RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 PLEKHM2Q8IWE5 1019 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 DNAJC10Q8IXB1 793 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.68□□□□□ -1.342e-8■■■■■ 28.1
RFFL-202ENST00000394597 ITSN1Q15811 1721 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 H3BQV1 296 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 POLR3GO15318 223 aaPredicted RBP6.68□□□□□ -1.34
RFFL-202ENST00000394597 IFFO2Q5TF58 517 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 LRSAM1Q6UWE0 723 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 USP44Q9H0E7 712 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 PA2G4Q9UQ80 394 aaKnown RBP6.68□□□□□ -1.34
RFFL-202ENST00000394597 NBPF7P0C2Y1 421 aaPredicted RBP6.68□□□□□ -1.34
RFFL-202ENST00000394597 TSHZ3Q63HK5 1081 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 CCDC191Q8NCU4 936 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 RBSNQ9H1K0 784 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 BICC1Q9H694 974 aaKnown RBP6.68□□□□□ -1.34
RFFL-202ENST00000394597 CYP46A1Q9Y6A2 500 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 ADCY5O95622 1261 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 BRD2P25440 801 aaKnown RBP6.68□□□□□ -1.34
RFFL-202ENST00000394597 RFC4P35249 363 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 IL15P40933 162 aaPredicted RBP6.68□□□□□ -1.34
RFFL-202ENST00000394597 RAB3GAP1Q15042 981 aa6.68□□□□□ -1.34
RFFL-202ENST00000394597 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.68□□□□□ -1.34
RFFL-202ENST00000394597 GCKRQ14397 625 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 BEND3Q5T5X7 828 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 ZFP91Q96JP5 570 aaPredicted RBP6.67□□□□□ -1.34
RFFL-202ENST00000394597 NCAPD2Q15021 1401 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 KDRP35968 1356 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 CYP27B1O15528 508 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 CDC5LQ99459 802 aaKnown RBP6.67□□□□□ -1.34
RFFL-202ENST00000394597 UTP14AQ9BVJ6 771 aaKnown RBP6.67□□□□□ -1.34
RFFL-202ENST00000394597 BCL2L12Q9HB09 334 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 PNMA6EA0A0J9YXQ4 647 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 CPLX1O14810 134 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 CLGNO14967 610 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 SLC5A1P13866 664 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 SKIDA1Q1XH10 827 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 CCDC152Q4G0S7 254 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 HSP90B2PQ58FF3 399 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 FBXW7Q969H0 707 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 RASSF4Q9H2L5 321 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 CTNNA3Q9UI47 895 aa6.67□□□□□ -1.34
RFFL-202ENST00000394597 NIP7Q9Y221 180 aaKnown RBP eCLIP6.67□□□□□ -1.34
RFFL-202ENST00000394597 DCCP43146 1447 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 ERICH2A1L162 156 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 ZBTB22O15209 634 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 C10orf67Q8IYJ2 551 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 TTC41PQ6P2S7 1318 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.66□□□□□ -1.34
RFFL-202ENST00000394597 NEURL1BA8MQ27 555 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 KRT32Q14532 448 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 ANKRD1Q15327 319 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 NFXL1Q6ZNB6 911 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 SUCLG2Q96I99 432 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 SETDB2Q96T68 719 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 TMX1Q9H3N1 280 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 ANTXR1Q9H6X2 564 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 MYOM1P52179 1685 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 H0YHG0 523 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 IRS4O14654 1257 aaPredicted RBP6.66□□□□□ -1.34
RFFL-202ENST00000394597 AKAP17AQ02040 695 aaKnown RBP6.66□□□□□ -1.34
RFFL-202ENST00000394597 CAVIN4Q5BKX8 364 aa6.66□□□□□ -1.34
RFFL-202ENST00000394597 THRAP3Q9Y2W1 955 aaKnown RBP6.66□□□□□ -1.34
RFFL-202ENST00000394597 RTCBQ9Y3I0 505 aaKnown RBP6.66□□□□□ -1.34
RFFL-202ENST00000394597 FIBPO43427 364 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 IDH1O75874 414 aaKnown RBP6.65□□□□□ -1.34
RFFL-202ENST00000394597 RDXP35241 583 aaKnown RBP6.65□□□□□ -1.34
RFFL-202ENST00000394597 BMS1Q14692 1282 aaKnown RBP6.65□□□□□ -1.34
RFFL-202ENST00000394597 PROSER3Q2NL68 480 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 CTR9Q6PD62 1173 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 BLOC1S2Q6QNY1 142 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 NBPF5PQ86XG9 351 aaPredicted RBP6.65□□□□□ -1.34
RFFL-202ENST00000394597 NACAP1Q9BZK3 213 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 CCDC87Q9NVE4 849 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 LRP2BPQ9P2M1 347 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 SOS2Q07890 1332 aaPredicted RBP6.65□□□□□ -1.34
RFFL-202ENST00000394597 PRAMEF22A3QJZ6 481 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 TCIRG1Q13488 830 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 TMCO3Q6UWJ1 677 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 SSH3Q8TE77 659 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 JAKMIP1Q96N16 626 aaKnown RBP6.65□□□□□ -1.34
RFFL-202ENST00000394597 PDRG1Q9NUG6 133 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 ASAP1Q9ULH1 1129 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 MAP2P11137 1827 aaKnown RBP6.65□□□□□ -1.34
RFFL-202ENST00000394597 KIF20BQ96Q89 1820 aa6.65□□□□□ -1.34
RFFL-202ENST00000394597 IQSEC2Q5JU85 1478 aa6.65□□□□□ -1.35
RFFL-202ENST00000394597 RIOK3O14730 519 aaKnown RBP6.65□□□□□ -1.35
RFFL-202ENST00000394597 ZSCAN20P17040 1043 aaPredicted RBP6.65□□□□□ -1.35
RFFL-202ENST00000394597 FAM89AQ96GI7 184 aa6.65□□□□□ -1.35
RFFL-202ENST00000394597 CRB1P82279 1406 aa6.65□□□□□ -1.35
RFFL-202ENST00000394597 GOLIM4O00461 696 aa6.65□□□□□ -1.35
RFFL-202ENST00000394597 CCDC192P0DO97 292 aa6.65□□□□□ -1.35
RFFL-202ENST00000394597 PTPN14Q15678 1187 aa6.65□□□□□ -1.35
RFFL-202ENST00000394597 PARP10Q53GL7 1025 aa6.65□□□□□ -1.35
RFFL-202ENST00000394597 PRPF40BQ6NWY9 871 aaKnown RBP6.65□□□□□ -1.35
RFFL-202ENST00000394597 DDX46Q7L014 1031 aaKnown RBP6.65□□□□□ -1.35
RFFL-202ENST00000394597 DHX37Q8IY37 1157 aaKnown RBP6.65□□□□□ -1.35
RFFL-202ENST00000394597 C17orf53Q8N3J3 647 aaPredicted RBP6.65□□□□□ -1.35
RFFL-202ENST00000394597 NLRP3Q96P20 1036 aa6.65□□□□□ -1.35
RFFL-202ENST00000394597 RSPH14Q9UHP6 348 aa6.65□□□□□ -1.35
RFFL-202ENST00000394597 MST1RQ04912 1400 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms