RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 ARSJQ5FYB0 599 aaPredicted RBP8.29□□□□□ -1.08
SSX3-203ENST00000376895 C6orf118Q5T5N4 469 aa8.29□□□□□ -1.08
SSX3-203ENST00000376895 MRPL14Q6P1L8 145 aaKnown RBP8.29□□□□□ -1.08
SSX3-203ENST00000376895 PRICKLE2Q7Z3G6 844 aa8.29□□□□□ -1.08
SSX3-203ENST00000376895 SNX29Q8TEQ0 813 aa8.29□□□□□ -1.08
SSX3-203ENST00000376895 C7orf43Q8WVR3 580 aa8.29□□□□□ -1.08
SSX3-203ENST00000376895 METTL5Q9NRN9 209 aaKnown RBP8.29□□□□□ -1.08
SSX3-203ENST00000376895 RNF19AQ9NV58 838 aa8.29□□□□□ -1.08
SSX3-203ENST00000376895 DMGDHQ9UI17 866 aaKnown RBP8.29□□□□□ -1.08
SSX3-203ENST00000376895 SPG7Q9UQ90 795 aa8.29□□□□□ -1.08
SSX3-203ENST00000376895 UGGT2Q9NYU1 1516 aa8.29□□□□□ -1.08
SSX3-203ENST00000376895 CTTNBP2Q8WZ74 1663 aa8.28□□□□□ -1.08
SSX3-203ENST00000376895 PDE12Q6L8Q7 609 aaKnown RBP8.28□□□□□ -1.08
SSX3-203ENST00000376895 BTLAQ7Z6A9 289 aa8.28□□□□□ -1.08
SSX3-203ENST00000376895 CRELD1Q96HD1 420 aa8.28□□□□□ -1.08
SSX3-203ENST00000376895 CFHR5Q9BXR6 569 aa8.28□□□□□ -1.08
SSX3-203ENST00000376895 OPLAHO14841 1288 aa8.27□□□□□ -1.09
SSX3-203ENST00000376895 LDLRAD1Q5T700 205 aa8.27□□□□□ -1.09
SSX3-203ENST00000376895 ZNF438Q7Z4V0 828 aa8.27□□□□□ -1.09
SSX3-203ENST00000376895 SREK1Q8WXA9 508 aaKnown RBP8.27□□□□□ -1.09
SSX3-203ENST00000376895 TIMMDC1Q9NPL8 285 aa8.27□□□□□ -1.09
SSX3-203ENST00000376895 GJA3Q9Y6H8 435 aa8.27□□□□□ -1.09
SSX3-203ENST00000376895 EFCAB5A4FU69 1503 aa8.27□□□□□ -1.09
SSX3-203ENST00000376895 CLASP1Q7Z460 1538 aa8.27□□□□□ -1.09
SSX3-203ENST00000376895 PTPRGP23470 1445 aa8.27□□□□□ -1.09
SSX3-203ENST00000376895 ARHGAP35Q9NRY4 1499 aa8.26□□□□□ -1.09
SSX3-203ENST00000376895 INPP5BP32019 993 aa8.26□□□□□ -1.09
SSX3-203ENST00000376895 SCARF1Q14162 830 aa8.26□□□□□ -1.09
SSX3-203ENST00000376895 TRIP4Q15650 581 aaPredicted RBP8.26□□□□□ -1.09
SSX3-203ENST00000376895 NAALADL2Q58DX5 795 aa8.26□□□□□ -1.09
SSX3-203ENST00000376895 LRRC69Q6ZNQ3 347 aa8.26□□□□□ -1.09
SSX3-203ENST00000376895 CMTR1Q8N1G2 835 aaKnown RBP8.26□□□□□ -1.09
SSX3-203ENST00000376895 KLRG1Q96E93 195 aa8.26□□□□□ -1.09
SSX3-203ENST00000376895 ZIC5Q96T25 663 aa8.26□□□□□ -1.09
SSX3-203ENST00000376895 RTCBQ9Y3I0 505 aaKnown RBP8.26□□□□□ -1.09
SSX3-203ENST00000376895 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 UBAP1LF5GYI3 381 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 TNFRSF21O75509 655 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 RHOQP17081 205 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 MSX1P28360 303 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 ZNF76P36508 570 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 FANCCQ00597 558 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 TYRO3Q06418 890 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 XKR5Q6UX68 686 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 RNF34Q969K3 372 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 FOXD3Q9UJU5 478 aaPredicted RBP8.25□□□□□ -1.09
SSX3-203ENST00000376895 AK5Q9Y6K8 562 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 FHOD3Q2V2M9 1422 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 FMN1Q68DA7 1419 aa8.25□□□□□ -1.09
SSX3-203ENST00000376895 DISP1Q96F81 1524 aa8.24□□□□□ -1.09
SSX3-203ENST00000376895 PHACTR2O75167 634 aa8.24□□□□□ -1.09
SSX3-203ENST00000376895 EIF4BP23588 611 aaKnown RBP8.24□□□□□ -1.09
SSX3-203ENST00000376895 SF3A1Q15459 793 aaKnown RBP8.24□□□□□ -1.09
SSX3-203ENST00000376895 NT5DC4Q86YG4 428 aa8.24□□□□□ -1.09
SSX3-203ENST00000376895 USP20Q9Y2K6 914 aa8.24□□□□□ -1.09
SSX3-203ENST00000376895 A0A1W2PNR3 127 aa8.23□□□□□ -1.09
SSX3-203ENST00000376895 C9orf131Q5VYM1 1079 aa8.23□□□□□ -1.09
SSX3-203ENST00000376895 DRC1Q96MC2 740 aa8.23□□□□□ -1.09
SSX3-203ENST00000376895 CRISPLD1Q9H336 500 aa8.23□□□□□ -1.09
SSX3-203ENST00000376895 NLRP2Q9NX02 1062 aa8.23□□□□□ -1.09
SSX3-203ENST00000376895 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
SSX3-203ENST00000376895 ARAP1Q96P48 1450 aa8.23□□□□□ -1.09
SSX3-203ENST00000376895 VPS8Q8N3P4 1428 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 FAM187AA6NFU0 413 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 GIPC1O14908 333 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 BMP1P13497 986 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 RAD51AP2Q09MP3 1159 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.22□□□□□ -1.09
SSX3-203ENST00000376895 CYB5RLQ6IPT4 315 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 METTL16Q86W50 562 aaKnown RBP8.22□□□□□ -1.09
SSX3-203ENST00000376895 PGBD3Q8N328 593 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 CCDC74AQ96AQ1 378 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 CEP63Q96MT8 703 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 C12orf49Q9H741 205 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 ELP3Q9H9T3 547 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 GPAMQ9HCL2 828 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 SAMD9Q5K651 1589 aa8.22□□□□□ -1.09
SSX3-203ENST00000376895 SHROOM2Q13796 1616 aa8.21□□□□□ -1.09
SSX3-203ENST00000376895 TGIF2Q9GZN2 237 aa8.21□□□□□ -1.1
SSX3-203ENST00000376895 CCSER2Q9H7U1 834 aa8.21□□□□□ -1.1
SSX3-203ENST00000376895 BRD7Q9NPI1 651 aa8.21□□□□□ -1.1
SSX3-203ENST00000376895 TMEM63CQ9P1W3 806 aa8.21□□□□□ -1.1
SSX3-203ENST00000376895 PDZRN3Q9UPQ7 1066 aa8.21□□□□□ -1.1
SSX3-203ENST00000376895 CDK11AQ9UQ88 783 aaPredicted RBP8.21□□□□□ -1.1
SSX3-203ENST00000376895 SOS2Q07890 1332 aaPredicted RBP8.21□□□□□ -1.1
SSX3-203ENST00000376895 KIAA0556O60303 1618 aa8.21□□□□□ -1.1
SSX3-203ENST00000376895 XYLBO75191 536 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 AVPP01185 164 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 SAMD5Q5TGI4 173 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 USPL1Q5W0Q7 1092 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 NLRP8Q86W28 1048 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 RUBCNLQ9H714 662 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 ZFYVE28Q9HCC9 887 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 NPHS2Q9NP85 383 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 C11orf16Q9NQ32 467 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 DYRK1BQ9Y463 629 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 RIMBP3CA6NJZ7 1639 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 RIMBP3BA6NNM3 1639 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 RIMBP3Q9UFD9 1639 aa8.2□□□□□ -1.1
SSX3-203ENST00000376895 FIGNL2A6NMB9 653 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms