RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 ABCA10Q8WWZ4 1543 aa9.83□□□□□ -0.84
NHLRC3-201ENST00000379599 CCDC151A5D8V7 595 aa9.83□□□□□ -0.84
NHLRC3-201ENST00000379599 MAP2K7O14733 419 aa9.83□□□□□ -0.84
NHLRC3-201ENST00000379599 RPS6KA3P51812 740 aa9.83□□□□□ -0.84
NHLRC3-201ENST00000379599 PREPLQ4J6C6 727 aaPredicted RBP9.83□□□□□ -0.84
NHLRC3-201ENST00000379599 AFAP1L1Q8TED9 768 aa9.83□□□□□ -0.84
NHLRC3-201ENST00000379599 GOLGA1Q92805 767 aa9.83□□□□□ -0.84
NHLRC3-201ENST00000379599 PHLPP2Q6ZVD8 1323 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 PSDA5PKW4 1024 aaPredicted RBP9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 TUBB4AP04350 444 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 GBP2P32456 591 aaPredicted RBP9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 MTA1Q13330 715 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 SIRT2Q8IXJ6 389 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 RABGGTAQ92696 567 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 ZNF777Q9ULD5 760 aaPredicted RBP9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 TTC41PQ6P2S7 1318 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 ERLIN1O75477 346 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 KIAA0754O94854 1291 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 ECEL1O95672 775 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 RPSAP08865 295 aaKnown RBP9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 BRD3Q15059 726 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 C1QTNF12Q5T7M4 302 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 VPS53Q5VIR6 699 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 TMC6Q7Z403 805 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 FAM71BQ8TC56 605 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 BICD2Q8TD16 824 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 SPDL1Q96EA4 605 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 STAG3Q9UJ98 1225 aa9.82□□□□□ -0.84
NHLRC3-201ENST00000379599 CCP110O43303 1012 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 COQ9O75208 318 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 ZBTB7BO15156 539 aaPredicted RBP9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 TXLNAP40222 546 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 FAM173BQ6P4H8 233 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 SMARCC1Q92922 1105 aaPredicted RBP9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 CCDC97Q96F63 343 aaPredicted RBP9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 PARP3Q9Y6F1 533 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 SNAPC4Q5SXM2 1469 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 ARHGEF12Q9NZN5 1544 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 GNG11P61952 73 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 CEP85LQ5SZL2 805 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 TTC6Q86TZ1 520 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 ABCC5O15440 1437 aa9.81□□□□□ -0.84
NHLRC3-201ENST00000379599 ANKRD18BA2A2Z9 1011 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 RTN2O75298 545 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 U2AF1L5P0DN76 240 aaPredicted RBP9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 KRT85P78386 507 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 U2AF1Q01081 240 aaKnown RBP eCLIP9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 DDR1Q08345 913 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 TEX13AQ9BXU3 409 aaPredicted RBP9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 GOPCQ9HD26 462 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 TFIP11Q9UBB9 837 aaKnown RBP9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 SAMM50Q9Y512 469 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 ASXL1Q8IXJ9 1541 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 SHTN1A0MZ66 631 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 PLEKHD1A6NEE1 506 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 EZRP15311 586 aaKnown RBP9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 SPDYE1Q8NFV5 336 aaPredicted RBP9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 SAAL1Q96ER3 474 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 PRAM1Q96QH2 718 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 PICK1Q9NRD5 415 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 A0A087WWV3 80 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 TMCO5BA8MYB1 307 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 RNF40O75150 1001 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 CDR1P51861 262 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 E2F5Q15329 346 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 SARM1Q6SZW1 724 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 C11orf57Q6ZUT1 292 aaPredicted RBP9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 NUTM1Q86Y26 1132 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 CEP112Q8N8E3 955 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 CRACR2AQ9BSW2 395 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 NAT10Q9H0A0 1025 aaKnown RBP9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 ABCB6Q9NP58 842 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 KCND1Q9NSA2 647 aa9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 DDX19AQ9NUU7 478 aaKnown RBP9.8□□□□□ -0.84
NHLRC3-201ENST00000379599 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 PYGLP06737 847 aa9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 MRPL12P52815 198 aaKnown RBP9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 BEND6Q5SZJ8 279 aaPredicted RBP9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 DNAJC14Q6Y2X3 702 aaPredicted RBP9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 C3orf20Q8ND61 904 aa9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 BCAS4Q8TDM0 211 aa9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 PUF60Q9UHX1 559 aaKnown RBP9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 SSBP05455 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 TBC1D25Q3MII6 688 aa9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 ANKRD23Q86SG2 305 aa9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 CCDC150Q8NCX0 1101 aa9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 SCLT1Q96NL6 688 aa9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 CLSTN2Q9H4D0 955 aa9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 ATAD2Q6PL18 1390 aa9.79□□□□□ -0.84
NHLRC3-201ENST00000379599 PECAM1P16284 738 aaPredicted RBP9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 CASP8Q14790 479 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 PDCD2Q16342 344 aaPredicted RBP9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 CCDC181Q5TID7 509 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 KIAA1328Q86T90 577 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 PHF23Q9BUL5 403 aaPredicted RBP9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 MIS18AQ9NYP9 233 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 WDR7Q9Y4E6 1490 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 PRAG1Q86YV5 1406 aa9.78□□□□□ -0.84
NHLRC3-201ENST00000379599 IFIT2P09913 472 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms