RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 IPO7O95373 1038 aaKnown RBP12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 SLC4A8Q2Y0W8 1093 aa12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 MFSD6Q6ZSS7 791 aa12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 DBNDD2Q9BQY9 259 aa12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 NYXQ9GZU5 481 aa12.48□□□□□ -0.41
MTHFD2-201ENST00000394053 A0A1B0GUL7 405 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 CCDC144CPQ8IYA2 1237 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 CDK5RAP3Q96JB5 506 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 TFIP11Q9UBB9 837 aaKnown RBP12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 USP21Q9UK80 565 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 GLI2P10070 1586 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 STX6O43752 255 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 BAG3O95817 575 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 TMEM67Q5HYA8 995 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 SCAND2PQ9GZW5 306 aaPredicted RBP12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 NUP62CLQ9H1M0 184 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 ADGRB3O60242 1522 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 ITGA6P23229 1130 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 LMTK2Q8IWU2 1503 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 GOLGA8AA7E2F4 631 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 NEURL1BA8MQ27 555 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 ZNF853P0CG23 659 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 CARD10Q9BWT7 1032 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 GRPEL1Q9HAV7 217 aa12.47□□□□□ -0.41
MTHFD2-201ENST00000394053 DIP2CQ9Y2E4 1556 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 SYCE3A1L190 88 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 MCM5P33992 734 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 TRAPPC3LQ5T215 181 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 SPTY2D1Q68D10 685 aaPredicted RBP12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 MPNDQ8N594 471 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 BRPF3Q9ULD4 1205 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 TTLL7Q6ZT98 887 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 BRINP3Q76B58 766 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 HOMER1Q86YM7 354 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 USP26Q9BXU7 913 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 FAM13BQ9NYF5 915 aa12.46□□□□□ -0.41
MTHFD2-201ENST00000394053 TNNI3KQ59H18 835 aa12.46□□□□□ -0.42
MTHFD2-201ENST00000394053 FPGT-TNNI3KV9GXZ4 949 aa12.46□□□□□ -0.42
MTHFD2-201ENST00000394053 RIMBP3CA6NJZ7 1639 aa12.46□□□□□ -0.42
MTHFD2-201ENST00000394053 RIMBP3BA6NNM3 1639 aa12.46□□□□□ -0.42
MTHFD2-201ENST00000394053 MADDQ8WXG6 1647 aa12.46□□□□□ -0.42
MTHFD2-201ENST00000394053 RIMBP3Q9UFD9 1639 aa12.46□□□□□ -0.42
MTHFD2-201ENST00000394053 TSPY2A6NKD2 308 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 PROSER3Q2NL68 480 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 ORC3Q9UBD5 711 aaPredicted RBP12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 RTL1A6NKG5 1358 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 CAMK4Q16566 473 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 BEND3Q5T5X7 828 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 CCAR2Q8N163 923 aaKnown RBP12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 CDK12Q9NYV4 1490 aaPredicted RBP12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 WDR17Q8IZU2 1322 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 KIF24Q5T7B8 1368 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 INO80Q9ULG1 1556 aaPredicted RBP12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 SMC2O95347 1197 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 BAG4O95429 457 aaKnown RBP12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 IARSP41252 1262 aaKnown RBP12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 ASAP1Q9ULH1 1129 aa12.45□□□□□ -0.42
MTHFD2-201ENST00000394053 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 RNF113AO15541 343 aaKnown RBP12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 PDE8AO60658 829 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 TCIRG1Q13488 830 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 CATIPQ7Z7H3 387 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 PDILTQ8N807 584 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 PPRC1Q5VV67 1664 aaKnown RBP12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 KLF18A0A0U1RQI7 1052 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 SNX21Q969T3 373 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 FAM43AQ8N2R8 423 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 SSH3Q8TE77 659 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 CRNKL1Q9BZJ0 848 aaKnown RBP12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 AXIN2Q9Y2T1 843 aa12.44□□□□□ -0.42
MTHFD2-201ENST00000394053 PDE4BQ07343 736 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 ANKARQ7Z5J8 1434 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 ABCA6Q8N139 1617 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 CREB3L3Q68CJ9 461 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 SPC24Q8NBT2 197 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 STX8Q9UNK0 236 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 NDUFB9Q9Y6M9 179 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 CHST3Q7LGC8 479 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 F8W031 263 aaPredicted RBP12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 SSRP1Q08945 709 aaKnown RBP12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 MIGA1Q8NAN2 632 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 ZC3H12CQ9C0D7 883 aaKnown RBP12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 CCDC39Q9UFE4 941 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 JAG2Q9Y219 1238 aa12.43□□□□□ -0.42
MTHFD2-201ENST00000394053 KIDINS220Q9ULH0 1771 aa12.42□□□□□ -0.42
MTHFD2-201ENST00000394053 KRT18P05783 430 aaKnown RBP12.42□□□□□ -0.42
MTHFD2-201ENST00000394053 BRPF1P55201 1214 aaPredicted RBP12.42□□□□□ -0.42
MTHFD2-201ENST00000394053 MAP3K11Q16584 847 aa12.42□□□□□ -0.42
MTHFD2-201ENST00000394053 Q6ZUG5 572 aa12.42□□□□□ -0.42
MTHFD2-201ENST00000394053 CEP89Q96ST8 783 aa12.42□□□□□ -0.42
MTHFD2-201ENST00000394053 SPATA31A3Q5VYP0 1347 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms