RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 TPM3P06753 285 aa12.03□□□□□ -0.48
USP11-203ENST00000377080 SYT1P21579 422 aa12.03□□□□□ -0.48
USP11-203ENST00000377080 RNF20Q5VTR2 975 aa12.03□□□□□ -0.48
USP11-203ENST00000377080 RUFY3Q7L099 469 aa12.03□□□□□ -0.48
USP11-203ENST00000377080 RASEFQ8IZ41 740 aa12.03□□□□□ -0.48
USP11-203ENST00000377080 UPF3BQ9BZI7 483 aaKnown RBP12.03□□□□□ -0.48
USP11-203ENST00000377080 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
USP11-203ENST00000377080 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
USP11-203ENST00000377080 CPDO75976 1380 aa12.03□□□□□ -0.48
USP11-203ENST00000377080 G3BP1Q13283 466 aaKnown RBP eCLIP12.02□□□□□ -0.493e-6■■■□□ 15.1
USP11-203ENST00000377080 OS9Q13438 667 aaPredicted RBP12.02□□□□□ -0.49
USP11-203ENST00000377080 CWC27Q6UX04 472 aaKnown RBP12.02□□□□□ -0.49
USP11-203ENST00000377080 UBE2Q2Q8WVN8 375 aa12.02□□□□□ -0.49
USP11-203ENST00000377080 MAP7D2Q96T17 732 aa12.02□□□□□ -0.49
USP11-203ENST00000377080 IL25Q9H293 177 aa12.02□□□□□ -0.49
USP11-203ENST00000377080 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
USP11-203ENST00000377080 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.02□□□□□ -0.49
USP11-203ENST00000377080 ELP1O95163 1332 aa12.02□□□□□ -0.49
USP11-203ENST00000377080 SHANK3Q9BYB0 1731 aa12.02□□□□□ -0.49
USP11-203ENST00000377080 WNK3Q9BYP7 1800 aa12.02□□□□□ -0.49
USP11-203ENST00000377080 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.49
USP11-203ENST00000377080 ZBTB7CA1YPR0 619 aa12.01□□□□□ -0.49
USP11-203ENST00000377080 KCNQ3O43525 872 aa12.01□□□□□ -0.49
USP11-203ENST00000377080 KRT32Q14532 448 aa12.01□□□□□ -0.49
USP11-203ENST00000377080 GPR162Q16538 588 aa12.01□□□□□ -0.49
USP11-203ENST00000377080 USHBP1Q8N6Y0 703 aa12.01□□□□□ -0.49
USP11-203ENST00000377080 COPRSQ9NQ92 184 aa12.01□□□□□ -0.49
USP11-203ENST00000377080 NEXNQ0ZGT2 675 aa12□□□□□ -0.49
USP11-203ENST00000377080 PDIA6Q15084 440 aa12□□□□□ -0.49
USP11-203ENST00000377080 GLIPR1L2Q4G1C9 344 aa12□□□□□ -0.49
USP11-203ENST00000377080 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
USP11-203ENST00000377080 MPRIPQ6WCQ1 1025 aa12□□□□□ -0.49
USP11-203ENST00000377080 MTERF4Q7Z6M4 381 aaKnown RBP12□□□□□ -0.49
USP11-203ENST00000377080 ANKRD24Q8TF21 1146 aa12□□□□□ -0.49
USP11-203ENST00000377080 CHMP4CQ96CF2 233 aa12□□□□□ -0.49
USP11-203ENST00000377080 MTFR1LQ9H019 292 aa12□□□□□ -0.49
USP11-203ENST00000377080 STK32BQ9NY57 414 aa12□□□□□ -0.49
USP11-203ENST00000377080 MTMR6Q9Y217 621 aa12□□□□□ -0.49
USP11-203ENST00000377080 RGPD5Q99666 1765 aa12□□□□□ -0.49
USP11-203ENST00000377080 SASH1O94885 1247 aa11.99□□□□□ -0.49
USP11-203ENST00000377080 CASTP20810 708 aaKnown RBP11.99□□□□□ -0.49
USP11-203ENST00000377080 AACSQ86V21 672 aa11.99□□□□□ -0.49
USP11-203ENST00000377080 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
USP11-203ENST00000377080 METTL22Q9BUU2 404 aaPredicted RBP11.99□□□□□ -0.49
USP11-203ENST00000377080 PDCL3Q9H2J4 239 aa11.99□□□□□ -0.49
USP11-203ENST00000377080 COL18A1P39060 1754 aa11.99□□□□□ -0.49
USP11-203ENST00000377080 MED23Q9ULK4 1368 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 CAVIN2O95810 425 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 ATP5JP18859 108 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 PTH1RQ03431 593 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 HSP90AA2PQ14568 343 aaPredicted RBP11.98□□□□□ -0.49
USP11-203ENST00000377080 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
USP11-203ENST00000377080 CREB3L3Q68CJ9 461 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 PROM2Q8N271 834 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 EAF2Q96CJ1 260 aaPredicted RBP11.98□□□□□ -0.49
USP11-203ENST00000377080 JAKMIP1Q96N16 626 aaKnown RBP11.98□□□□□ -0.49
USP11-203ENST00000377080 SGIP1Q9BQI5 828 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 FUCA2Q9BTY2 467 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 USP25Q9UHP3 1055 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 SPG7Q9UQ90 795 aa11.98□□□□□ -0.49
USP11-203ENST00000377080 THRAP3Q9Y2W1 955 aaKnown RBP11.98□□□□□ -0.49
USP11-203ENST00000377080 GADD45BO75293 160 aaPredicted RBP11.97□□□□□ -0.49
USP11-203ENST00000377080 GJB2P29033 226 aa11.97□□□□□ -0.49
USP11-203ENST00000377080 GCKRQ14397 625 aa11.97□□□□□ -0.49
USP11-203ENST00000377080 SLC15A2Q16348 729 aa11.97□□□□□ -0.49
USP11-203ENST00000377080 ZNF790Q6PG37 636 aa11.97□□□□□ -0.49
USP11-203ENST00000377080 SUCLG2Q96I99 432 aa11.97□□□□□ -0.49
USP11-203ENST00000377080 SCAND2PQ9GZW5 306 aaPredicted RBP11.97□□□□□ -0.49
USP11-203ENST00000377080 SLC52A2Q9HAB3 445 aa11.97□□□□□ -0.49
USP11-203ENST00000377080 RBM8AQ9Y5S9 174 aaKnown RBP11.97□□□□□ -0.49
USP11-203ENST00000377080 GOLGB1Q14789 3259 aaKnown RBP11.97□□□□□ -0.49
USP11-203ENST00000377080 NEURL1BA8MQ27 555 aa11.96□□□□□ -0.49
USP11-203ENST00000377080 SLC27A2O14975 620 aa11.96□□□□□ -0.49
USP11-203ENST00000377080 KDM4AO75164 1064 aa11.96□□□□□ -0.49
USP11-203ENST00000377080 KRT85P78386 507 aa11.96□□□□□ -0.49
USP11-203ENST00000377080 PRPF40BQ6NWY9 871 aaKnown RBP11.96□□□□□ -0.49
USP11-203ENST00000377080 BLOC1S2Q6QNY1 142 aa11.96□□□□□ -0.49
USP11-203ENST00000377080 PTF1AQ7RTS3 328 aa11.96□□□□□ -0.49
USP11-203ENST00000377080 RGS22Q8NE09 1264 aa11.96□□□□□ -0.49
USP11-203ENST00000377080 GPR108Q9NPR9 543 aa11.96□□□□□ -0.49
USP11-203ENST00000377080 CNPY2Q9Y2B0 182 aa11.96□□□□□ -0.49
USP11-203ENST00000377080 PKD1L3Q7Z443 1732 aa11.95□□□□□ -0.5
USP11-203ENST00000377080 ERBB3P21860 1342 aa11.95□□□□□ -0.5
USP11-203ENST00000377080 DYNC1I1O14576 645 aa11.95□□□□□ -0.5
USP11-203ENST00000377080 MAP4K4O95819 1239 aaPredicted RBP11.95□□□□□ -0.5
USP11-203ENST00000377080 IGKV5-2P06315 115 aa11.95□□□□□ -0.5
USP11-203ENST00000377080 HMGB1P09429 215 aaKnown RBP11.95□□□□□ -0.5
USP11-203ENST00000377080 SNRPA1P09661 255 aaKnown RBP11.95□□□□□ -0.5
USP11-203ENST00000377080 RPS6KB1P23443 525 aa11.95□□□□□ -0.5
USP11-203ENST00000377080 KIAA2012Q0VF49 1180 aa11.95□□□□□ -0.5
USP11-203ENST00000377080 NMIQ13287 307 aaPredicted RBP11.95□□□□□ -0.5
USP11-203ENST00000377080 ME3Q16798 604 aa11.95□□□□□ -0.5
USP11-203ENST00000377080 PROSER3Q2NL68 480 aa11.95□□□□□ -0.5
USP11-203ENST00000377080 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
USP11-203ENST00000377080 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
USP11-203ENST00000377080 BICC1Q9H694 974 aaKnown RBP11.95□□□□□ -0.5
USP11-203ENST00000377080 U3KPZ7 1027 aaPredicted RBP11.95□□□□□ -0.5
USP11-203ENST00000377080 CCDC192P0DO97 292 aa11.94□□□□□ -0.5
USP11-203ENST00000377080 TATP17735 454 aaPredicted RBP11.94□□□□□ -0.5
USP11-203ENST00000377080 HMGN5P82970 282 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms