RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 COL26A1Q96A83 441 aa7.07□□□□□ -1.28
TRAV40-201ENST00000390467 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.07□□□□□ -1.28
TRAV40-201ENST00000390467 ZBTB42B2RXF5 422 aa7.06□□□□□ -1.28
TRAV40-201ENST00000390467 SASH3O75995 380 aa7.06□□□□□ -1.28
TRAV40-201ENST00000390467 MAP3K6O95382 1288 aa7.06□□□□□ -1.28
TRAV40-201ENST00000390467 TRIP4Q15650 581 aaPredicted RBP7.06□□□□□ -1.28
TRAV40-201ENST00000390467 PSAPL1Q6NUJ1 521 aa7.06□□□□□ -1.28
TRAV40-201ENST00000390467 NUDT8Q8WV74 236 aa7.06□□□□□ -1.28
TRAV40-201ENST00000390467 KCNMB2Q9Y691 235 aa7.06□□□□□ -1.28
TRAV40-201ENST00000390467 SPATA31C1P0DKV0 1188 aa7.05□□□□□ -1.28
TRAV40-201ENST00000390467 RARAP10276 462 aa7.05□□□□□ -1.28
TRAV40-201ENST00000390467 ATP2B4P23634 1241 aa7.05□□□□□ -1.28
TRAV40-201ENST00000390467 SCNN1AP37088 669 aa7.05□□□□□ -1.28
TRAV40-201ENST00000390467 MLLT1Q03111 559 aaPredicted RBP7.05□□□□□ -1.28
TRAV40-201ENST00000390467 PLAURQ03405 335 aa7.05□□□□□ -1.28
TRAV40-201ENST00000390467 DHX32Q7L7V1 743 aaKnown RBP7.05□□□□□ -1.28
TRAV40-201ENST00000390467 CMTR1Q8N1G2 835 aaKnown RBP7.05□□□□□ -1.28
TRAV40-201ENST00000390467 JPH1Q9HDC5 661 aaPredicted RBP7.05□□□□□ -1.28
TRAV40-201ENST00000390467 SEPT3Q9UH03 358 aa7.05□□□□□ -1.28
TRAV40-201ENST00000390467 LILRB5O75023 590 aa7.04□□□□□ -1.28
TRAV40-201ENST00000390467 XYLBO75191 536 aa7.04□□□□□ -1.28
TRAV40-201ENST00000390467 EGFRP00533 1210 aa7.04□□□□□ -1.28
TRAV40-201ENST00000390467 CPB1P15086 417 aa7.04□□□□□ -1.28
TRAV40-201ENST00000390467 BAG6P46379 1132 aa7.04□□□□□ -1.28
TRAV40-201ENST00000390467 C14orf37Q86TY3 774 aa7.04□□□□□ -1.28
TRAV40-201ENST00000390467 PTCD1O75127 700 aaKnown RBP7.03□□□□□ -1.28
TRAV40-201ENST00000390467 AFF1P51825 1210 aaKnown RBP7.03□□□□□ -1.28
TRAV40-201ENST00000390467 FAM35AQ86V20 835 aa7.03□□□□□ -1.28
TRAV40-201ENST00000390467 TRPM4Q8TD43 1214 aa7.03□□□□□ -1.28
TRAV40-201ENST00000390467 LPIN3Q9BQK8 851 aa7.03□□□□□ -1.28
TRAV40-201ENST00000390467 C11orf16Q9NQ32 467 aa7.03□□□□□ -1.28
TRAV40-201ENST00000390467 TMEM88BA6NKF7 163 aa7.02□□□□□ -1.29
TRAV40-201ENST00000390467 ZBTB39O15060 712 aa7.02□□□□□ -1.29
TRAV40-201ENST00000390467 BRD2P25440 801 aaKnown RBP7.02□□□□□ -1.29
TRAV40-201ENST00000390467 GPLD1P80108 840 aa7.02□□□□□ -1.29
TRAV40-201ENST00000390467 PRRT3Q5FWE3 981 aa7.02□□□□□ -1.29
TRAV40-201ENST00000390467 PERM1Q5SV97 790 aa7.02□□□□□ -1.29
TRAV40-201ENST00000390467 LOC100996750A0A140TA64 210 aa7.01□□□□□ -1.29
TRAV40-201ENST00000390467 SPDYE3A6NKU9 549 aa7.01□□□□□ -1.29
TRAV40-201ENST00000390467 ADAM23O75077 832 aa7.01□□□□□ -1.29
TRAV40-201ENST00000390467 ZAP70P43403 619 aa7.01□□□□□ -1.29
TRAV40-201ENST00000390467 GRIK4Q16099 956 aa7.01□□□□□ -1.29
TRAV40-201ENST00000390467 GRIK5Q16478 980 aa7.01□□□□□ -1.29
TRAV40-201ENST00000390467 HFE2Q6ZVN8 426 aa7.01□□□□□ -1.29
TRAV40-201ENST00000390467 KRTAP4-6Q9BYQ5 205 aa7.01□□□□□ -1.29
TRAV40-201ENST00000390467 TLR7Q9NYK1 1049 aaKnown RBP7.01□□□□□ -1.29
TRAV40-201ENST00000390467 A0A0A0MRY4 1105 aa7□□□□□ -1.29
TRAV40-201ENST00000390467 CARNS1A5YM72 827 aa7□□□□□ -1.29
TRAV40-201ENST00000390467 MMP20O60882 483 aa7□□□□□ -1.29
TRAV40-201ENST00000390467 RGS9O75916 674 aaPredicted RBP7□□□□□ -1.29
TRAV40-201ENST00000390467 NRLP54845 237 aa7□□□□□ -1.29
TRAV40-201ENST00000390467 ILDR2Q71H61 639 aa7□□□□□ -1.29
TRAV40-201ENST00000390467 STIM2Q9P246 746 aa7□□□□□ -1.29
TRAV40-201ENST00000390467 FURINP09958 794 aa6.99□□□□□ -1.29
TRAV40-201ENST00000390467 TRIM28Q13263 835 aaKnown RBP6.99□□□□□ -1.29
TRAV40-201ENST00000390467 TRAPPC3LQ5T215 181 aa6.99□□□□□ -1.29
TRAV40-201ENST00000390467 NSUN5Q96P11 429 aaKnown RBP6.99□□□□□ -1.29
TRAV40-201ENST00000390467 FRRS1LQ9P0K9 344 aa6.99□□□□□ -1.29
TRAV40-201ENST00000390467 EIF2AK2P19525 551 aaKnown RBP6.98□□□□□ -1.29
TRAV40-201ENST00000390467 PCSK7Q16549 785 aa6.98□□□□□ -1.29
TRAV40-201ENST00000390467 ATCAYQ86WG3 371 aa6.98□□□□□ -1.29
TRAV40-201ENST00000390467 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
TRAV40-201ENST00000390467 GPR152Q8TDT2 470 aa6.98□□□□□ -1.29
TRAV40-201ENST00000390467 SMG9Q9H0W8 520 aaKnown RBP6.98□□□□□ -1.29
TRAV40-201ENST00000390467 UBAP1LF5GYI3 381 aa6.97□□□□□ -1.29
TRAV40-201ENST00000390467 J3QW42 95 aa6.97□□□□□ -1.29
TRAV40-201ENST00000390467 PPP1R15AO75807 674 aaPredicted RBP6.97□□□□□ -1.29
TRAV40-201ENST00000390467 APBA3O96018 575 aa6.97□□□□□ -1.29
TRAV40-201ENST00000390467 HOXD8P13378 290 aaPredicted RBP6.97□□□□□ -1.29
TRAV40-201ENST00000390467 SELPP16109 830 aa6.97□□□□□ -1.29
TRAV40-201ENST00000390467 DOC2BQ14184 412 aa6.97□□□□□ -1.29
TRAV40-201ENST00000390467 ELMSAN1Q6PJG2 1045 aa6.97□□□□□ -1.29
TRAV40-201ENST00000390467 SHISA2Q6UWI4 295 aa6.97□□□□□ -1.29
TRAV40-201ENST00000390467 K7ELQ4 463 aaPredicted RBP6.96□□□□□ -1.3
TRAV40-201ENST00000390467 PSAPP07602 524 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 SOX18P35713 384 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 GATA4P43694 442 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 MTMR3Q13615 1198 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 COL13A1Q5TAT6 717 aaPredicted RBP6.96□□□□□ -1.3
TRAV40-201ENST00000390467 MSL1Q68DK7 614 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 PHLDB3Q6NSJ2 640 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 NLRP13Q86W25 1043 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 FMR1NBQ8N0W7 255 aaPredicted RBP6.96□□□□□ -1.3
TRAV40-201ENST00000390467 ABTB2Q8N961 1025 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 HELQQ8TDG4 1101 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 PIK3R5Q8WYR1 880 aa6.96□□□□□ -1.3
TRAV40-201ENST00000390467 ELNP15502 786 aa6.95□□□□□ -1.3
TRAV40-201ENST00000390467 ITGB7P26010 798 aa6.95□□□□□ -1.3
TRAV40-201ENST00000390467 SSFA2P28290 1259 aa6.95□□□□□ -1.3
TRAV40-201ENST00000390467 RAC1P63000 192 aa6.95□□□□□ -1.3
TRAV40-201ENST00000390467 TTC9Q92623 222 aa6.95□□□□□ -1.3
TRAV40-201ENST00000390467 PLD4Q96BZ4 506 aa6.95□□□□□ -1.3
TRAV40-201ENST00000390467 LOC102724428A0A0B4J2F2 783 aa6.94□□□□□ -1.3
TRAV40-201ENST00000390467 MPSTP25325 297 aa6.94□□□□□ -1.3
TRAV40-201ENST00000390467 ARID4AP29374 1257 aaPredicted RBP6.94□□□□□ -1.3
TRAV40-201ENST00000390467 SIK1P57059 783 aa6.94□□□□□ -1.3
TRAV40-201ENST00000390467 MBTPS1Q14703 1052 aa6.94□□□□□ -1.3
TRAV40-201ENST00000390467 OR13H1Q8NG92 308 aa6.94□□□□□ -1.3
TRAV40-201ENST00000390467 GTF3C2Q8WUA4 911 aaPredicted RBP6.94□□□□□ -1.3
TRAV40-201ENST00000390467 TPSG1Q9NRR2 321 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms