RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 SF3A1Q15459 793 aaKnown RBP12.48□□□□□ -0.41
ACTN1-203ENST00000394419 LUZP1Q86V48 1076 aa12.48□□□□□ -0.41
ACTN1-203ENST00000394419 REREQ9P2R6 1566 aa12.48□□□□□ -0.41
ACTN1-203ENST00000394419 GOLGA6L19H0YKK7 550 aa12.48□□□□□ -0.41
ACTN1-203ENST00000394419 LIG1P18858 919 aa12.48□□□□□ -0.41
ACTN1-203ENST00000394419 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
ACTN1-203ENST00000394419 BECN2A8MW95 431 aa12.47□□□□□ -0.41
ACTN1-203ENST00000394419 HAND2P61296 217 aa12.47□□□□□ -0.41
ACTN1-203ENST00000394419 TTC6Q86TZ1 520 aa12.47□□□□□ -0.41
ACTN1-203ENST00000394419 IFNL2Q8IZJ0 200 aa12.47□□□□□ -0.41
ACTN1-203ENST00000394419 DIP2AQ14689 1571 aa12.47□□□□□ -0.41
ACTN1-203ENST00000394419 SNRPA1P09661 255 aaKnown RBP12.47□□□□□ -0.41
ACTN1-203ENST00000394419 NOLC1Q14978 699 aaKnown RBP eCLIP12.47□□□□□ -0.418e-10■□□□□ 9.7
ACTN1-203ENST00000394419 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
ACTN1-203ENST00000394419 RPAP1Q9BWH6 1393 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-203ENST00000394419 HSP90AB3PQ58FF7 597 aa12.47□□□□□ -0.41
ACTN1-203ENST00000394419 TOM1L2Q6ZVM7 507 aa12.47□□□□□ -0.41
ACTN1-203ENST00000394419 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
ACTN1-203ENST00000394419 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
ACTN1-203ENST00000394419 ZNF594Q96JF6 807 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-203ENST00000394419 RPS6KB1P23443 525 aa12.46□□□□□ -0.41
ACTN1-203ENST00000394419 SLC52A2Q9HAB3 445 aa12.46□□□□□ -0.41
ACTN1-203ENST00000394419 DBNLQ9UJU6 430 aaKnown RBP12.46□□□□□ -0.41
ACTN1-203ENST00000394419 APPP05067 770 aa12.46□□□□□ -0.42
ACTN1-203ENST00000394419 ME1P48163 572 aa12.46□□□□□ -0.42
ACTN1-203ENST00000394419 ANO6Q4KMQ2 910 aa12.46□□□□□ -0.42
ACTN1-203ENST00000394419 TNNI3KQ59H18 835 aa12.46□□□□□ -0.42
ACTN1-203ENST00000394419 FPGT-TNNI3KV9GXZ4 949 aa12.46□□□□□ -0.42
ACTN1-203ENST00000394419 ZNF500O60304 480 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-203ENST00000394419 KAZALD1Q96I82 304 aa12.45□□□□□ -0.42
ACTN1-203ENST00000394419 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-203ENST00000394419 SCAND2PQ9GZW5 306 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-203ENST00000394419 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
ACTN1-203ENST00000394419 MCM5P33992 734 aa12.45□□□□□ -0.42
ACTN1-203ENST00000394419 APOBRQ0VD83 1088 aa12.45□□□□□ -0.42
ACTN1-203ENST00000394419 NCOA5Q9HCD5 579 aaKnown RBP12.45□□□□□ -0.42
ACTN1-203ENST00000394419 TYRO3Q06418 890 aa12.45□□□□□ -0.42
ACTN1-203ENST00000394419 KRT32Q14532 448 aa12.45□□□□□ -0.42
ACTN1-203ENST00000394419 UVSSAQ2YD98 709 aa12.45□□□□□ -0.42
ACTN1-203ENST00000394419 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
ACTN1-203ENST00000394419 IFIT1P09914 478 aaKnown RBP12.44□□□□□ -0.42
ACTN1-203ENST00000394419 GNL2Q13823 731 aaKnown RBP12.44□□□□□ -0.42
ACTN1-203ENST00000394419 SDF4Q9BRK5 362 aa12.44□□□□□ -0.42
ACTN1-203ENST00000394419 TM6SF1Q9BZW5 370 aa12.44□□□□□ -0.42
ACTN1-203ENST00000394419 DNAJC25Q9H1X3 360 aa12.44□□□□□ -0.42
ACTN1-203ENST00000394419 A1BGP04217 495 aa12.44□□□□□ -0.42
ACTN1-203ENST00000394419 CCDC73Q6ZRK6 1079 aa12.44□□□□□ -0.42
ACTN1-203ENST00000394419 ERCC4Q92889 916 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-203ENST00000394419 SYTL4Q96C24 671 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-203ENST00000394419 PDCL3Q9H2J4 239 aa12.44□□□□□ -0.42
ACTN1-203ENST00000394419 NPHP3Q7Z494 1330 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 A0A087WWV3 80 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 CPLX1O14810 134 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 EVA1CP58658 441 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 MCMDC2Q4G0Z9 681 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 STK11IPQ8N1F8 1099 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 PRDM11Q9NQV5 511 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 RGPD8O14715 1765 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-203ENST00000394419 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 TCHHQ07283 1943 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 TAF5LO75529 589 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 PTGS1P23219 599 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 ZNF165P49910 485 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 MTX1Q13505 466 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 FILIP1Q7Z7B0 1213 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
ACTN1-203ENST00000394419 CCDC186Q7Z3E2 898 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 TOMM22Q9NS69 142 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 KIF3AQ9Y496 699 aa12.43□□□□□ -0.42
ACTN1-203ENST00000394419 U3KPZ7 1027 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-203ENST00000394419 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
ACTN1-203ENST00000394419 PHKG2P15735 406 aa12.42□□□□□ -0.42
ACTN1-203ENST00000394419 CEP126Q9P2H0 1117 aa12.42□□□□□ -0.42
ACTN1-203ENST00000394419 KINO60870 393 aaKnown RBP12.42□□□□□ -0.42
ACTN1-203ENST00000394419 FTOQ9C0B1 505 aaKnown RBP eCLIP12.42□□□□□ -0.42
ACTN1-203ENST00000394419 NR1I2O75469 434 aa12.42□□□□□ -0.42
ACTN1-203ENST00000394419 CCDC57Q2TAC2 916 aa12.42□□□□□ -0.42
ACTN1-203ENST00000394419 TTLL7Q6ZT98 887 aa12.42□□□□□ -0.42
ACTN1-203ENST00000394419 FAM200AQ8TCP9 573 aa12.42□□□□□ -0.42
ACTN1-203ENST00000394419 LEO1Q8WVC0 666 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-203ENST00000394419 C16orf45Q96MC5 204 aaPredicted RBP12.42□□□□□ -0.42
ACTN1-203ENST00000394419 PRDM10Q9NQV6 1147 aa12.42□□□□□ -0.42
ACTN1-203ENST00000394419 HMG20BQ9P0W2 317 aa12.42□□□□□ -0.42
ACTN1-203ENST00000394419 POLR3DP05423 398 aaPredicted RBP12.41□□□□□ -0.42
ACTN1-203ENST00000394419 CYP21A2P08686 494 aa12.41□□□□□ -0.42
ACTN1-203ENST00000394419 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
ACTN1-203ENST00000394419 TTC39AQ5SRH9 613 aa12.41□□□□□ -0.42
ACTN1-203ENST00000394419 OTUD7BQ6GQQ9 843 aa12.41□□□□□ -0.42
ACTN1-203ENST00000394419 ANKARQ7Z5J8 1434 aa12.41□□□□□ -0.42
ACTN1-203ENST00000394419 ERBB3P21860 1342 aa12.41□□□□□ -0.42
ACTN1-203ENST00000394419 UBR1Q8IWV7 1749 aa12.41□□□□□ -0.42
ACTN1-203ENST00000394419 GPTP24298 496 aa12.41□□□□□ -0.42
ACTN1-203ENST00000394419 PAG1Q9NWQ8 432 aa12.41□□□□□ -0.42
ACTN1-203ENST00000394419 CFAP45Q9UL16 551 aa12.41□□□□□ -0.42
ACTN1-203ENST00000394419 RALYLQ86SE5 291 aaKnown RBP12.41□□□□□ -0.42
ACTN1-203ENST00000394419 TOB2Q14106 344 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-203ENST00000394419 PDIA6Q15084 440 aa12.4□□□□□ -0.42
ACTN1-203ENST00000394419 TTLL5Q6EMB2 1281 aa12.4□□□□□ -0.42
ACTN1-203ENST00000394419 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
ACTN1-203ENST00000394419 ST3GAL1Q11201 340 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms