RNA–Protein interactions for RNA: ENST00000395285.3

ARFGAP1-204, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-204ENST00000395285 ERICH4A6NGS2 130 aa19.72■□□□□ 0.75
ARFGAP1-204ENST00000395285 HSP90AB4PQ58FF6 505 aa19.72■□□□□ 0.75
ARFGAP1-204ENST00000395285 IFNL2Q8IZJ0 200 aa19.72■□□□□ 0.75
ARFGAP1-204ENST00000395285 KCNG1Q9UIX4 513 aa19.72■□□□□ 0.75
ARFGAP1-204ENST00000395285 SIL1Q9H173 461 aa19.72■□□□□ 0.75
ARFGAP1-204ENST00000395285 SOS2Q07890 1332 aaPredicted RBP19.72■□□□□ 0.75
ARFGAP1-204ENST00000395285 SIPA1L3O60292 1781 aaPredicted RBP19.72■□□□□ 0.75
ARFGAP1-204ENST00000395285 COL9A3Q14050 684 aaPredicted RBP19.71■□□□□ 0.75
ARFGAP1-204ENST00000395285 SLC52A2Q9HAB3 445 aa19.71■□□□□ 0.75
ARFGAP1-204ENST00000395285 ECHDC1Q9NTX5 307 aa19.71■□□□□ 0.75
ARFGAP1-204ENST00000395285 CCDC8Q9H0W5 538 aaPredicted RBP19.71■□□□□ 0.75
ARFGAP1-204ENST00000395285 HYPKQ9NX55 129 aa19.71■□□□□ 0.75
ARFGAP1-204ENST00000395285 TERF2Q15554 542 aa19.7■□□□□ 0.74
ARFGAP1-204ENST00000395285 NECAB1Q8N987 351 aa19.7■□□□□ 0.74
ARFGAP1-204ENST00000395285 KDM6AO15550 1401 aaPredicted RBP19.7■□□□□ 0.74
ARFGAP1-204ENST00000395285 MYCNP04198 464 aaPredicted RBP19.7■□□□□ 0.74
ARFGAP1-204ENST00000395285 FAM227BQ96M60 508 aa19.7■□□□□ 0.74
ARFGAP1-204ENST00000395285 PDRG1Q9NUG6 133 aa19.7■□□□□ 0.74
ARFGAP1-204ENST00000395285 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.7■□□□□ 0.74
ARFGAP1-204ENST00000395285 GJB2P29033 226 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 ZNF790Q6PG37 636 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 SAMD1Q6SPF0 538 aaPredicted RBP19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 KLHDC4Q8TBB5 520 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 TSPYL1Q9H0U9 437 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 TTC41PQ6P2S7 1318 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 RIOK3O14730 519 aaKnown RBP19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 EPB41L2O43491 1005 aaKnown RBP19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 PSEN1P49768 467 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 CLGNO14967 610 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 F13A1P00488 732 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 KSR2Q6VAB6 950 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 SUCLG2Q96I99 432 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 DCAF5Q96JK2 942 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 TCEANC2Q96MN5 208 aa19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 TLR7Q9NYK1 1049 aaKnown RBP19.69■□□□□ 0.74
ARFGAP1-204ENST00000395285 DNM1Q05193 864 aaKnown RBP19.68■□□□□ 0.74
ARFGAP1-204ENST00000395285 RUFY2Q8WXA3 655 aa19.68■□□□□ 0.74
ARFGAP1-204ENST00000395285 BICC1Q9H694 974 aaKnown RBP19.68■□□□□ 0.74
ARFGAP1-204ENST00000395285 USP25Q9UHP3 1055 aa19.68■□□□□ 0.74
ARFGAP1-204ENST00000395285 VPS37CA5D8V6 355 aaPredicted RBP19.68■□□□□ 0.74
ARFGAP1-204ENST00000395285 PHF14O94880 888 aa19.68■□□□□ 0.74
ARFGAP1-204ENST00000395285 HCLS1P14317 486 aaPredicted RBP19.68■□□□□ 0.74
ARFGAP1-204ENST00000395285 NFATC2IPQ8NCF5 419 aa19.68■□□□□ 0.74
ARFGAP1-204ENST00000395285 BCCIPQ9P287 314 aaKnown RBP eCLIP19.68■□□□□ 0.74
ARFGAP1-204ENST00000395285 TNNT3P45378 269 aaPredicted RBP19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 PRDM11Q9NQV5 511 aa19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 SASH1O94885 1247 aa19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 PLCB2Q00722 1185 aa19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 SLC39A6Q13433 755 aa19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 EAF2Q96CJ1 260 aaPredicted RBP19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 GPATCH3Q96I76 525 aa19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 KAZALD1Q96I82 304 aa19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 GEMIN8Q9NWZ8 242 aaKnown RBP19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 CYP46A1Q9Y6A2 500 aa19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 SCN11AQ9UI33 1791 aa19.67■□□□□ 0.74
ARFGAP1-204ENST00000395285 USP42Q9H9J4 1324 aaKnown RBP19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 CYP27B1O15528 508 aa19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 CHAF1AQ13111 956 aaPredicted RBP19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 CNPY4Q8N129 248 aa19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 BOLA2Q9H3K6 86 aa19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 MYL6BP14649 208 aa19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 NMIQ13287 307 aaPredicted RBP19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 MTX1Q13505 466 aa19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 ME3Q16798 604 aa19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 CCDC183Q5T5S1 534 aa19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 YY1AP1Q9H869 796 aa19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 DDX21Q9NR30 783 aaKnown RBP eCLIP19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 CHMP3Q9Y3E7 222 aa19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 RBM8AQ9Y5S9 174 aaKnown RBP19.66■□□□□ 0.74
ARFGAP1-204ENST00000395285 GIMAP6Q6P9H5 292 aa19.65■□□□□ 0.74
ARFGAP1-204ENST00000395285 TTC12Q9H892 705 aaPredicted RBP19.65■□□□□ 0.74
ARFGAP1-204ENST00000395285 CTNNA3Q9UI47 895 aa19.65■□□□□ 0.74
ARFGAP1-204ENST00000395285 WDR17Q8IZU2 1322 aa19.65■□□□□ 0.74
ARFGAP1-204ENST00000395285 GRM8O00222 908 aa19.65■□□□□ 0.74
ARFGAP1-204ENST00000395285 ST3GAL1Q11201 340 aa19.65■□□□□ 0.74
ARFGAP1-204ENST00000395285 EVI5LQ96CN4 794 aa19.65■□□□□ 0.74
ARFGAP1-204ENST00000395285 FEZ2Q9UHY8 353 aaPredicted RBP19.65■□□□□ 0.74
ARFGAP1-204ENST00000395285 ALDH1L1O75891 902 aa19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 PIP4K2AP48426 406 aaPredicted RBP19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 UBE2HP62256 183 aa19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 G3BP1Q13283 466 aaKnown RBP eCLIP19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 TAF6LQ9Y6J9 622 aa19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 CCDC171Q6TFL3 1326 aa19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 VPS53Q5VIR6 699 aa19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 FERMT3Q86UX7 667 aa19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 ZSWIM6Q9HCJ5 1215 aa19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 MTMR6Q9Y217 621 aa19.64■□□□□ 0.73
ARFGAP1-204ENST00000395285 PKD1L3Q7Z443 1732 aa19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 LOC102724159A0A0B4J2E5 919 aa19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 NECTIN1Q15223 517 aa19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 PWP2Q15269 919 aaKnown RBP19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 CREB3L3Q68CJ9 461 aa19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 FAM173BQ6P4H8 233 aa19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 TMEM87AQ8NBN3 555 aa19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 EDC3Q96F86 508 aaKnown RBP19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 DDX41Q9UJV9 622 aaKnown RBP19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 TPCN1Q9ULQ1 816 aa19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 MRC1P22897 1456 aa19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 DDX58O95786 925 aaKnown RBP19.63■□□□□ 0.73
ARFGAP1-204ENST00000395285 ZKSCAN1P17029 563 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms