RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 DDX60Q8IY21 1712 aaKnown RBP34.37■■■■□ 3.09
COMMD3-201ENST00000376836 BRPF1P55201 1214 aaPredicted RBP34.36■■■■□ 3.09
COMMD3-201ENST00000376836 NOB1Q9ULX3 412 aaKnown RBP34.36■■■■□ 3.09
COMMD3-201ENST00000376836 TMC4Q7Z404 712 aa34.35■■■■□ 3.09
COMMD3-201ENST00000376836 C9orf78Q9NZ63 289 aaPredicted RBP34.35■■■■□ 3.09
COMMD3-201ENST00000376836 LTBP3Q9NS15 1303 aa34.34■■■■□ 3.09
COMMD3-201ENST00000376836 KIF16BQ96L93 1317 aa34.33■■■■□ 3.09
COMMD3-201ENST00000376836 CTSWP56202 376 aa34.33■■■■□ 3.09
COMMD3-201ENST00000376836 API5Q9BZZ5 524 aaKnown RBP34.33■■■■□ 3.09
COMMD3-201ENST00000376836 ATP6V0A2Q9Y487 856 aa34.33■■■■□ 3.09
COMMD3-201ENST00000376836 LAMB2P55268 1798 aa34.33■■■■□ 3.09
COMMD3-201ENST00000376836 FKBP4Q02790 459 aaKnown RBP eCLIP34.32■■■■□ 3.09
COMMD3-201ENST00000376836 OLFM4Q6UX06 510 aa34.32■■■■□ 3.09
COMMD3-201ENST00000376836 SP8Q8IXZ3 490 aa34.31■■■■□ 3.08
COMMD3-201ENST00000376836 GRM8O00222 908 aa34.3■■■■□ 3.08
COMMD3-201ENST00000376836 IPO8O15397 1037 aaKnown RBP34.3■■■■□ 3.08
COMMD3-201ENST00000376836 CCDC85AQ96PX6 553 aaPredicted RBP34.3■■■■□ 3.08
COMMD3-201ENST00000376836 ZNF784Q8NCA9 323 aaPredicted RBP34.3■■■■□ 3.08
COMMD3-201ENST00000376836 PLA2G12BQ9BX93 195 aa34.3■■■■□ 3.08
COMMD3-201ENST00000376836 RPS8P62241 208 aaKnown RBP34.29■■■■□ 3.08
COMMD3-201ENST00000376836 CASP7P55210 303 aa34.28■■■■□ 3.08
COMMD3-201ENST00000376836 TTLL11Q8NHH1 800 aa34.28■■■■□ 3.08
COMMD3-201ENST00000376836 ARHGAP45Q92619 1136 aa34.28■■■■□ 3.08
COMMD3-201ENST00000376836 CELF1Q92879 486 aaKnown RBP34.28■■■■□ 3.08
COMMD3-201ENST00000376836 PSMD1Q99460 953 aa34.28■■■■□ 3.08
COMMD3-201ENST00000376836 CDC5LQ99459 802 aaKnown RBP34.27■■■■□ 3.08
COMMD3-201ENST00000376836 FER1L6Q2WGJ9 1857 aa34.26■■■■□ 3.08
COMMD3-201ENST00000376836 CCT4P50991 539 aaKnown RBP34.26■■■■□ 3.07
COMMD3-201ENST00000376836 SEC31BQ9NQW1 1179 aa34.26■■■■□ 3.07
COMMD3-201ENST00000376836 ZC3H4Q9UPT8 1303 aaKnown RBP34.25■■■■□ 3.07
COMMD3-201ENST00000376836 ANKRD18AQ8IVF6 992 aa34.25■■■■□ 3.07
COMMD3-201ENST00000376836 FRAT1Q92837 279 aaPredicted RBP34.25■■■■□ 3.07
COMMD3-201ENST00000376836 BCAR3O75815 825 aa34.24■■■■□ 3.07
COMMD3-201ENST00000376836 DPP8Q6V1X1 898 aaPredicted RBP34.24■■■■□ 3.07
COMMD3-201ENST00000376836 MPNDQ8N594 471 aa34.24■■■■□ 3.07
COMMD3-201ENST00000376836 SUPT20HQ8NEM7 779 aa34.24■■■■□ 3.07
COMMD3-201ENST00000376836 ZNF277Q9NRM2 450 aaPredicted RBP34.24■■■■□ 3.07
COMMD3-201ENST00000376836 PRELPP51888 382 aa34.23■■■■□ 3.07
COMMD3-201ENST00000376836 ZNF526Q8TF50 670 aaPredicted RBP34.22■■■■□ 3.07
COMMD3-201ENST00000376836 GREM2Q9H772 168 aa34.22■■■■□ 3.07
COMMD3-201ENST00000376836 RTL9Q8NET4 1388 aa34.21■■■■□ 3.07
COMMD3-201ENST00000376836 GPBP1L1Q9HC44 474 aaPredicted RBP34.21■■■■□ 3.07
COMMD3-201ENST00000376836 SBF1O95248 1867 aa34.2■■■■□ 3.07
COMMD3-201ENST00000376836 CSF1RP07333 972 aa34.2■■■■□ 3.07
COMMD3-201ENST00000376836 IARSP41252 1262 aaKnown RBP34.2■■■■□ 3.07
COMMD3-201ENST00000376836 CHMP3Q9Y3E7 222 aa34.2■■■■□ 3.07
COMMD3-201ENST00000376836 IGHMBP2P38935 993 aaKnown RBP34.18■■■■□ 3.06
COMMD3-201ENST00000376836 NSFL1CQ9UNZ2 370 aaKnown RBP34.18■■■■□ 3.06
COMMD3-201ENST00000376836 UTYO14607 1347 aa34.18■■■■□ 3.06
COMMD3-201ENST00000376836 NBPF7P0C2Y1 421 aaPredicted RBP34.17■■■■□ 3.06
COMMD3-201ENST00000376836 ITGA6P23229 1130 aa34.17■■■■□ 3.06
COMMD3-201ENST00000376836 FOXO4P98177 505 aa34.17■■■■□ 3.06
COMMD3-201ENST00000376836 DPY19L2Q6NUT2 758 aa34.17■■■■□ 3.06
COMMD3-201ENST00000376836 ATF7IPQ6VMQ6 1270 aa34.17■■■■□ 3.06
COMMD3-201ENST00000376836 JDP2Q8WYK2 163 aa34.17■■■■□ 3.06
COMMD3-201ENST00000376836 VPS33BQ9H267 617 aa34.17■■■■□ 3.06
COMMD3-201ENST00000376836 KDM2BQ8NHM5 1336 aa34.17■■■■□ 3.06
COMMD3-201ENST00000376836 SNED1Q8TER0 1413 aa34.16■■■■□ 3.06
COMMD3-201ENST00000376836 ANKRD18BA2A2Z9 1011 aa34.16■■■■□ 3.06
COMMD3-201ENST00000376836 ZKSCAN2Q63HK3 967 aa34.16■■■■□ 3.06
COMMD3-201ENST00000376836 IFIT5Q13325 482 aaKnown RBP34.15■■■■□ 3.06
COMMD3-201ENST00000376836 FAM161AQ3B820 660 aa34.15■■■■□ 3.06
COMMD3-201ENST00000376836 LMBR1LQ6UX01 489 aa34.15■■■■□ 3.06
COMMD3-201ENST00000376836 SLC51AQ86UW1 340 aa34.15■■■■□ 3.06
COMMD3-201ENST00000376836 RTFDC1Q9BY42 306 aaPredicted RBP34.15■■■■□ 3.06
COMMD3-201ENST00000376836 MYH3P11055 1940 aa34.15■■■■□ 3.06
COMMD3-201ENST00000376836 TAF1P21675 1872 aa34.14■■■■□ 3.06
COMMD3-201ENST00000376836 LARGE2Q8N3Y3 721 aa34.14■■■■□ 3.06
COMMD3-201ENST00000376836 MPHOSPH8Q99549 860 aa34.14■■■■□ 3.06
COMMD3-201ENST00000376836 ANKIB1Q9P2G1 1089 aa34.14■■■■□ 3.06
COMMD3-201ENST00000376836 HDAC5Q9UQL6 1122 aa34.14■■■■□ 3.06
COMMD3-201ENST00000376836 CCDC57Q2TAC2 916 aa34.13■■■■□ 3.05
COMMD3-201ENST00000376836 SUCLG2Q96I99 432 aa34.13■■■■□ 3.05
COMMD3-201ENST00000376836 USP44Q9H0E7 712 aa34.13■■■■□ 3.05
COMMD3-201ENST00000376836 BSDC1Q9NW68 430 aaPredicted RBP34.13■■■■□ 3.05
COMMD3-201ENST00000376836 PPIP5K2O43314 1243 aa34.12■■■■□ 3.05
COMMD3-201ENST00000376836 TRIM27P14373 513 aa34.12■■■■□ 3.05
COMMD3-201ENST00000376836 GPSM2P81274 684 aa34.12■■■■□ 3.05
COMMD3-201ENST00000376836 YTHDC1Q96MU7 727 aaKnown RBP34.12■■■■□ 3.05
COMMD3-201ENST00000376836 CCDC88AQ3V6T2 1871 aa34.12■■■■□ 3.05
COMMD3-201ENST00000376836 TAF7LQ5H9L4 462 aa34.11■■■■□ 3.05
COMMD3-201ENST00000376836 GLTPD2A6NH11 291 aa34.1■■■■□ 3.05
COMMD3-201ENST00000376836 C6orf229H3BNL8 230 aa34.1■■■■□ 3.05
COMMD3-201ENST00000376836 EPHA10Q5JZY3 1008 aa34.1■■■■□ 3.05
COMMD3-201ENST00000376836 INTS3Q68E01 1043 aaKnown RBP34.1■■■■□ 3.05
COMMD3-201ENST00000376836 UBTFL1P0CB47 393 aaPredicted RBP34.09■■■■□ 3.05
COMMD3-201ENST00000376836 EYA3Q99504 573 aa34.09■■■■□ 3.05
COMMD3-201ENST00000376836 AOC3Q16853 763 aa34.08■■■■□ 3.05
COMMD3-201ENST00000376836 NIM1KQ8IY84 436 aa34.08■■■■□ 3.05
COMMD3-201ENST00000376836 CLUAP1Q96AJ1 413 aa34.08■■■■□ 3.05
COMMD3-201ENST00000376836 TIAM2Q8IVF5 1701 aa34.08■■■■□ 3.05
COMMD3-201ENST00000376836 FTSJ3Q8IY81 847 aaKnown RBP34.07■■■■□ 3.05
COMMD3-201ENST00000376836 BICC1Q9H694 974 aaKnown RBP34.07■■■■□ 3.05
COMMD3-201ENST00000376836 PODXL2Q9NZ53 605 aa34.07■■■■□ 3.05
COMMD3-201ENST00000376836 GGA1Q9UJY5 639 aa34.07■■■■□ 3.05
COMMD3-201ENST00000376836 XDHP47989 1333 aa34.07■■■■□ 3.04
COMMD3-201ENST00000376836 WASHC4Q2M389 1173 aa34.06■■■■□ 3.04
COMMD3-201ENST00000376836 LRRC37AA6NMS7 1700 aa34.06■■■■□ 3.04
COMMD3-201ENST00000376836 COL4A1P02462 1669 aa34.06■■■■□ 3.04
COMMD3-201ENST00000376836 DICER1Q9UPY3 1922 aaKnown RBP34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms