RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 LTBP1Q14766 1721 aa13.15□□□□□ -0.3
SEC23B-203ENST00000377465 RPS6KA4O75676 772 aa13.15□□□□□ -0.3
SEC23B-203ENST00000377465 MCM4P33991 863 aa13.15□□□□□ -0.3
SEC23B-203ENST00000377465 ZNF609O15014 1411 aa13.15□□□□□ -0.3
SEC23B-203ENST00000377465 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.3
SEC23B-203ENST00000377465 KCNQ2O43526 872 aa13.15□□□□□ -0.31
SEC23B-203ENST00000377465 UPF2Q9HAU5 1272 aaKnown RBP13.15□□□□□ -0.31
SEC23B-203ENST00000377465 FAM13BQ9NYF5 915 aa13.15□□□□□ -0.31
SEC23B-203ENST00000377465 ISY1Q9ULR0 285 aaKnown RBP13.15□□□□□ -0.31
SEC23B-203ENST00000377465 MYH7P12883 1935 aa13.14□□□□□ -0.31
SEC23B-203ENST00000377465 SRGAP3O43295 1099 aa13.14□□□□□ -0.31
SEC23B-203ENST00000377465 GSPT1P15170 499 aaKnown RBP13.14□□□□□ -0.31
SEC23B-203ENST00000377465 NCLP19338 710 aaKnown RBP13.14□□□□□ -0.31
SEC23B-203ENST00000377465 PTPN12Q05209 780 aaKnown RBP13.14□□□□□ -0.31
SEC23B-203ENST00000377465 UTP14CQ5TAP6 766 aaKnown RBP13.14□□□□□ -0.31
SEC23B-203ENST00000377465 RHPN1Q8TCX5 695 aa13.14□□□□□ -0.31
SEC23B-203ENST00000377465 PLSCR1O15162 318 aa13.14□□□□□ -0.31
SEC23B-203ENST00000377465 OFD1O75665 1012 aa13.14□□□□□ -0.31
SEC23B-203ENST00000377465 EPHA10Q5JZY3 1008 aa13.14□□□□□ -0.31
SEC23B-203ENST00000377465 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
SEC23B-203ENST00000377465 SNRKQ9NRH2 765 aa13.14□□□□□ -0.31
SEC23B-203ENST00000377465 DLEC1Q9Y238 1755 aa13.13□□□□□ -0.31
SEC23B-203ENST00000377465 PDE1AP54750 535 aa13.13□□□□□ -0.31
SEC23B-203ENST00000377465 AIMP1Q12904 312 aaKnown RBP13.13□□□□□ -0.31
SEC23B-203ENST00000377465 CCDC9Q9Y3X0 531 aaKnown RBP13.13□□□□□ -0.31
SEC23B-203ENST00000377465 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
SEC23B-203ENST00000377465 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.13□□□□□ -0.31
SEC23B-203ENST00000377465 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
SEC23B-203ENST00000377465 TRAK2O60296 914 aa13.13□□□□□ -0.31
SEC23B-203ENST00000377465 KRT27Q7Z3Y8 459 aa13.13□□□□□ -0.31
SEC23B-203ENST00000377465 DZIP3Q86Y13 1208 aaKnown RBP13.13□□□□□ -0.31
SEC23B-203ENST00000377465 PI4K2BQ8TCG2 481 aa13.13□□□□□ -0.31
SEC23B-203ENST00000377465 DUOX1Q9NRD9 1551 aa13.12□□□□□ -0.31
SEC23B-203ENST00000377465 HSP90B1P14625 803 aaKnown RBP13.12□□□□□ -0.31
SEC23B-203ENST00000377465 AKAP11Q9UKA4 1901 aa13.12□□□□□ -0.31
SEC23B-203ENST00000377465 NARFQ9UHQ1 456 aa13.12□□□□□ -0.31
SEC23B-203ENST00000377465 KIF13BQ9NQT8 1826 aa13.12□□□□□ -0.31
SEC23B-203ENST00000377465 DMTNQ08495 405 aa13.11□□□□□ -0.31
SEC23B-203ENST00000377465 HLFQ16534 295 aa13.11□□□□□ -0.31
SEC23B-203ENST00000377465 MAST2Q6P0Q8 1798 aa13.11□□□□□ -0.31
SEC23B-203ENST00000377465 SASH1O94885 1247 aa13.11□□□□□ -0.31
SEC23B-203ENST00000377465 NTSR2O95665 410 aa13.11□□□□□ -0.31
SEC23B-203ENST00000377465 RBM25P49756 843 aaKnown RBP13.11□□□□□ -0.31
SEC23B-203ENST00000377465 MTERF4Q7Z6M4 381 aaKnown RBP13.11□□□□□ -0.31
SEC23B-203ENST00000377465 ACSBG1Q96GR2 724 aa13.11□□□□□ -0.31
SEC23B-203ENST00000377465 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.11□□□□□ -0.31
SEC23B-203ENST00000377465 ANKRD31Q8N7Z5 1873 aa13.1□□□□□ -0.31
SEC23B-203ENST00000377465 MX1P20591 662 aa13.1□□□□□ -0.31
SEC23B-203ENST00000377465 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
SEC23B-203ENST00000377465 ATG9AQ7Z3C6 839 aa13.1□□□□□ -0.31
SEC23B-203ENST00000377465 ZNF512BQ96KM6 892 aaPredicted RBP13.1□□□□□ -0.31
SEC23B-203ENST00000377465 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
SEC23B-203ENST00000377465 TBC1D32Q96NH3 1257 aa13.09□□□□□ -0.31
SEC23B-203ENST00000377465 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
SEC23B-203ENST00000377465 PRDM10Q9NQV6 1147 aa13.09□□□□□ -0.31
SEC23B-203ENST00000377465 CDC45O75419 566 aa13.09□□□□□ -0.31
SEC23B-203ENST00000377465 RGS17Q9UGC6 210 aaPredicted RBP13.09□□□□□ -0.31
SEC23B-203ENST00000377465 PDE8AO60658 829 aa13.09□□□□□ -0.31
SEC23B-203ENST00000377465 UBE3BQ7Z3V4 1068 aa13.09□□□□□ -0.31
SEC23B-203ENST00000377465 EXOC6BQ9Y2D4 811 aa13.09□□□□□ -0.31
SEC23B-203ENST00000377465 SSFA2P28290 1259 aa13.08□□□□□ -0.32
SEC23B-203ENST00000377465 PIP4K2AP48426 406 aaPredicted RBP13.08□□□□□ -0.32
SEC23B-203ENST00000377465 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
SEC23B-203ENST00000377465 COL4A1P02462 1669 aa13.08□□□□□ -0.32
SEC23B-203ENST00000377465 SURF6O75683 361 aaKnown RBP13.08□□□□□ -0.32
SEC23B-203ENST00000377465 IL15P40933 162 aaPredicted RBP13.08□□□□□ -0.32
SEC23B-203ENST00000377465 CTSWP56202 376 aa13.07□□□□□ -0.32
SEC23B-203ENST00000377465 ZSCAN30Q86W11 494 aa13.07□□□□□ -0.32
SEC23B-203ENST00000377465 LAMA4Q16363 1823 aa13.07□□□□□ -0.32
SEC23B-203ENST00000377465 SF3B3Q15393 1217 aaKnown RBP13.07□□□□□ -0.32
SEC23B-203ENST00000377465 PTF1AQ7RTS3 328 aa13.07□□□□□ -0.32
SEC23B-203ENST00000377465 SYTL4Q96C24 671 aaPredicted RBP13.07□□□□□ -0.32
SEC23B-203ENST00000377465 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
SEC23B-203ENST00000377465 SMARCA5O60264 1052 aaPredicted RBP13.06□□□□□ -0.32
SEC23B-203ENST00000377465 VGLL2Q8N8G2 317 aa13.06□□□□□ -0.32
SEC23B-203ENST00000377465 TTLL11Q8NHH1 800 aa13.06□□□□□ -0.32
SEC23B-203ENST00000377465 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
SEC23B-203ENST00000377465 EYA2O00167 538 aa13.06□□□□□ -0.32
SEC23B-203ENST00000377465 C16orf71Q8IYS4 520 aaPredicted RBP13.06□□□□□ -0.32
SEC23B-203ENST00000377465 GLRX3O76003 335 aaKnown RBP13.05□□□□□ -0.32
SEC23B-203ENST00000377465 OTUD7AQ8TE49 926 aaPredicted RBP13.05□□□□□ -0.32
SEC23B-203ENST00000377465 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
SEC23B-203ENST00000377465 ZNF646O15015 1829 aaPredicted RBP13.05□□□□□ -0.32
SEC23B-203ENST00000377465 ZSCAN20P17040 1043 aaPredicted RBP13.05□□□□□ -0.32
SEC23B-203ENST00000377465 SDSP20132 328 aa13.05□□□□□ -0.32
SEC23B-203ENST00000377465 PPP4R3BQ5MIZ7 849 aa13.05□□□□□ -0.32
SEC23B-203ENST00000377465 UTP14AQ9BVJ6 771 aaKnown RBP13.05□□□□□ -0.32
SEC23B-203ENST00000377465 SH3TC1Q8TE82 1336 aa13.05□□□□□ -0.32
SEC23B-203ENST00000377465 ATP5JP18859 108 aa13.05□□□□□ -0.32
SEC23B-203ENST00000377465 G3BP1Q13283 466 aaKnown RBP eCLIP13.05□□□□□ -0.322e-6■■■■□ 22
SEC23B-203ENST00000377465 LMBR1LQ6UX01 489 aa13.05□□□□□ -0.32
SEC23B-203ENST00000377465 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
SEC23B-203ENST00000377465 CLASRPQ8N2M8 674 aaKnown RBP13.05□□□□□ -0.32
SEC23B-203ENST00000377465 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
SEC23B-203ENST00000377465 KAT6BQ8WYB5 2073 aa13.05□□□□□ -0.32
SEC23B-203ENST00000377465 IGSF3O75054 1194 aa13.04□□□□□ -0.32
SEC23B-203ENST00000377465 TNNI3KQ59H18 835 aa13.04□□□□□ -0.32
SEC23B-203ENST00000377465 SUSD4Q5VX71 490 aa13.04□□□□□ -0.32
SEC23B-203ENST00000377465 NYXQ9GZU5 481 aa13.04□□□□□ -0.32
SEC23B-203ENST00000377465 R3HCC1Q9Y3T6 440 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms