RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 G2E3Q7L622 706 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 PACS2Q86VP3 889 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 SULF1Q8IWU6 871 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 DDX54Q8TDD1 881 aaKnown RBP6.52□□□□□ -1.37
TRAV16-201ENST00000390444 ZNF496Q96IT1 587 aaPredicted RBP6.52□□□□□ -1.37
TRAV16-201ENST00000390444 NGLY1Q96IV0 654 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 TMEM134Q9H6X4 195 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 TMOD3Q9NYL9 352 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 DBF4Q9UBU7 674 aaPredicted RBP6.52□□□□□ -1.37
TRAV16-201ENST00000390444 PNMA3Q9UL41 463 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 TUBGCP6Q96RT7 1819 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 MYH3P11055 1940 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 CASZ1Q86V15 1759 aa6.52□□□□□ -1.37
TRAV16-201ENST00000390444 C3orf80F5H4A9 247 aa6.51□□□□□ -1.37
TRAV16-201ENST00000390444 ZBTB7BO15156 539 aaPredicted RBP6.51□□□□□ -1.37
TRAV16-201ENST00000390444 CLK2P49760 499 aaKnown RBP6.51□□□□□ -1.37
TRAV16-201ENST00000390444 CCT4P50991 539 aaKnown RBP6.51□□□□□ -1.37
TRAV16-201ENST00000390444 SLC39A6Q13433 755 aa6.51□□□□□ -1.37
TRAV16-201ENST00000390444 FKBP5Q13451 457 aaPredicted RBP6.51□□□□□ -1.37
TRAV16-201ENST00000390444 HDAC1Q13547 482 aaPredicted RBP6.51□□□□□ -1.37
TRAV16-201ENST00000390444 PROX2Q3B8N5 592 aa6.51□□□□□ -1.37
TRAV16-201ENST00000390444 TATDN2Q93075 761 aa6.51□□□□□ -1.37
TRAV16-201ENST00000390444 DDX21Q9NR30 783 aaKnown RBP eCLIP6.51□□□□□ -1.37
TRAV16-201ENST00000390444 HYPKQ9NX55 129 aa6.51□□□□□ -1.37
TRAV16-201ENST00000390444 CHPF2Q9P2E5 772 aa6.51□□□□□ -1.37
TRAV16-201ENST00000390444 USP21Q9UK80 565 aa6.51□□□□□ -1.37
TRAV16-201ENST00000390444 ADCY9O60503 1353 aa6.51□□□□□ -1.37
TRAV16-201ENST00000390444 LAMB2P55268 1798 aa6.51□□□□□ -1.37
TRAV16-201ENST00000390444 MYH14Q7Z406 1995 aaKnown RBP6.51□□□□□ -1.37
TRAV16-201ENST00000390444 RGPD3A6NKT7 1758 aaPredicted RBP6.5□□□□□ -1.37
TRAV16-201ENST00000390444 RGPD4Q7Z3J3 1758 aa6.5□□□□□ -1.37
TRAV16-201ENST00000390444 SCN7AQ01118 1682 aa6.5□□□□□ -1.37
TRAV16-201ENST00000390444 CD46P15529 392 aa6.5□□□□□ -1.37
TRAV16-201ENST00000390444 EIF2S2P20042 333 aaKnown RBP6.5□□□□□ -1.37
TRAV16-201ENST00000390444 ZBED2Q9BTP6 218 aa6.5□□□□□ -1.37
TRAV16-201ENST00000390444 TBC1D2Q9BYX2 928 aa6.5□□□□□ -1.37
TRAV16-201ENST00000390444 PCDHB15Q9Y5E8 787 aa6.5□□□□□ -1.37
TRAV16-201ENST00000390444 AFF2P51816 1311 aa6.5□□□□□ -1.37
TRAV16-201ENST00000390444 PRAMEF22A3QJZ6 481 aa6.49□□□□□ -1.37
TRAV16-201ENST00000390444 MCM6Q14566 821 aa6.49□□□□□ -1.37
TRAV16-201ENST00000390444 PROSER3Q2NL68 480 aa6.49□□□□□ -1.37
TRAV16-201ENST00000390444 MEX3CQ5U5Q3 659 aaKnown RBP6.49□□□□□ -1.37
TRAV16-201ENST00000390444 LRP10Q7Z4F1 713 aa6.49□□□□□ -1.37
TRAV16-201ENST00000390444 MARCH10Q8NA82 808 aaPredicted RBP6.49□□□□□ -1.37
TRAV16-201ENST00000390444 PIGBQ92521 554 aa6.49□□□□□ -1.37
TRAV16-201ENST00000390444 NECTIN2Q92692 538 aa6.49□□□□□ -1.37
TRAV16-201ENST00000390444 ZMYND15Q9H091 742 aa6.49□□□□□ -1.37
TRAV16-201ENST00000390444 RWDD1Q9H446 243 aaPredicted RBP6.49□□□□□ -1.37
TRAV16-201ENST00000390444 TRPC5Q9UL62 973 aaPredicted RBP6.49□□□□□ -1.37
TRAV16-201ENST00000390444 CCDC9Q9Y3X0 531 aaKnown RBP6.49□□□□□ -1.37
TRAV16-201ENST00000390444 AK9Q5TCS8 1911 aa6.48□□□□□ -1.37
TRAV16-201ENST00000390444 C4AP0C0L4 1744 aa6.48□□□□□ -1.37
TRAV16-201ENST00000390444 C4BP0C0L5 1744 aa6.48□□□□□ -1.37
TRAV16-201ENST00000390444 F6X3S4 739 aa6.48□□□□□ -1.37
TRAV16-201ENST00000390444 DDX58O95786 925 aaKnown RBP6.48□□□□□ -1.37
TRAV16-201ENST00000390444 IGHDP01880 384 aa6.48□□□□□ -1.37
TRAV16-201ENST00000390444 PBX2P40425 430 aa6.48□□□□□ -1.37
TRAV16-201ENST00000390444 FAM98CQ17RN3 349 aaKnown RBP6.48□□□□□ -1.37
TRAV16-201ENST00000390444 VARS2Q5ST30 1063 aaKnown RBP6.48□□□□□ -1.37
TRAV16-201ENST00000390444 SMC5Q8IY18 1101 aa6.48□□□□□ -1.37
TRAV16-201ENST00000390444 DNAAF4Q8WXU2 420 aa6.48□□□□□ -1.37
TRAV16-201ENST00000390444 GJD4Q96KN9 370 aaPredicted RBP6.48□□□□□ -1.37
TRAV16-201ENST00000390444 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRAV16-201ENST00000390444 TEX13AQ9BXU3 409 aaPredicted RBP6.48□□□□□ -1.37
TRAV16-201ENST00000390444 PHAXQ9H814 394 aaKnown RBP6.48□□□□□ -1.37
TRAV16-201ENST00000390444 ATG3Q9NT62 314 aa6.48□□□□□ -1.37
TRAV16-201ENST00000390444 TNS1Q9HBL0 1735 aaKnown RBP6.47□□□□□ -1.37
TRAV16-201ENST00000390444 DDX11L8A8MPP1 907 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 ALDH1L1O75891 902 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 ANXA1P04083 346 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 GNAI3P08754 354 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 PSEN2P49810 448 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 BEND3Q5T5X7 828 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 LHX8Q68G74 356 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 SLC4A10Q6U841 1118 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 KSR2Q6VAB6 950 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 RPAP2Q8IXW5 612 aaPredicted RBP6.47□□□□□ -1.37
TRAV16-201ENST00000390444 ARXQ96QS3 562 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 MEIS3Q99687 375 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 SLC4A5Q9BY07 1137 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 SRCIN1Q9C0H9 1055 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 POLR3EQ9NVU0 708 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 ASAP1Q9ULH1 1129 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 USP16Q9Y5T5 823 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 COL24A1Q17RW2 1714 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 UBR3Q6ZT12 1888 aa6.47□□□□□ -1.37
TRAV16-201ENST00000390444 COL15A1P39059 1388 aa6.46□□□□□ -1.37
TRAV16-201ENST00000390444 PI4KAP2A4QPH2 592 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 SMAPO00193 183 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 ARHGAP33O14559 1287 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 EMP3P54852 163 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 NBPF14Q5TI25 921 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 CEP85Q6P2H3 762 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 NBPF10Q6P3W6 841 aaKnown RBP6.46□□□□□ -1.38
TRAV16-201ENST00000390444 NBPF15Q8N660 670 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 ANKRD44Q8N8A2 993 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 PI4KAP1Q8N8J0 262 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 PROCA1Q8NCQ7 364 aaPredicted RBP6.46□□□□□ -1.38
TRAV16-201ENST00000390444 SPIRE2Q8WWL2 714 aa6.46□□□□□ -1.38
TRAV16-201ENST00000390444 SMARCC1Q92922 1105 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms