RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 MRE11P49959 708 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 TSGA10IPQ3SY00 556 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 USPL1Q5W0Q7 1092 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 JAKMIP1Q96N16 626 aaKnown RBP10.87□□□□□ -0.67
TDP1-202ENST00000393452 FBXO3Q9UK99 471 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 CHMP3Q9Y3E7 222 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 DDX49Q9Y6V7 483 aaKnown RBP10.87□□□□□ -0.67
TDP1-202ENST00000393452 ZNF609O15014 1411 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 MAP3K15Q6ZN16 1313 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 SLC27A2O14975 620 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 PCCAP05165 728 aaPredicted RBP10.87□□□□□ -0.67
TDP1-202ENST00000393452 GIGYF2Q6Y7W6 1299 aaKnown RBP10.87□□□□□ -0.67
TDP1-202ENST00000393452 KIF6Q6ZMV9 814 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 ZNF589Q86UQ0 364 aaPredicted RBP10.87□□□□□ -0.67
TDP1-202ENST00000393452 SLC4A9Q96Q91 983 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 CYP46A1Q9Y6A2 500 aa10.87□□□□□ -0.67
TDP1-202ENST00000393452 ANKRD36CQ5JPF3 1778 aa10.86□□□□□ -0.67
TDP1-202ENST00000393452 SPEF2Q9C093 1822 aa10.86□□□□□ -0.67
TDP1-202ENST00000393452 EXOC5O00471 708 aa10.86□□□□□ -0.67
TDP1-202ENST00000393452 TAF5LO75529 589 aa10.86□□□□□ -0.67
TDP1-202ENST00000393452 CYP19A1P11511 503 aaPredicted RBP10.86□□□□□ -0.67
TDP1-202ENST00000393452 CPA1P15085 419 aa10.86□□□□□ -0.67
TDP1-202ENST00000393452 PDRG1Q9NUG6 133 aa10.86□□□□□ -0.67
TDP1-202ENST00000393452 PALLDQ8WX93 1383 aa10.86□□□□□ -0.67
TDP1-202ENST00000393452 TCHHQ07283 1943 aa10.86□□□□□ -0.67
TDP1-202ENST00000393452 CSF1RP07333 972 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 LRRC24Q50LG9 513 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 RNF20Q5VTR2 975 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 GAS2L3Q86XJ1 694 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 KBTBD3Q8NAB2 608 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 ZBTB38Q8NAP3 1195 aaPredicted RBP10.85□□□□□ -0.67
TDP1-202ENST00000393452 ZSCAN31Q96LW9 406 aaPredicted RBP10.85□□□□□ -0.67
TDP1-202ENST00000393452 SH2B1Q9NRF2 756 aaPredicted RBP10.85□□□□□ -0.67
TDP1-202ENST00000393452 HMG20BQ9P0W2 317 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 NRAPQ86VF7 1730 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 NUP98P52948 1817 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 PSMA5P28066 241 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 ZNF594Q96JF6 807 aaPredicted RBP10.85□□□□□ -0.67
TDP1-202ENST00000393452 CDCA7Q9BWT1 371 aaPredicted RBP10.85□□□□□ -0.67
TDP1-202ENST00000393452 ALDH8A1Q9H2A2 487 aaPredicted RBP10.85□□□□□ -0.67
TDP1-202ENST00000393452 GRPEL1Q9HAV7 217 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.85□□□□□ -0.67
TDP1-202ENST00000393452 MYH3P11055 1940 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 CDHR2Q9BYE9 1310 aa10.85□□□□□ -0.67
TDP1-202ENST00000393452 WDR33Q9C0J8 1336 aaKnown RBP10.85□□□□□ -0.67
TDP1-202ENST00000393452 DOT1LQ8TEK3 1739 aa10.84□□□□□ -0.67
TDP1-202ENST00000393452 LARGE1O95461 756 aa10.84□□□□□ -0.67
TDP1-202ENST00000393452 KCNJ4P48050 445 aa10.84□□□□□ -0.67
TDP1-202ENST00000393452 TIMM10P62072 90 aa10.84□□□□□ -0.67
TDP1-202ENST00000393452 NDUFB9Q9Y6M9 179 aa10.84□□□□□ -0.67
TDP1-202ENST00000393452 PRPF40AO75400 957 aaKnown RBP10.84□□□□□ -0.67
TDP1-202ENST00000393452 CCDC57Q2TAC2 916 aa10.84□□□□□ -0.67
TDP1-202ENST00000393452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.84□□□□□ -0.67
TDP1-202ENST00000393452 DNAJC2Q99543 621 aaKnown RBP10.84□□□□□ -0.67
TDP1-202ENST00000393452 PUS3Q9BZE2 481 aaKnown RBP10.84□□□□□ -0.67
TDP1-202ENST00000393452 ZNF330Q9Y3S2 320 aaPredicted RBP10.84□□□□□ -0.67
TDP1-202ENST00000393452 SH3TC1Q8TE82 1336 aa10.84□□□□□ -0.67
TDP1-202ENST00000393452 A0A1B0GUL7 405 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 ZNF445P59923 1031 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 MCMDC2Q4G0Z9 681 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 HSP90AB3PQ58FF7 597 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 GPT2Q8TD30 523 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 FAM89AQ96GI7 184 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 CHAMP1Q96JM3 812 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 NEUROD6Q96NK8 337 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 THRAP3Q9Y2W1 955 aaKnown RBP10.83□□□□□ -0.68
TDP1-202ENST00000393452 COL9A3Q14050 684 aaPredicted RBP10.83□□□□□ -0.68
TDP1-202ENST00000393452 HLFQ16534 295 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 DDX46Q7L014 1031 aaKnown RBP10.83□□□□□ -0.68
TDP1-202ENST00000393452 NLRP10Q86W26 655 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 LARP6Q9BRS8 491 aaKnown RBP10.83□□□□□ -0.68
TDP1-202ENST00000393452 PANK2Q9BZ23 570 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 PAG1Q9NWQ8 432 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 CEP126Q9P2H0 1117 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 ZBTB1Q9Y2K1 713 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 TAF6LQ9Y6J9 622 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 SPATA31A1Q5TZJ5 1347 aa10.83□□□□□ -0.68
TDP1-202ENST00000393452 ERVV-1B6SEH8 477 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 IL6STP40189 918 aaPredicted RBP10.82□□□□□ -0.68
TDP1-202ENST00000393452 ST3GAL1Q11201 340 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 ME3Q16798 604 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 FOXD4L5Q5VV16 416 aaPredicted RBP10.82□□□□□ -0.68
TDP1-202ENST00000393452 BLOC1S2Q6QNY1 142 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 FOXD4L4Q8WXT5 416 aaPredicted RBP10.82□□□□□ -0.68
TDP1-202ENST00000393452 PHLPP1O60346 1717 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 CHGBP05060 677 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 SYT1P21579 422 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 RPS6KB1P23443 525 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 PRIM1P49642 420 aaKnown RBP10.82□□□□□ -0.68
TDP1-202ENST00000393452 KRT32Q14532 448 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 CAVIN1Q6NZI2 390 aaKnown RBP10.82□□□□□ -0.68
TDP1-202ENST00000393452 HELLSQ9NRZ9 838 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 SMC3Q9UQE7 1217 aa10.82□□□□□ -0.68
TDP1-202ENST00000393452 U3KPZ7 1027 aaPredicted RBP10.82□□□□□ -0.68
TDP1-202ENST00000393452 CICQ96RK0 1608 aaPredicted RBP10.81□□□□□ -0.68
TDP1-202ENST00000393452 GOLIM4O00461 696 aa10.81□□□□□ -0.68
TDP1-202ENST00000393452 STX6O43752 255 aa10.81□□□□□ -0.68
TDP1-202ENST00000393452 IFIT5Q13325 482 aaKnown RBP10.81□□□□□ -0.68
TDP1-202ENST00000393452 ANKRD1Q15327 319 aa10.81□□□□□ -0.68
TDP1-202ENST00000393452 ZMYM1Q5SVZ6 1142 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms