RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 CCDC152Q4G0S7 254 aa25.32■■□□□ 1.64
TSSC4-203ENST00000380996 POLRMTO00411 1230 aaKnown RBP25.31■■□□□ 1.64
TSSC4-203ENST00000380996 OS9Q13438 667 aaPredicted RBP25.31■■□□□ 1.64
TSSC4-203ENST00000380996 CHD1LQ86WJ1 897 aa25.31■■□□□ 1.64
TSSC4-203ENST00000380996 ERC1Q8IUD2 1116 aa25.31■■□□□ 1.64
TSSC4-203ENST00000380996 QSER1Q2KHR3 1735 aa25.31■■□□□ 1.64
TSSC4-203ENST00000380996 ST5P78524 1137 aa25.3■■□□□ 1.64
TSSC4-203ENST00000380996 PTPN12Q05209 780 aaKnown RBP25.3■■□□□ 1.64
TSSC4-203ENST00000380996 FAM161AQ3B820 660 aa25.3■■□□□ 1.64
TSSC4-203ENST00000380996 SLC16A10Q8TF71 515 aa25.3■■□□□ 1.64
TSSC4-203ENST00000380996 NLRP3Q96P20 1036 aa25.3■■□□□ 1.64
TSSC4-203ENST00000380996 PA2G4Q9UQ80 394 aaKnown RBP25.3■■□□□ 1.64
TSSC4-203ENST00000380996 ANKRD18BA2A2Z9 1011 aa25.29■■□□□ 1.64
TSSC4-203ENST00000380996 APBB1O00213 710 aa25.29■■□□□ 1.64
TSSC4-203ENST00000380996 DDR1Q08345 913 aa25.29■■□□□ 1.64
TSSC4-203ENST00000380996 TAF7LQ5H9L4 462 aa25.29■■□□□ 1.64
TSSC4-203ENST00000380996 LRRCC1Q9C099 1032 aa25.29■■□□□ 1.64
TSSC4-203ENST00000380996 GREM2Q9H772 168 aa25.29■■□□□ 1.64
TSSC4-203ENST00000380996 PARP3Q9Y6F1 533 aa25.29■■□□□ 1.64
TSSC4-203ENST00000380996 ITGA6P23229 1130 aa25.28■■□□□ 1.64
TSSC4-203ENST00000380996 SF3B3Q15393 1217 aaKnown RBP25.28■■□□□ 1.64
TSSC4-203ENST00000380996 PRR5LQ6MZQ0 368 aa25.28■■□□□ 1.64
TSSC4-203ENST00000380996 CCDC85AQ96PX6 553 aaPredicted RBP25.28■■□□□ 1.64
TSSC4-203ENST00000380996 MMP10P09238 476 aa25.27■■□□□ 1.64
TSSC4-203ENST00000380996 KIF1BPQ96EK5 621 aa25.27■■□□□ 1.64
TSSC4-203ENST00000380996 ABCC12Q96J65 1359 aa25.27■■□□□ 1.64
TSSC4-203ENST00000380996 MSL1Q68DK7 614 aa25.27■■□□□ 1.64
TSSC4-203ENST00000380996 PELP1Q8IZL8 1130 aaKnown RBP25.27■■□□□ 1.64
TSSC4-203ENST00000380996 KLHDC4Q8TBB5 520 aa25.27■■□□□ 1.64
TSSC4-203ENST00000380996 LNPKQ9C0E8 428 aa25.27■■□□□ 1.64
TSSC4-203ENST00000380996 SIL1Q9H173 461 aa25.27■■□□□ 1.64
TSSC4-203ENST00000380996 FBXO3Q9UK99 471 aa25.27■■□□□ 1.64
TSSC4-203ENST00000380996 RTL9Q8NET4 1388 aa25.27■■□□□ 1.64
TSSC4-203ENST00000380996 RHPN1Q8TCX5 695 aa25.26■■□□□ 1.63
TSSC4-203ENST00000380996 RIC1Q4ADV7 1423 aa25.25■■□□□ 1.63
TSSC4-203ENST00000380996 CIAO1O76071 339 aa25.23■■□□□ 1.63
TSSC4-203ENST00000380996 CCDC24Q8N4L8 307 aa25.23■■□□□ 1.63
TSSC4-203ENST00000380996 LAMB2P55268 1798 aa25.23■■□□□ 1.63
TSSC4-203ENST00000380996 EYA2O00167 538 aa25.22■■□□□ 1.63
TSSC4-203ENST00000380996 IL15P40933 162 aaPredicted RBP25.22■■□□□ 1.63
TSSC4-203ENST00000380996 ZNF594Q96JF6 807 aaPredicted RBP25.22■■□□□ 1.63
TSSC4-203ENST00000380996 CDC5LQ99459 802 aaKnown RBP25.22■■□□□ 1.63
TSSC4-203ENST00000380996 DDX60Q8IY21 1712 aaKnown RBP25.22■■□□□ 1.63
TSSC4-203ENST00000380996 SMARCA5O60264 1052 aaPredicted RBP25.22■■□□□ 1.63
TSSC4-203ENST00000380996 RGS3P49796 1198 aa25.22■■□□□ 1.63
TSSC4-203ENST00000380996 C3orf67Q6ZVT6 689 aa25.22■■□□□ 1.63
TSSC4-203ENST00000380996 MYH3P11055 1940 aa25.21■■□□□ 1.63
TSSC4-203ENST00000380996 LDHAL6AQ6ZMR3 332 aa25.21■■□□□ 1.63
TSSC4-203ENST00000380996 IGHMBP2P38935 993 aaKnown RBP25.2■■□□□ 1.62
TSSC4-203ENST00000380996 CLASRPQ8N2M8 674 aaKnown RBP25.2■■□□□ 1.62
TSSC4-203ENST00000380996 BRIP1Q9BX63 1249 aa25.2■■□□□ 1.62
TSSC4-203ENST00000380996 PDGFDQ9GZP0 370 aaPredicted RBP25.2■■□□□ 1.62
TSSC4-203ENST00000380996 SASH1O94885 1247 aa25.19■■□□□ 1.62
TSSC4-203ENST00000380996 SKAP1Q86WV1 359 aa25.19■■□□□ 1.62
TSSC4-203ENST00000380996 SEC31BQ9NQW1 1179 aa25.19■■□□□ 1.62
TSSC4-203ENST00000380996 PDE4AP27815 886 aa25.18■■□□□ 1.62
TSSC4-203ENST00000380996 R3HDM1Q15032 1099 aaKnown RBP25.18■■□□□ 1.62
TSSC4-203ENST00000380996 DDX46Q7L014 1031 aaKnown RBP25.18■■□□□ 1.62
TSSC4-203ENST00000380996 ATG9AQ7Z3C6 839 aa25.18■■□□□ 1.62
TSSC4-203ENST00000380996 MPHOSPH8Q99549 860 aa25.18■■□□□ 1.62
TSSC4-203ENST00000380996 BCL11AQ9H165 835 aa25.18■■□□□ 1.62
TSSC4-203ENST00000380996 IL1RAPL2Q9NP60 686 aa25.18■■□□□ 1.62
TSSC4-203ENST00000380996 CNNM1Q9NRU3 951 aa25.18■■□□□ 1.62
TSSC4-203ENST00000380996 LRRC24Q50LG9 513 aa25.17■■□□□ 1.62
TSSC4-203ENST00000380996 ANKRD18AQ8IVF6 992 aa25.17■■□□□ 1.62
TSSC4-203ENST00000380996 RPGRQ92834 1020 aaKnown RBP25.17■■□□□ 1.62
TSSC4-203ENST00000380996 PUS3Q9BZE2 481 aaKnown RBP25.17■■□□□ 1.62
TSSC4-203ENST00000380996 CEP126Q9P2H0 1117 aa25.17■■□□□ 1.62
TSSC4-203ENST00000380996 KLRG2A4D1S0 409 aaPredicted RBP25.16■■□□□ 1.62
TSSC4-203ENST00000380996 PDE6BP35913 854 aa25.16■■□□□ 1.62
TSSC4-203ENST00000380996 CRY2Q49AN0 593 aa25.16■■□□□ 1.62
TSSC4-203ENST00000380996 TFCP2Q12800 502 aa25.15■■□□□ 1.62
TSSC4-203ENST00000380996 RIPOR2Q9Y4F9 1068 aa25.15■■□□□ 1.62
TSSC4-203ENST00000380996 C16orf71Q8IYS4 520 aaPredicted RBP25.14■■□□□ 1.62
TSSC4-203ENST00000380996 MTFR1LQ9H019 292 aa25.14■■□□□ 1.62
TSSC4-203ENST00000380996 GPR108Q9NPR9 543 aa25.14■■□□□ 1.62
TSSC4-203ENST00000380996 NRXN2Q9P2S2 1712 aa25.13■■□□□ 1.61
TSSC4-203ENST00000380996 IFIT2P09913 472 aaKnown RBP25.13■■□□□ 1.61
TSSC4-203ENST00000380996 RPS8P62241 208 aaKnown RBP25.13■■□□□ 1.61
TSSC4-203ENST00000380996 RBM17Q96I25 401 aaKnown RBP25.13■■□□□ 1.61
TSSC4-203ENST00000380996 MROH5Q6ZUA9 1318 aa25.13■■□□□ 1.61
TSSC4-203ENST00000380996 METTL24Q5JXM2 366 aa25.12■■□□□ 1.61
TSSC4-203ENST00000380996 PLEKHM2Q8IWE5 1019 aa25.12■■□□□ 1.61
TSSC4-203ENST00000380996 BSDC1Q9NW68 430 aaPredicted RBP25.12■■□□□ 1.61
TSSC4-203ENST00000380996 AKAP2Q9Y2D5 859 aa25.12■■□□□ 1.61
TSSC4-203ENST00000380996 AACSQ86V21 672 aa25.12■■□□□ 1.61
TSSC4-203ENST00000380996 ZBTB7AO95365 584 aa25.11■■□□□ 1.61
TSSC4-203ENST00000380996 POLD1P28340 1107 aa25.11■■□□□ 1.61
TSSC4-203ENST00000380996 HOXA10P31260 410 aaPredicted RBP25.11■■□□□ 1.61
TSSC4-203ENST00000380996 GRAPQ13588 217 aa25.11■■□□□ 1.61
TSSC4-203ENST00000380996 GRAPLQ8TC17 118 aaPredicted RBP25.11■■□□□ 1.61
TSSC4-203ENST00000380996 CELF1Q92879 486 aaKnown RBP25.11■■□□□ 1.61
TSSC4-203ENST00000380996 MX1P20591 662 aa25.1■■□□□ 1.61
TSSC4-203ENST00000380996 TNNI3KQ59H18 835 aa25.1■■□□□ 1.61
TSSC4-203ENST00000380996 OTUD7AQ8TE49 926 aaPredicted RBP25.1■■□□□ 1.61
TSSC4-203ENST00000380996 GPATCH3Q96I76 525 aa25.1■■□□□ 1.61
TSSC4-203ENST00000380996 FPGT-TNNI3KV9GXZ4 949 aa25.1■■□□□ 1.61
TSSC4-203ENST00000380996 TNRC6CQ9HCJ0 1690 aaKnown RBP25.09■■□□□ 1.61
TSSC4-203ENST00000380996 EAF2Q96CJ1 260 aaPredicted RBP25.09■■□□□ 1.61
TSSC4-203ENST00000380996 CRAMP1Q96RY5 1269 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms