RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 POLR3GO15318 223 aaPredicted RBP22.17■■□□□ 1.14
PPFIA1-202ENST00000389547 FILIP1Q7Z7B0 1213 aa22.17■■□□□ 1.14
PPFIA1-202ENST00000389547 OGFRQ9NZT2 677 aa22.17■■□□□ 1.14
PPFIA1-202ENST00000389547 IFIT1P09914 478 aaKnown RBP22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 BEND3Q5T5X7 828 aa22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 TRIM34Q9BYJ4 488 aa22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 BRPF1P55201 1214 aaPredicted RBP22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 CWC15Q9P013 229 aaKnown RBP22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 ERVV-2B6SEH9 535 aa22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 GCKRQ14397 625 aa22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 C3P01024 1663 aa22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 CAMK4Q16566 473 aa22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 DDX46Q7L014 1031 aaKnown RBP22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 FEZ1Q99689 392 aa22.16■■□□□ 1.14
PPFIA1-202ENST00000389547 CD2BP2O95400 341 aaKnown RBP22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 KCNQ4P56696 695 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 PKP1Q13835 747 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 GIMAP6Q6P9H5 292 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 PLBD2Q8NHP8 589 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 ZNF652Q9Y2D9 606 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 UBR1Q8IWV7 1749 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 PRPF40BQ6NWY9 871 aaKnown RBP22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 TNS3Q68CZ2 1445 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 IFT172Q9UG01 1749 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 HIP1O00291 1037 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 GOLIM4O00461 696 aa22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 JAKMIP1Q96N16 626 aaKnown RBP22.15■■□□□ 1.14
PPFIA1-202ENST00000389547 NIP7Q9Y221 180 aaKnown RBP eCLIP22.14■■□□□ 1.14
PPFIA1-202ENST00000389547 IGHMBP2P38935 993 aaKnown RBP22.14■■□□□ 1.13
PPFIA1-202ENST00000389547 ANKRD18BA2A2Z9 1011 aa22.14■■□□□ 1.13
PPFIA1-202ENST00000389547 IRX3P78415 501 aaPredicted RBP22.14■■□□□ 1.13
PPFIA1-202ENST00000389547 NOM1Q5C9Z4 860 aaKnown RBP22.14■■□□□ 1.13
PPFIA1-202ENST00000389547 HELBQ8NG08 1087 aaPredicted RBP22.14■■□□□ 1.13
PPFIA1-202ENST00000389547 ZNF594Q96JF6 807 aaPredicted RBP22.14■■□□□ 1.13
PPFIA1-202ENST00000389547 KDM4AO75164 1064 aa22.13■■□□□ 1.13
PPFIA1-202ENST00000389547 TRDNQ13061 729 aa22.13■■□□□ 1.13
PPFIA1-202ENST00000389547 STK3Q13188 491 aa22.13■■□□□ 1.13
PPFIA1-202ENST00000389547 UVSSAQ2YD98 709 aa22.13■■□□□ 1.13
PPFIA1-202ENST00000389547 ABCF2Q9UG63 623 aa22.13■■□□□ 1.13
PPFIA1-202ENST00000389547 TPM4P67936 248 aa22.13■■□□□ 1.13
PPFIA1-202ENST00000389547 TRMT1Q9NXH9 659 aaKnown RBP22.12■■□□□ 1.13
PPFIA1-202ENST00000389547 USP21Q9UK80 565 aa22.12■■□□□ 1.13
PPFIA1-202ENST00000389547 SKIDA1Q1XH10 827 aa22.12■■□□□ 1.13
PPFIA1-202ENST00000389547 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.12■■□□□ 1.13
PPFIA1-202ENST00000389547 NEURL1BA8MQ27 555 aa22.12■■□□□ 1.13
PPFIA1-202ENST00000389547 TIMM10P62072 90 aa22.12■■□□□ 1.13
PPFIA1-202ENST00000389547 PTPN14Q15678 1187 aa22.12■■□□□ 1.13
PPFIA1-202ENST00000389547 RALYLQ86SE5 291 aaKnown RBP22.12■■□□□ 1.13
PPFIA1-202ENST00000389547 KDRP35968 1356 aa22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 H3BQV1 296 aa22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 TFCP2Q12800 502 aa22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 IFFO2Q5TF58 517 aa22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 NOL10Q9BSC4 688 aaKnown RBP22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 TSPYL1Q9H0U9 437 aa22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 TNMDQ9H2S6 317 aa22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 KLHL34Q8N239 644 aa22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 TMX3Q96JJ7 454 aa22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 ZFP91Q96JP5 570 aaPredicted RBP22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 NDUFB9Q9Y6M9 179 aa22.11■■□□□ 1.13
PPFIA1-202ENST00000389547 IQSEC2Q5JU85 1478 aa22.1■■□□□ 1.13
PPFIA1-202ENST00000389547 CASTP20810 708 aaKnown RBP22.09■■□□□ 1.13
PPFIA1-202ENST00000389547 USP48Q86UV5 1035 aa22.09■■□□□ 1.13
PPFIA1-202ENST00000389547 IQSEC3Q9UPP2 1182 aaPredicted RBP22.09■■□□□ 1.13
PPFIA1-202ENST00000389547 CCDC186Q7Z3E2 898 aa22.09■■□□□ 1.13
PPFIA1-202ENST00000389547 CCDC24Q8N4L8 307 aa22.09■■□□□ 1.13
PPFIA1-202ENST00000389547 CYP46A1Q9Y6A2 500 aa22.09■■□□□ 1.13
PPFIA1-202ENST00000389547 IRS4O14654 1257 aaPredicted RBP22.08■■□□□ 1.13
PPFIA1-202ENST00000389547 ATP2B3Q16720 1220 aa22.08■■□□□ 1.13
PPFIA1-202ENST00000389547 RRP12Q5JTH9 1297 aaKnown RBP22.08■■□□□ 1.13
PPFIA1-202ENST00000389547 PIGBQ92521 554 aa22.08■■□□□ 1.13
PPFIA1-202ENST00000389547 AKAP2Q9Y2D5 859 aa22.08■■□□□ 1.13
PPFIA1-202ENST00000389547 NUP62CLQ9H1M0 184 aa22.08■■□□□ 1.13
PPFIA1-202ENST00000389547 CKAP2LQ8IYA6 745 aa22.08■■□□□ 1.12
PPFIA1-202ENST00000389547 GPT2Q8TD30 523 aa22.08■■□□□ 1.12
PPFIA1-202ENST00000389547 COL3A1P02461 1466 aaPredicted RBP22.08■■□□□ 1.12
PPFIA1-202ENST00000389547 PSMA5P28066 241 aa22.08■■□□□ 1.12
PPFIA1-202ENST00000389547 AK7Q96M32 723 aa22.08■■□□□ 1.12
PPFIA1-202ENST00000389547 CPLX1O14810 134 aa22.07■■□□□ 1.12
PPFIA1-202ENST00000389547 SMARCC1Q92922 1105 aaPredicted RBP22.07■■□□□ 1.12
PPFIA1-202ENST00000389547 EVI5LQ96CN4 794 aa22.07■■□□□ 1.12
PPFIA1-202ENST00000389547 CRB1P82279 1406 aa22.07■■□□□ 1.12
PPFIA1-202ENST00000389547 ZBTB22O15209 634 aa22.07■■□□□ 1.12
PPFIA1-202ENST00000389547 GSPT1P15170 499 aaKnown RBP22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 FERMT3Q86UX7 667 aa22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 ZSCAN20P17040 1043 aaPredicted RBP22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 PTGS1P23219 599 aa22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 BLOC1S2Q6QNY1 142 aa22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 ESYT1Q9BSJ8 1104 aa22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 LRP2BPQ9P2M1 347 aa22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 RFC4P35249 363 aa22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 MAP3K11Q16584 847 aa22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 SSH3Q8TE77 659 aa22.06■■□□□ 1.12
PPFIA1-202ENST00000389547 NFXL1Q6ZNB6 911 aa22.05■■□□□ 1.12
PPFIA1-202ENST00000389547 TCEANC2Q96MN5 208 aa22.05■■□□□ 1.12
PPFIA1-202ENST00000389547 CDCA7Q9BWT1 371 aaPredicted RBP22.05■■□□□ 1.12
PPFIA1-202ENST00000389547 SF3A1Q15459 793 aaKnown RBP22.05■■□□□ 1.12
PPFIA1-202ENST00000389547 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.05■■□□□ 1.122e-6■■■□□ 16.2
PPFIA1-202ENST00000389547 ZBTB1Q9Y2K1 713 aa22.05■■□□□ 1.12
PPFIA1-202ENST00000389547 LEKR1Q6ZMV7 388 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 CEP135Q66GS9 1140 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms