16
PARD6B-202ENST00000396039 DDX58O95786 925 aaKnown RBP28.54■■■□□ 2.16
PARD6B-202ENST00000396039 CELF1Q92879 486 aaKnown RBP28.54■■■□□ 2.16
PARD6B-202ENST00000396039 PGAP2Q9UHJ9 254 aa28.54■■■□□ 2.16
PARD6B-202ENST00000396039 PAXIP1Q6ZW49 1069 aaPredicted RBP28.53■■■□□ 2.16
PARD6B-202ENST00000396039 CCDC191Q8NCU4 936 aa28.53■■■□□ 2.16
PARD6B-202ENST00000396039 TLL2Q9Y6L7 1015 aa28.53■■■□□ 2.16
PARD6B-202ENST00000396039 CCDC30Q5VVM6 783 aa28.52■■■□□ 2.16
PARD6B-202ENST00000396039 DPF2Q92785 391 aa28.52■■■□□ 2.16
PARD6B-202ENST00000396039 CAPNS2Q96L46 248 aa28.52■■■□□ 2.16
PARD6B-202ENST00000396039 CNOT7Q9UIV1 285 aaKnown RBP28.52■■■□□ 2.16
PARD6B-202ENST00000396039 YDJCA8MPS7 323 aa28.51■■■□□ 2.15
PARD6B-202ENST00000396039 C6orf229H3BNL8 230 aa28.51■■■□□ 2.15
PARD6B-202ENST00000396039 TRAF5O00463 557 aa28.51■■■□□ 2.15
PARD6B-202ENST00000396039 RPS8P62241 208 aaKnown RBP28.51■■■□□ 2.15
PARD6B-202ENST00000396039 RTL5Q5HYW3 569 aaPredicted RBP28.51■■■□□ 2.15
PARD6B-202ENST00000396039 BEGAINQ9BUH8 593 aa28.51■■■□□ 2.15
PARD6B-202ENST00000396039 RPS12P25398 132 aaKnown RBP28.5■■■□□ 2.15
PARD6B-202ENST00000396039 CCDC152Q4G0S7 254 aa28.5■■■□□ 2.15
PARD6B-202ENST00000396039 CST9Q5W186 159 aa28.5■■■□□ 2.15
PARD6B-202ENST00000396039 ZNF428Q96B54 188 aa28.5■■■□□ 2.15
PARD6B-202ENST00000396039 PHAXQ9H814 394 aaKnown RBP28.5■■■□□ 2.15
PARD6B-202ENST00000396039 MYH3P11055 1940 aa28.49■■■□□ 2.15
PARD6B-202ENST00000396039 PCCAP05165 728 aaPredicted RBP28.49■■■□□ 2.15
PARD6B-202ENST00000396039 CDC37L1Q7L3B6 337 aa28.49■■■□□ 2.15
PARD6B-202ENST00000396039 HHIPL1Q96JK4 782 aa28.49■■■□□ 2.15
PARD6B-202ENST00000396039 MYD88Q99836 296 aa28.49■■■□□ 2.15
PARD6B-202ENST00000396039 CELF2O95319 508 aaKnown RBP28.48■■■□□ 2.15
PARD6B-202ENST00000396039 GPSM2P81274 684 aa28.48■■■□□ 2.15
PARD6B-202ENST00000396039 MICALL2Q8IY33 904 aa28.48■■■□□ 2.15
PARD6B-202ENST00000396039 CWC25Q9NXE8 425 aaPredicted RBP28.48■■■□□ 2.15
PARD6B-202ENST00000396039 PODXL2Q9NZ53 605 aa28.48■■■□□ 2.15
PARD6B-202ENST00000396039 ELL2O00472 640 aaPredicted RBP28.47■■■□□ 2.15
PARD6B-202ENST00000396039 PDE8AO60658 829 aa28.47■■■□□ 2.15
PARD6B-202ENST00000396039 LBX1P52954 281 aa28.47■■■□□ 2.15
PARD6B-202ENST00000396039 FMR1Q06787 632 aaKnown RBP eCLIP28.47■■■□□ 2.15
PARD6B-202ENST00000396039 GPR101Q96P66 508 aaPredicted RBP28.47■■■□□ 2.15
PARD6B-202ENST00000396039 DBNDD1Q9H9R9 158 aa28.47■■■□□ 2.15
PARD6B-202ENST00000396039 POLLQ9UGP5 575 aa28.47■■■□□ 2.15
PARD6B-202ENST00000396039 PSMD14O00487 310 aa28.46■■■□□ 2.15
PARD6B-202ENST00000396039 MAP2K2P36507 400 aa28.46■■■□□ 2.15
PARD6B-202ENST00000396039 SAPCD2Q86UD0 394 aa28.46■■■□□ 2.15
PARD6B-202ENST00000396039 TRPM4Q8TD43 1214 aa28.46■■■□□ 2.15
PARD6B-202ENST00000396039 METTL22Q9BUU2 404 aaPredicted RBP28.46■■■□□ 2.15
PARD6B-202ENST00000396039 GLIS2Q9BZE0 524 aaPredicted RBP28.46■■■□□ 2.15
PARD6B-202ENST00000396039 PSME4Q14997 1843 aa28.46■■■□□ 2.15
PARD6B-202ENST00000396039 COL4A1P02462 1669 aa28.45■■■□□ 2.15
PARD6B-202ENST00000396039 RIMBP2O15034 1052 aa28.45■■■□□ 2.14
PARD6B-202ENST00000396039 ECE2O60344 883 aa28.45■■■□□ 2.14
PARD6B-202ENST00000396039 HSPA8P11142 646 aaKnown RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms