RNA–Protein interactions for RNA: ENST00000381756.9

GGA1-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-204ENST00000381756 USP16Q9Y5T5 823 aa31.34■■■□□ 2.61
GGA1-204ENST00000381756 PRR36Q9H6K5 1346 aa31.33■■■□□ 2.61
GGA1-204ENST00000381756 GNAT3A8MTJ3 354 aa31.33■■■□□ 2.61
GGA1-204ENST00000381756 ATP8B1O43520 1251 aa31.33■■■□□ 2.61
GGA1-204ENST00000381756 NAT10Q9H0A0 1025 aaKnown RBP31.33■■■□□ 2.61
GGA1-204ENST00000381756 ARGLU1Q9NWB6 273 aaPredicted RBP31.33■■■□□ 2.61
GGA1-204ENST00000381756 ERICH4A6NGS2 130 aa31.33■■■□□ 2.61
GGA1-204ENST00000381756 TOB2Q14106 344 aaPredicted RBP31.33■■■□□ 2.61
GGA1-204ENST00000381756 TEX35Q5T0J7 233 aa31.33■■■□□ 2.61
GGA1-204ENST00000381756 ATL3Q6DD88 541 aa31.33■■■□□ 2.61
GGA1-204ENST00000381756 DHX40Q8IX18 779 aaKnown RBP31.33■■■□□ 2.61
GGA1-204ENST00000381756 TRMT1Q9NXH9 659 aaKnown RBP31.32■■■□□ 2.6
GGA1-204ENST00000381756 ZKSCAN7Q9P0L1 754 aaPredicted RBP31.32■■■□□ 2.6
GGA1-204ENST00000381756 CEP57L1Q8IYX8 460 aa31.31■■■□□ 2.6
GGA1-204ENST00000381756 JCADQ9P266 1359 aa31.31■■■□□ 2.6
GGA1-204ENST00000381756 NPHP4O75161 1426 aaPredicted RBP31.31■■■□□ 2.6
GGA1-204ENST00000381756 USP6P35125 1406 aa31.31■■■□□ 2.6
GGA1-204ENST00000381756 OS9Q13438 667 aaPredicted RBP31.31■■■□□ 2.6
GGA1-204ENST00000381756 RIMS1Q86UR5 1692 aaKnown RBP31.3■■■□□ 2.6
GGA1-204ENST00000381756 PLEKHG3A1L390 1219 aa31.3■■■□□ 2.6
GGA1-204ENST00000381756 NRDCO43847 1150 aa31.3■■■□□ 2.6
GGA1-204ENST00000381756 TPM4P67936 248 aa31.3■■■□□ 2.6
GGA1-204ENST00000381756 TAF7Q15545 349 aaPredicted RBP31.3■■■□□ 2.6
GGA1-204ENST00000381756 HDGFL1Q5TGJ6 251 aa31.3■■■□□ 2.6
GGA1-204ENST00000381756 TOPAZ1Q8N9V7 1692 aa31.3■■■□□ 2.6
GGA1-204ENST00000381756 CCP110O43303 1012 aa31.3■■■□□ 2.6
GGA1-204ENST00000381756 PNMA6AP0CW24 399 aaPredicted RBP31.3■■■□□ 2.6
GGA1-204ENST00000381756 CLCN6P51797 869 aa31.3■■■□□ 2.6
GGA1-204ENST00000381756 RCOR1Q9UKL0 485 aa31.3■■■□□ 2.6
GGA1-204ENST00000381756 DTNBO60941 627 aa31.29■■■□□ 2.6
GGA1-204ENST00000381756 KRT32Q14532 448 aa31.29■■■□□ 2.6
GGA1-204ENST00000381756 GTF3C6Q969F1 213 aa31.29■■■□□ 2.6
GGA1-204ENST00000381756 SRRTQ9BXP5 876 aaKnown RBP31.29■■■□□ 2.6
GGA1-204ENST00000381756 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP31.29■■■□□ 2.64e-9■■■□□ 15.9
GGA1-204ENST00000381756 METP08581 1390 aa31.29■■■□□ 2.6
GGA1-204ENST00000381756 ZRANB2O95218 330 aaKnown RBP eCLIP31.28■■■□□ 2.6
GGA1-204ENST00000381756 IFIT2P09913 472 aaKnown RBP31.28■■■□□ 2.6
GGA1-204ENST00000381756 NBPF7P0C2Y1 421 aaPredicted RBP31.28■■■□□ 2.6
GGA1-204ENST00000381756 ERCC6LQ2NKX8 1250 aa31.28■■■□□ 2.6
GGA1-204ENST00000381756 BEND3Q5T5X7 828 aa31.28■■■□□ 2.6
GGA1-204ENST00000381756 NECTIN2Q92692 538 aa31.28■■■□□ 2.6
GGA1-204ENST00000381756 HDAC5Q9UQL6 1122 aa31.28■■■□□ 2.6
GGA1-204ENST00000381756 TXNDC2Q86VQ3 553 aa31.28■■■□□ 2.6
GGA1-204ENST00000381756 TPM1P09493 284 aa31.27■■■□□ 2.6
GGA1-204ENST00000381756 CAPN2P17655 700 aa31.27■■■□□ 2.6
GGA1-204ENST00000381756 E4F1Q66K89 784 aaPredicted RBP31.27■■■□□ 2.6
GGA1-204ENST00000381756 CCDC73Q6ZRK6 1079 aa31.27■■■□□ 2.6
GGA1-204ENST00000381756 PPP1R13BQ96KQ4 1090 aa31.27■■■□□ 2.6
GGA1-204ENST00000381756 ST7Q9NRC1 585 aa31.27■■■□□ 2.6
GGA1-204ENST00000381756 HOXB7P09629 217 aa31.27■■■□□ 2.6
GGA1-204ENST00000381756 MUM1L1Q5H9M0 696 aa31.27■■■□□ 2.6
GGA1-204ENST00000381756 TXLNBQ8N3L3 684 aa31.27■■■□□ 2.6
GGA1-204ENST00000381756 MED23Q9ULK4 1368 aa31.26■■■□□ 2.59
GGA1-204ENST00000381756 CEP170BQ9Y4F5 1589 aaPredicted RBP31.26■■■□□ 2.59
GGA1-204ENST00000381756 H3BQV1 296 aa31.25■■■□□ 2.59
GGA1-204ENST00000381756 KINO60870 393 aaKnown RBP31.25■■■□□ 2.59
GGA1-204ENST00000381756 HNRNPH2P55795 449 aaKnown RBP31.25■■■□□ 2.59
GGA1-204ENST00000381756 NMIQ13287 307 aaPredicted RBP31.25■■■□□ 2.59
GGA1-204ENST00000381756 IFFO2Q5TF58 517 aa31.25■■■□□ 2.59
GGA1-204ENST00000381756 CCAR1Q8IX12 1150 aaKnown RBP31.25■■■□□ 2.59
GGA1-204ENST00000381756 BRF1Q92994 677 aa31.25■■■□□ 2.59
GGA1-204ENST00000381756 BPIFA3Q9BQP9 254 aa31.25■■■□□ 2.59
GGA1-204ENST00000381756 PHLPP2Q6ZVD8 1323 aa31.25■■■□□ 2.59
GGA1-204ENST00000381756 PLA2G4AP47712 749 aa31.25■■■□□ 2.59
GGA1-204ENST00000381756 DNAAF4Q8WXU2 420 aa31.25■■■□□ 2.59
GGA1-204ENST00000381756 LLPHQ9BRT6 129 aaKnown RBP31.25■■■□□ 2.59
GGA1-204ENST00000381756 PHAXQ9H814 394 aaKnown RBP31.25■■■□□ 2.59
GGA1-204ENST00000381756 ACEP12821 1306 aa31.25■■■□□ 2.59
GGA1-204ENST00000381756 NAA16Q6N069 864 aaPredicted RBP31.24■■■□□ 2.59
GGA1-204ENST00000381756 TMCO3Q6UWJ1 677 aa31.24■■■□□ 2.59
GGA1-204ENST00000381756 DDX54Q8TDD1 881 aaKnown RBP31.24■■■□□ 2.59
GGA1-204ENST00000381756 FAM160A1Q05DH4 1040 aa31.24■■■□□ 2.59
GGA1-204ENST00000381756 NBPF11Q86T75 865 aa31.24■■■□□ 2.59
GGA1-204ENST00000381756 EYA1Q99502 592 aa31.24■■■□□ 2.59
GGA1-204ENST00000381756 ENGASEQ8NFI3 743 aa31.23■■■□□ 2.59
GGA1-204ENST00000381756 ARHGAP29Q52LW3 1261 aa31.22■■■□□ 2.59
GGA1-204ENST00000381756 FAM227BQ96M60 508 aa31.22■■■□□ 2.59
GGA1-204ENST00000381756 ADD1P35611 737 aaKnown RBP31.22■■■□□ 2.59
GGA1-204ENST00000381756 USPL1Q5W0Q7 1092 aa31.21■■■□□ 2.59
GGA1-204ENST00000381756 SYT10Q6XYQ8 523 aa31.21■■■□□ 2.59
GGA1-204ENST00000381756 UBXN6Q9BZV1 441 aa31.21■■■□□ 2.59
GGA1-204ENST00000381756 PTPRUQ92729 1446 aa31.2■■■□□ 2.59
GGA1-204ENST00000381756 SFPQP23246 707 aaKnown RBP eCLIP31.2■■■□□ 2.59
GGA1-204ENST00000381756 SMARCC2Q8TAQ2 1214 aa31.2■■■□□ 2.59
GGA1-204ENST00000381756 UBXN4Q92575 508 aa31.2■■■□□ 2.59
GGA1-204ENST00000381756 ORC3Q9UBD5 711 aaPredicted RBP31.2■■■□□ 2.59
GGA1-204ENST00000381756 VGLL3A8MV65 326 aa31.19■■■□□ 2.58
GGA1-204ENST00000381756 AOPEPQ8N6M6 819 aa31.19■■■□□ 2.58
GGA1-204ENST00000381756 ZNF396Q96N95 335 aaPredicted RBP31.19■■■□□ 2.58
GGA1-204ENST00000381756 ETF1P62495 437 aaKnown RBP31.19■■■□□ 2.58
GGA1-204ENST00000381756 IL17REQ8NFR9 667 aa31.19■■■□□ 2.58
GGA1-204ENST00000381756 GPS2Q13227 327 aa31.18■■■□□ 2.58
GGA1-204ENST00000381756 MYH15Q9Y2K3 1946 aa31.18■■■□□ 2.58
GGA1-204ENST00000381756 JAK2O60674 1132 aa31.18■■■□□ 2.58
GGA1-204ENST00000381756 GOLPH3LQ9H4A5 285 aa31.18■■■□□ 2.58
GGA1-204ENST00000381756 AACSQ86V21 672 aa31.17■■■□□ 2.58
GGA1-204ENST00000381756 BCL11BQ9C0K0 894 aaPredicted RBP31.17■■■□□ 2.58
GGA1-204ENST00000381756 FEZ2Q9UHY8 353 aaPredicted RBP31.17■■■□□ 2.58
GGA1-204ENST00000381756 EFCAB8A8MWE9 144 aa31.16■■■□□ 2.58
GGA1-204ENST00000381756 RAD51AP2Q09MP3 1159 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms