RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 CYP7A1P22680 504 aa16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 WTAPQ15007 396 aa16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 ZNF622Q969S3 477 aaKnown RBP eCLIP16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 ABCA8O94911 1581 aa16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 PARP10Q53GL7 1025 aa16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 HDAC9Q9UKV0 1011 aa16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 CCT2P78371 535 aaKnown RBP16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 HSPA2P54652 639 aa16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 TNPO1Q92973 898 aaKnown RBP16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
PPARGC1B-203ENST00000394320 SFPQP23246 707 aaKnown RBP eCLIP16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 FILIP1Q7Z7B0 1213 aa16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 CNNM3Q8NE01 707 aa16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 NAA16Q6N069 864 aaPredicted RBP16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 CALML4Q96GE6 196 aa16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 ACSBG1Q96GR2 724 aa16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 FEZ1Q99689 392 aa16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 PTPRTO14522 1441 aa16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■■□ 25
PPARGC1B-203ENST00000394320 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 RBM8AQ9Y5S9 174 aaKnown RBP16.69■□□□□ 0.26
PPARGC1B-203ENST00000394320 ZBTB43O43298 467 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 SSFA2P28290 1259 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 MICU3Q86XE3 530 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 PAG1Q9NWQ8 432 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 IRS4O14654 1257 aaPredicted RBP16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 RBM25P49756 843 aaKnown RBP16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 TSPYL6Q8N831 410 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 ZSCAN12O43309 604 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 NEMFO60524 1076 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 PLBD2Q8NHP8 589 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 SNX21Q969T3 373 aa16.68■□□□□ 0.26
PPARGC1B-203ENST00000394320 CHL1O00533 1208 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 UBE2HP62256 183 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 ARHGAP29Q52LW3 1261 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 VPS36Q86VN1 386 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 CALM1P0DP23 149 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 CALM2P0DP24 149 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 CALM3P0DP25 149 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 HAND2P61296 217 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 ZNF790Q6PG37 636 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 STXBP4Q6ZWJ1 553 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 CCDC82Q8N4S0 544 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 GUCY1B3Q02153 619 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 BRF1Q92994 677 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 SLC4A4Q9Y6R1 1079 aa16.67■□□□□ 0.26
PPARGC1B-203ENST00000394320 KLF18A0A0U1RQI7 1052 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 SLC9C2Q5TAH2 1124 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 CETN2P41208 172 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 JARID2Q92833 1246 aaPredicted RBP16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 TMX3Q96JJ7 454 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 MBD5Q9P267 1494 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 RNF113AO15541 343 aaKnown RBP16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 TAF4BQ92750 862 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 EYA3Q99504 573 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 UBA7P41226 1012 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 CAMK4Q16566 473 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 BTG4Q9NY30 223 aa16.66■□□□□ 0.26
PPARGC1B-203ENST00000394320 MATR3P43243 847 aaKnown RBP eCLIP16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 TSHZ3Q63HK5 1081 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 KIAA1328Q86T90 577 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 SLC26A6Q9BXS9 759 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 ESPNB1AK53 854 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 STX1AQ16623 288 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 ZSCAN30Q86W11 494 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 CCDC191Q8NCU4 936 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 MPHOSPH6Q99547 160 aaKnown RBP16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 OGFOD1Q8N543 542 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 SPA17Q15506 151 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 CCDC102BQ68D86 513 aa16.65■□□□□ 0.26
PPARGC1B-203ENST00000394320 ZSCAN22P10073 491 aaPredicted RBP16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 AOX1Q06278 1338 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 GOLGA6L10A6NI86 522 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 TSPY3P0CV98 308 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 TSPY8P0CW00 308 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 RTN1Q16799 776 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 KCNG4Q8TDN1 519 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 METTL22Q9BUU2 404 aaPredicted RBP16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 IFIT1BQ5T764 474 aaKnown RBP16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 JAKMIP3Q5VZ66 844 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 SKAP1Q86WV1 359 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 FAM114A1Q8IWE2 563 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 ZC3H12CQ9C0D7 883 aaKnown RBP16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 RTL9Q8NET4 1388 aa16.64■□□□□ 0.25
PPARGC1B-203ENST00000394320 KLHL40Q2TBA0 621 aa16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 EIF3JO75822 258 aaKnown RBP16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 TOP1P11387 765 aaKnown RBP16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 GSDMDP57764 484 aa16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 CETN1Q12798 172 aa16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 KDM5DQ9BY66 1539 aa16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 ZNF219Q9P2Y4 722 aaPredicted RBP16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 KIAA0232Q92628 1395 aa16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 CWF19L2Q2TBE0 894 aaKnown RBP16.63■□□□□ 0.25
PPARGC1B-203ENST00000394320 ZMYM4Q5VZL5 1548 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 MAGEB6P1A0A0J9YX57 407 aa16.62■□□□□ 0.25
PPARGC1B-203ENST00000394320 CWC15Q9P013 229 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms