RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 CACNA1FO60840 1977 aa19.35■□□□□ 0.69
CNP-201ENST00000393888 HTATSF1O43719 755 aaKnown RBP19.34■□□□□ 0.69
CNP-201ENST00000393888 PPFIA3O75145 1194 aa19.34■□□□□ 0.69
CNP-201ENST00000393888 TMEM2Q9UHN6 1383 aa19.34■□□□□ 0.69
CNP-201ENST00000393888 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
CNP-201ENST00000393888 CRYBG1Q9Y4K1 1723 aa19.34■□□□□ 0.69
CNP-201ENST00000393888 PLEKHG3A1L390 1219 aa19.34■□□□□ 0.69
CNP-201ENST00000393888 GTF2E1P29083 439 aaPredicted RBP19.34■□□□□ 0.69
CNP-201ENST00000393888 ZNF589Q86UQ0 364 aaPredicted RBP19.34■□□□□ 0.69
CNP-201ENST00000393888 GPATCH3Q96I76 525 aa19.34■□□□□ 0.69
CNP-201ENST00000393888 RBM6P78332 1123 aaKnown RBP19.33■□□□□ 0.69
CNP-201ENST00000393888 NYAP1Q6ZVC0 841 aa19.33■□□□□ 0.69
CNP-201ENST00000393888 C9orf78Q9NZ63 289 aaPredicted RBP19.33■□□□□ 0.69
CNP-201ENST00000393888 H3BQV1 296 aa19.33■□□□□ 0.68
CNP-201ENST00000393888 IFFO2Q5TF58 517 aa19.33■□□□□ 0.68
CNP-201ENST00000393888 EDC3Q96F86 508 aaKnown RBP19.33■□□□□ 0.68
CNP-201ENST00000393888 FSD1Q9BTV5 496 aa19.33■□□□□ 0.68
CNP-201ENST00000393888 TMEM51Q9NW97 253 aa19.33■□□□□ 0.68
CNP-201ENST00000393888 BECN2A8MW95 431 aa19.32■□□□□ 0.68
CNP-201ENST00000393888 CCZ1BP86790 482 aa19.32■□□□□ 0.68
CNP-201ENST00000393888 CCZ1P86791 482 aaPredicted RBP19.32■□□□□ 0.68
CNP-201ENST00000393888 EAF2Q96CJ1 260 aaPredicted RBP19.32■□□□□ 0.68
CNP-201ENST00000393888 LRRC2Q9BYS8 371 aa19.32■□□□□ 0.68
CNP-201ENST00000393888 SIL1Q9H173 461 aa19.32■□□□□ 0.68
CNP-201ENST00000393888 N4BP2Q86UW6 1770 aaPredicted RBP19.32■□□□□ 0.68
CNP-201ENST00000393888 NALCNQ8IZF0 1738 aa19.32■□□□□ 0.68
CNP-201ENST00000393888 CDC25BP30305 580 aa19.32■□□□□ 0.68
CNP-201ENST00000393888 RESTQ13127 1097 aa19.32■□□□□ 0.68
CNP-201ENST00000393888 CWF19L2Q2TBE0 894 aaKnown RBP19.32■□□□□ 0.68
CNP-201ENST00000393888 LGR6Q9HBX8 967 aa19.32■□□□□ 0.68
CNP-201ENST00000393888 GOLPH3LQ9H4A5 285 aa19.31■□□□□ 0.68
CNP-201ENST00000393888 NPHP4O75161 1426 aaPredicted RBP19.31■□□□□ 0.68
CNP-201ENST00000393888 ERBB3P21860 1342 aa19.31■□□□□ 0.68
CNP-201ENST00000393888 HSP90B1P14625 803 aaKnown RBP19.31■□□□□ 0.68
CNP-201ENST00000393888 ANKRD1Q15327 319 aa19.31■□□□□ 0.68
CNP-201ENST00000393888 TAF3Q5VWG9 929 aa19.31■□□□□ 0.68
CNP-201ENST00000393888 CCAR1Q8IX12 1150 aaKnown RBP19.31■□□□□ 0.68
CNP-201ENST00000393888 THEMISQ8N1K5 641 aaPredicted RBP19.31■□□□□ 0.68
CNP-201ENST00000393888 LRRN4CLQ8ND94 238 aa19.31■□□□□ 0.68
CNP-201ENST00000393888 ZNF446Q9NWS9 450 aa19.31■□□□□ 0.68
CNP-201ENST00000393888 ADCY9O60503 1353 aa19.3■□□□□ 0.68
CNP-201ENST00000393888 CHGBP05060 677 aa19.3■□□□□ 0.68
CNP-201ENST00000393888 CCAR2Q8N163 923 aaKnown RBP19.3■□□□□ 0.68
CNP-201ENST00000393888 NGDNQ8NEJ9 315 aaKnown RBP19.3■□□□□ 0.68
CNP-201ENST00000393888 SASH1O94885 1247 aa19.3■□□□□ 0.68
CNP-201ENST00000393888 RNF20Q5VTR2 975 aa19.3■□□□□ 0.68
CNP-201ENST00000393888 MRFAP1L1Q96HT8 127 aa19.3■□□□□ 0.68
CNP-201ENST00000393888 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.29■□□□□ 0.68
CNP-201ENST00000393888 LRRC37A3O60309 1634 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 NLRP6P59044 892 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 EIF4A1P60842 406 aaKnown RBP19.29■□□□□ 0.68
CNP-201ENST00000393888 DHX40Q8IX18 779 aaKnown RBP19.29■□□□□ 0.68
CNP-201ENST00000393888 KLHDC4Q8TBB5 520 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 SIRT1Q96EB6 747 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 NDUFB9Q9Y6M9 179 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 VGLL3A8MV65 326 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 ERCC6LQ2NKX8 1250 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 SARM1Q6SZW1 724 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 ERO1AQ96HE7 468 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 MAP3K2Q9Y2U5 619 aa19.29■□□□□ 0.68
CNP-201ENST00000393888 SLU7O95391 586 aaKnown RBP19.28■□□□□ 0.68
CNP-201ENST00000393888 STX1AQ16623 288 aa19.28■□□□□ 0.68
CNP-201ENST00000393888 AEBP2Q6ZN18 517 aaPredicted RBP19.28■□□□□ 0.68
CNP-201ENST00000393888 AOPEPQ8N6M6 819 aa19.28■□□□□ 0.68
CNP-201ENST00000393888 GTF3C6Q969F1 213 aa19.28■□□□□ 0.68
CNP-201ENST00000393888 SLC26A8Q96RN1 970 aa19.28■□□□□ 0.68
CNP-201ENST00000393888 SETD1BQ9UPS6 1966 aaKnown RBP19.28■□□□□ 0.68
CNP-201ENST00000393888 CHD2O14647 1828 aaKnown RBP19.27■□□□□ 0.68
CNP-201ENST00000393888 HOXC9P31274 260 aa19.27■□□□□ 0.68
CNP-201ENST00000393888 HSPA2P54652 639 aa19.27■□□□□ 0.68
CNP-201ENST00000393888 Q6ZUG5 572 aa19.27■□□□□ 0.68
CNP-201ENST00000393888 TECPR2O15040 1411 aa19.27■□□□□ 0.67
CNP-201ENST00000393888 PDIA4P13667 645 aaKnown RBP19.27■□□□□ 0.67
CNP-201ENST00000393888 PROSER3Q2NL68 480 aa19.26■□□□□ 0.67
CNP-201ENST00000393888 CCDC129Q6ZRS4 1044 aa19.26■□□□□ 0.67
CNP-201ENST00000393888 NEMFO60524 1076 aa19.26■□□□□ 0.67
CNP-201ENST00000393888 GUCY1B3Q02153 619 aa19.26■□□□□ 0.67
CNP-201ENST00000393888 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
CNP-201ENST00000393888 TRERF1Q96PN7 1200 aa19.26■□□□□ 0.67
CNP-201ENST00000393888 FAM53CQ9NYF3 392 aa19.26■□□□□ 0.67
CNP-201ENST00000393888 CFAP45Q9UL16 551 aa19.26■□□□□ 0.67
CNP-201ENST00000393888 EID1Q9Y6B2 187 aa19.26■□□□□ 0.67
CNP-201ENST00000393888 ADD1P35611 737 aaKnown RBP19.25■□□□□ 0.67
CNP-201ENST00000393888 IRX5P78411 483 aaPredicted RBP19.25■□□□□ 0.67
CNP-201ENST00000393888 G3BP1Q13283 466 aaKnown RBP eCLIP19.25■□□□□ 0.672e-7■■□□□ 12
CNP-201ENST00000393888 SYT10Q6XYQ8 523 aa19.25■□□□□ 0.67
CNP-201ENST00000393888 ADGRL3Q9HAR2 1447 aa19.25■□□□□ 0.67
CNP-201ENST00000393888 HIP1O00291 1037 aa19.25■□□□□ 0.67
CNP-201ENST00000393888 MTX1Q13505 466 aa19.25■□□□□ 0.67
CNP-201ENST00000393888 SNW1Q13573 536 aaKnown RBP19.25■□□□□ 0.67
CNP-201ENST00000393888 GORABQ5T7V8 394 aa19.25■□□□□ 0.67
CNP-201ENST00000393888 ERC1Q8IUD2 1116 aa19.25■□□□□ 0.67
CNP-201ENST00000393888 SCRN1Q12765 414 aa19.24■□□□□ 0.67
CNP-201ENST00000393888 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
CNP-201ENST00000393888 USP28Q96RU2 1077 aa19.24■□□□□ 0.67
CNP-201ENST00000393888 PRAMEF22A3QJZ6 481 aa19.24■□□□□ 0.67
CNP-201ENST00000393888 TAF5LO75529 589 aa19.24■□□□□ 0.67
CNP-201ENST00000393888 CAVIN2O95810 425 aa19.24■□□□□ 0.67
CNP-201ENST00000393888 NBPF11Q86T75 865 aa19.24■□□□□ 0.67
CNP-201ENST00000393888 NEK1Q96PY6 1258 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms