RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 TYRO3Q06418 890 aa10.94□□□□□ -0.66
SNX1-202ENST00000380285 ANKRD44Q8N8A2 993 aa10.94□□□□□ -0.66
SNX1-202ENST00000380285 DNAI1Q9UI46 699 aa10.94□□□□□ -0.66
SNX1-202ENST00000380285 IKBKGQ9Y6K9 419 aa10.94□□□□□ -0.66
SNX1-202ENST00000380285 CAPN2P17655 700 aa10.94□□□□□ -0.66
SNX1-202ENST00000380285 SYT1P21579 422 aa10.94□□□□□ -0.66
SNX1-202ENST00000380285 USP5P45974 858 aa10.94□□□□□ -0.66
SNX1-202ENST00000380285 CCDC186Q7Z3E2 898 aa10.94□□□□□ -0.66
SNX1-202ENST00000380285 ERO1AQ96HE7 468 aa10.94□□□□□ -0.66
SNX1-202ENST00000380285 PIK3C2GO75747 1445 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 AKR1B10O60218 316 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 SDSP20132 328 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 TMEM67Q5HYA8 995 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 CCDC121Q6ZUS5 278 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 CTTNBP2Q8WZ74 1663 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 ARHGEF12Q9NZN5 1544 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 KIF4AO95239 1232 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 PDE4BQ07343 736 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 ZNF444Q8N0Y2 327 aaPredicted RBP10.93□□□□□ -0.66
SNX1-202ENST00000380285 TEX13AQ9BXU3 409 aaPredicted RBP10.93□□□□□ -0.66
SNX1-202ENST00000380285 ARHGEF11O15085 1522 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 PPP1R2P41236 205 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 CEP128Q6ZU80 1094 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 MCM10Q7L590 875 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 BRAPQ7Z569 592 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 CPLX3Q8WVH0 158 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 TMOD2Q9NZR1 351 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 POLR3AO14802 1390 aaPredicted RBP10.93□□□□□ -0.66
SNX1-202ENST00000380285 LAMC3Q9Y6N6 1575 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 CTNNA2P26232 953 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 TFIP11Q9UBB9 837 aaKnown RBP10.93□□□□□ -0.66
SNX1-202ENST00000380285 NOP2P46087 812 aaKnown RBP10.93□□□□□ -0.66
SNX1-202ENST00000380285 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
SNX1-202ENST00000380285 CFAP43Q8NDM7 1665 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 MPHOSPH10O00566 681 aaKnown RBP10.93□□□□□ -0.66
SNX1-202ENST00000380285 PSMA7O14818 248 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 TRIM47Q96LD4 638 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 GDPD2Q9HCC8 539 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 RAD50Q92878 1312 aa10.93□□□□□ -0.66
SNX1-202ENST00000380285 MFSD6Q6ZSS7 791 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 OTUD6BQ8N6M0 293 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 BICDL2A1A5D9 508 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 CCDC96Q2M329 555 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 PROSER2Q86WR7 435 aaPredicted RBP10.92□□□□□ -0.66
SNX1-202ENST00000380285 POLR3DP05423 398 aaPredicted RBP10.92□□□□□ -0.66
SNX1-202ENST00000380285 KIF5AQ12840 1032 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 CCDC50Q8IVM0 306 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 RASSF4Q9H2L5 321 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 RTL1A6NKG5 1358 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 MINDY4BA8MYZ0 360 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 MYO1BO43795 1136 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 UBE4AQ14139 1066 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 FBF1Q8TES7 1133 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 CTNNBL1Q8WYA6 563 aaPredicted RBP10.92□□□□□ -0.66
SNX1-202ENST00000380285 UQCRFS1P1P0C7P4 283 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 GNAQP50148 359 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 PDE1AP54750 535 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 CNGA4Q8IV77 575 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 ERMNQ8TAM6 284 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 BIN1O00499 593 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 CCT2P78371 535 aaKnown RBP10.92□□□□□ -0.66
SNX1-202ENST00000380285 ABCF2Q9UG63 623 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 RSPH14Q9UHP6 348 aa10.92□□□□□ -0.66
SNX1-202ENST00000380285 FERP16591 822 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 ACTN2P35609 894 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 VAV2P52735 878 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 TRIM14Q14142 442 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 TSNARE1Q96NA8 513 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 HOMER2Q9NSB8 354 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 MAPKBP1O60336 1514 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 PRIM1P49642 420 aaKnown RBP10.91□□□□□ -0.66
SNX1-202ENST00000380285 CFAP57Q96MR6 1250 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 CNPY2Q9Y2B0 182 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 ATP2A1O14983 1001 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 GUCY1B3Q02153 619 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 MCM6Q14566 821 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 SPTY2D1Q68D10 685 aaPredicted RBP10.91□□□□□ -0.66
SNX1-202ENST00000380285 JAKMIP2Q96AA8 810 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 MYD88Q99836 296 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 FAM177BA6PVY3 158 aa10.91□□□□□ -0.66
SNX1-202ENST00000380285 IRX3P78415 501 aaPredicted RBP10.91□□□□□ -0.66
SNX1-202ENST00000380285 DDX46Q7L014 1031 aaKnown RBP10.91□□□□□ -0.66
SNX1-202ENST00000380285 DZIP1Q86YF9 867 aaKnown RBP10.91□□□□□ -0.66
SNX1-202ENST00000380285 A0A1W2PRG0 241 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 PPP1R42Q7Z4L9 355 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 POTEDQ86YR6 584 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 IPO4Q8TEX9 1081 aaKnown RBP10.9□□□□□ -0.66
SNX1-202ENST00000380285 RSRC1Q96IZ7 334 aaKnown RBP10.9□□□□□ -0.66
SNX1-202ENST00000380285 IMPACTQ9P2X3 320 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 A0A1B0GUL7 405 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 CROCCP2Q86T23 111 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 RANBP6O60518 1105 aaKnown RBP10.9□□□□□ -0.66
SNX1-202ENST00000380285 LDHCP07864 332 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 CCDC6Q16204 474 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 DACT1Q9NYF0 836 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 SWAP70Q9UH65 585 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 FAM76AQ8TAV0 307 aa10.9□□□□□ -0.66
SNX1-202ENST00000380285 RHPN1Q8TCX5 695 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms