RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 IRX5P78411 483 aaPredicted RBP22.96■■□□□ 1.27
CCDC50-202ENST00000392456 RHPN1Q8TCX5 695 aa22.95■■□□□ 1.26
CCDC50-202ENST00000392456 HDAC5Q9UQL6 1122 aa22.95■■□□□ 1.26
CCDC50-202ENST00000392456 FOXO4P98177 505 aa22.94■■□□□ 1.26
CCDC50-202ENST00000392456 BMP2KLQ5H9B9 411 aa22.94■■□□□ 1.26
CCDC50-202ENST00000392456 SASS6Q6UVJ0 657 aa22.94■■□□□ 1.26
CCDC50-202ENST00000392456 FAM89AQ96GI7 184 aa22.94■■□□□ 1.26
CCDC50-202ENST00000392456 BTAF1O14981 1849 aa22.94■■□□□ 1.26
CCDC50-202ENST00000392456 SIL1Q9H173 461 aa22.93■■□□□ 1.26
CCDC50-202ENST00000392456 SALL3Q9BXA9 1300 aa22.93■■□□□ 1.26
CCDC50-202ENST00000392456 RABL6Q3YEC7 729 aaPredicted RBP22.93■■□□□ 1.26
CCDC50-202ENST00000392456 LMBR1LQ6UX01 489 aa22.93■■□□□ 1.26
CCDC50-202ENST00000392456 TRIM28Q13263 835 aaKnown RBP22.92■■□□□ 1.26
CCDC50-202ENST00000392456 PDE1AP54750 535 aa22.92■■□□□ 1.26
CCDC50-202ENST00000392456 NUTM1Q86Y26 1132 aa22.92■■□□□ 1.26
CCDC50-202ENST00000392456 RAB11FIP3O75154 756 aa22.91■■□□□ 1.26
CCDC50-202ENST00000392456 RFX5P48382 616 aaPredicted RBP22.91■■□□□ 1.26
CCDC50-202ENST00000392456 NLRP10Q86W26 655 aa22.91■■□□□ 1.26
CCDC50-202ENST00000392456 HS1BP3Q53T59 392 aa22.91■■□□□ 1.26
CCDC50-202ENST00000392456 TTC22Q5TAA0 569 aa22.91■■□□□ 1.26
CCDC50-202ENST00000392456 DDX11L8A8MPP1 907 aa22.9■■□□□ 1.26
CCDC50-202ENST00000392456 OS9Q13438 667 aaPredicted RBP22.9■■□□□ 1.26
CCDC50-202ENST00000392456 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
CCDC50-202ENST00000392456 SASH1O94885 1247 aa22.9■■□□□ 1.26
CCDC50-202ENST00000392456 MMP14P50281 582 aa22.9■■□□□ 1.26
CCDC50-202ENST00000392456 KRT27Q7Z3Y8 459 aa22.9■■□□□ 1.26
CCDC50-202ENST00000392456 UBN2Q6ZU65 1347 aa22.9■■□□□ 1.26
CCDC50-202ENST00000392456 ERVV-1B6SEH8 477 aa22.89■■□□□ 1.26
CCDC50-202ENST00000392456 PTPN12Q05209 780 aaKnown RBP22.89■■□□□ 1.26
CCDC50-202ENST00000392456 AMIGO3Q86WK7 504 aa22.89■■□□□ 1.26
CCDC50-202ENST00000392456 KIF1BPQ96EK5 621 aa22.89■■□□□ 1.26
CCDC50-202ENST00000392456 SBF2Q86WG5 1849 aa22.89■■□□□ 1.25
CCDC50-202ENST00000392456 CAMTA2O94983 1202 aa22.89■■□□□ 1.25
CCDC50-202ENST00000392456 CSPP1Q1MSJ5 1256 aa22.89■■□□□ 1.25
CCDC50-202ENST00000392456 DNAJC2Q99543 621 aaKnown RBP22.89■■□□□ 1.25
CCDC50-202ENST00000392456 CCNL1Q9UK58 526 aaPredicted RBP22.89■■□□□ 1.25
CCDC50-202ENST00000392456 COL15A1P39059 1388 aa22.89■■□□□ 1.25
CCDC50-202ENST00000392456 TBC1D2Q9BYX2 928 aa22.88■■□□□ 1.25
CCDC50-202ENST00000392456 CHMP3Q9Y3E7 222 aa22.88■■□□□ 1.25
CCDC50-202ENST00000392456 NOL7Q9UMY1 257 aaKnown RBP22.88■■□□□ 1.25
CCDC50-202ENST00000392456 BRWD3Q6RI45 1802 aa22.88■■□□□ 1.25
CCDC50-202ENST00000392456 MX1P20591 662 aa22.87■■□□□ 1.25
CCDC50-202ENST00000392456 ATP2B3Q16720 1220 aa22.87■■□□□ 1.25
CCDC50-202ENST00000392456 CCDC85AQ96PX6 553 aaPredicted RBP22.87■■□□□ 1.25
CCDC50-202ENST00000392456 COL5A3P25940 1745 aaPredicted RBP22.87■■□□□ 1.25
CCDC50-202ENST00000392456 ZNF34Q8IZ26 560 aa22.87■■□□□ 1.25
CCDC50-202ENST00000392456 ZBTB38Q8NAP3 1195 aaPredicted RBP22.87■■□□□ 1.25
CCDC50-202ENST00000392456 OSBPL3Q9H4L5 887 aa22.87■■□□□ 1.25
CCDC50-202ENST00000392456 NUP98P52948 1817 aa22.86■■□□□ 1.25
CCDC50-202ENST00000392456 PCCAP05165 728 aaPredicted RBP22.86■■□□□ 1.25
CCDC50-202ENST00000392456 SDSP20132 328 aa22.86■■□□□ 1.25
CCDC50-202ENST00000392456 ZNF772Q68DY9 489 aaPredicted RBP22.86■■□□□ 1.25
CCDC50-202ENST00000392456 CICQ96RK0 1608 aaPredicted RBP22.86■■□□□ 1.25
CCDC50-202ENST00000392456 TRIM37O94972 964 aa22.86■■□□□ 1.25
CCDC50-202ENST00000392456 RBM6P78332 1123 aaKnown RBP22.86■■□□□ 1.25
CCDC50-202ENST00000392456 HSP90AB4PQ58FF6 505 aa22.86■■□□□ 1.25
CCDC50-202ENST00000392456 LRRC4BQ9NT99 713 aa22.86■■□□□ 1.25
CCDC50-202ENST00000392456 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.86■■□□□ 1.25
CCDC50-202ENST00000392456 CHMP5Q9NZZ3 219 aa22.86■■□□□ 1.25
CCDC50-202ENST00000392456 RREB1Q92766 1687 aa22.85■■□□□ 1.25
CCDC50-202ENST00000392456 FAM177BA6PVY3 158 aa22.85■■□□□ 1.25
CCDC50-202ENST00000392456 G3BP1Q13283 466 aaKnown RBP eCLIP22.85■■□□□ 1.25
CCDC50-202ENST00000392456 COPRSQ9NQ92 184 aa22.85■■□□□ 1.25
CCDC50-202ENST00000392456 MAPK8IP2Q13387 824 aaPredicted RBP22.85■■□□□ 1.25
CCDC50-202ENST00000392456 HSP90AB3PQ58FF7 597 aa22.85■■□□□ 1.25
CCDC50-202ENST00000392456 ZNF594Q96JF6 807 aaPredicted RBP22.84■■□□□ 1.25
CCDC50-202ENST00000392456 KCNG1Q9UIX4 513 aa22.84■■□□□ 1.25
CCDC50-202ENST00000392456 TBC1D9Q6ZT07 1266 aa22.84■■□□□ 1.25
CCDC50-202ENST00000392456 RGS17Q9UGC6 210 aaPredicted RBP22.84■■□□□ 1.25
CCDC50-202ENST00000392456 TRMT112Q9UI30 125 aaKnown RBP22.84■■□□□ 1.25
CCDC50-202ENST00000392456 SUSD4Q5VX71 490 aa22.83■■□□□ 1.25
CCDC50-202ENST00000392456 FAM196AQ6ZSG2 479 aa22.83■■□□□ 1.25
CCDC50-202ENST00000392456 STAP2Q9UGK3 403 aa22.83■■□□□ 1.25
CCDC50-202ENST00000392456 CNTNAP4Q9C0A0 1308 aa22.83■■□□□ 1.24
CCDC50-202ENST00000392456 NASPP49321 788 aaPredicted RBP22.83■■□□□ 1.24
CCDC50-202ENST00000392456 CERS3Q8IU89 383 aa22.83■■□□□ 1.24
CCDC50-202ENST00000392456 ZNF710Q8N1W2 664 aa22.83■■□□□ 1.24
CCDC50-202ENST00000392456 EAF2Q96CJ1 260 aaPredicted RBP22.83■■□□□ 1.24
CCDC50-202ENST00000392456 MFAP1P55081 439 aaKnown RBP22.82■■□□□ 1.24
CCDC50-202ENST00000392456 GNPATO15228 680 aa22.82■■□□□ 1.24
CCDC50-202ENST00000392456 ZNF831Q5JPB2 1677 aa22.81■■□□□ 1.24
CCDC50-202ENST00000392456 TBC1D32Q96NH3 1257 aa22.81■■□□□ 1.24
CCDC50-202ENST00000392456 CLASRPQ8N2M8 674 aaKnown RBP22.81■■□□□ 1.24
CCDC50-202ENST00000392456 ERC1Q8IUD2 1116 aa22.8■■□□□ 1.24
CCDC50-202ENST00000392456 CCDC8Q9H0W5 538 aaPredicted RBP22.8■■□□□ 1.24
CCDC50-202ENST00000392456 TLR7Q9NYK1 1049 aaKnown RBP22.8■■□□□ 1.24
CCDC50-202ENST00000392456 SRP68Q9UHB9 627 aaKnown RBP22.8■■□□□ 1.24
CCDC50-202ENST00000392456 IRS4O14654 1257 aaPredicted RBP22.8■■□□□ 1.24
CCDC50-202ENST00000392456 AACSQ86V21 672 aa22.8■■□□□ 1.24
CCDC50-202ENST00000392456 PI4K2BQ8TCG2 481 aa22.8■■□□□ 1.24
CCDC50-202ENST00000392456 NIP7Q9Y221 180 aaKnown RBP eCLIP22.8■■□□□ 1.24
CCDC50-202ENST00000392456 MAP4K4O95819 1239 aaPredicted RBP22.79■■□□□ 1.24
CCDC50-202ENST00000392456 KCNJ4P48050 445 aa22.79■■□□□ 1.24
CCDC50-202ENST00000392456 TFCP2Q12800 502 aa22.79■■□□□ 1.24
CCDC50-202ENST00000392456 RC3H1Q5TC82 1133 aaKnown RBP22.79■■□□□ 1.24
CCDC50-202ENST00000392456 PUS3Q9BZE2 481 aaKnown RBP22.79■■□□□ 1.24
CCDC50-202ENST00000392456 RPS6KA4O75676 772 aa22.79■■□□□ 1.24
CCDC50-202ENST00000392456 LRRC24Q50LG9 513 aa22.79■■□□□ 1.24
CCDC50-202ENST00000392456 ATG9AQ7Z3C6 839 aa22.79■■□□□ 1.24
CCDC50-202ENST00000392456 PLA2G12BQ9BX93 195 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms