RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 EYA2O00167 538 aa26.08■■□□□ 1.77
RNF39-202ENST00000376751 SLC27A2O14975 620 aa26.08■■□□□ 1.77
RNF39-202ENST00000376751 COL9A3Q14050 684 aaPredicted RBP26.08■■□□□ 1.77
RNF39-202ENST00000376751 RFX7Q2KHR2 1363 aa26.08■■□□□ 1.76
RNF39-202ENST00000376751 RPAP1Q9BWH6 1393 aaPredicted RBP26.08■■□□□ 1.76
RNF39-202ENST00000376751 STARD3NLO95772 234 aa26.07■■□□□ 1.76
RNF39-202ENST00000376751 IL15P40933 162 aaPredicted RBP26.07■■□□□ 1.76
RNF39-202ENST00000376751 KIF6Q6ZMV9 814 aa26.07■■□□□ 1.76
RNF39-202ENST00000376751 GAS2L3Q86XJ1 694 aa26.07■■□□□ 1.76
RNF39-202ENST00000376751 PUS3Q9BZE2 481 aaKnown RBP26.07■■□□□ 1.76
RNF39-202ENST00000376751 KCNJ4P48050 445 aa26.07■■□□□ 1.76
RNF39-202ENST00000376751 TRIM28Q13263 835 aaKnown RBP26.07■■□□□ 1.76
RNF39-202ENST00000376751 TAF6LQ9Y6J9 622 aa26.07■■□□□ 1.76
RNF39-202ENST00000376751 NRAPQ86VF7 1730 aa26.06■■□□□ 1.76
RNF39-202ENST00000376751 VPS53Q5VIR6 699 aa26.06■■□□□ 1.76
RNF39-202ENST00000376751 GPR108Q9NPR9 543 aa26.06■■□□□ 1.76
RNF39-202ENST00000376751 PDRG1Q9NUG6 133 aa26.06■■□□□ 1.76
RNF39-202ENST00000376751 PANK2Q9BZ23 570 aa26.06■■□□□ 1.76
RNF39-202ENST00000376751 CYP46A1Q9Y6A2 500 aa26.06■■□□□ 1.76
RNF39-202ENST00000376751 MAP3K15Q6ZN16 1313 aa26.05■■□□□ 1.76
RNF39-202ENST00000376751 LTBP4Q8N2S1 1624 aa26.05■■□□□ 1.76
RNF39-202ENST00000376751 TAF5LO75529 589 aa26.05■■□□□ 1.76
RNF39-202ENST00000376751 CYP19A1P11511 503 aaPredicted RBP26.05■■□□□ 1.76
RNF39-202ENST00000376751 TIMM10P62072 90 aa26.05■■□□□ 1.76
RNF39-202ENST00000376751 DDX46Q7L014 1031 aaKnown RBP26.05■■□□□ 1.76
RNF39-202ENST00000376751 NEUROD6Q96NK8 337 aa26.05■■□□□ 1.76
RNF39-202ENST00000376751 ANKRD36CQ5JPF3 1778 aa26.05■■□□□ 1.76
RNF39-202ENST00000376751 EXOC5O00471 708 aa26.04■■□□□ 1.76
RNF39-202ENST00000376751 PRPF40AO75400 957 aaKnown RBP26.04■■□□□ 1.76
RNF39-202ENST00000376751 CIAO1O76071 339 aa26.04■■□□□ 1.76
RNF39-202ENST00000376751 PCCAP05165 728 aaPredicted RBP26.04■■□□□ 1.76
RNF39-202ENST00000376751 ZKSCAN1P17029 563 aaPredicted RBP26.04■■□□□ 1.76
RNF39-202ENST00000376751 HLFQ16534 295 aa26.04■■□□□ 1.76
RNF39-202ENST00000376751 FAM89AQ96GI7 184 aa26.04■■□□□ 1.76
RNF39-202ENST00000376751 GIGYF2Q6Y7W6 1299 aaKnown RBP26.02■■□□□ 1.76
RNF39-202ENST00000376751 CCDC129Q6ZRS4 1044 aa26.02■■□□□ 1.76
RNF39-202ENST00000376751 SYTL4Q96C24 671 aaPredicted RBP26.02■■□□□ 1.76
RNF39-202ENST00000376751 SEC62Q99442 399 aaKnown RBP26.02■■□□□ 1.76
RNF39-202ENST00000376751 PHLPP1O60346 1717 aa26.02■■□□□ 1.76
RNF39-202ENST00000376751 MRE11P49959 708 aa26.02■■□□□ 1.76
RNF39-202ENST00000376751 SYNE4Q8N205 404 aa26.02■■□□□ 1.76
RNF39-202ENST00000376751 GPT2Q8TD30 523 aa26.02■■□□□ 1.76
RNF39-202ENST00000376751 GRPEL1Q9HAV7 217 aa26.02■■□□□ 1.76
RNF39-202ENST00000376751 ZBTB1Q9Y2K1 713 aa26.02■■□□□ 1.76
RNF39-202ENST00000376751 ST3GAL1Q11201 340 aa26.01■■□□□ 1.75
RNF39-202ENST00000376751 CCDC85AQ96PX6 553 aaPredicted RBP26.01■■□□□ 1.75
RNF39-202ENST00000376751 PLA2G12BQ9BX93 195 aa26.01■■□□□ 1.75
RNF39-202ENST00000376751 ISY1Q9ULR0 285 aaKnown RBP26.01■■□□□ 1.75
RNF39-202ENST00000376751 NUP98P52948 1817 aa26.01■■□□□ 1.75
RNF39-202ENST00000376751 PALLDQ8WX93 1383 aa26■■□□□ 1.75
RNF39-202ENST00000376751 KBTBD3Q8NAB2 608 aa26■■□□□ 1.75
RNF39-202ENST00000376751 ZBTB38Q8NAP3 1195 aaPredicted RBP26■■□□□ 1.75
RNF39-202ENST00000376751 A0A1B0GUL7 405 aa26■■□□□ 1.75
RNF39-202ENST00000376751 GPTP24298 496 aa26■■□□□ 1.75
RNF39-202ENST00000376751 PRIM1P49642 420 aaKnown RBP26■■□□□ 1.75
RNF39-202ENST00000376751 USPL1Q5W0Q7 1092 aa26■■□□□ 1.75
RNF39-202ENST00000376751 GOLIM4O00461 696 aa25.99■■□□□ 1.75
RNF39-202ENST00000376751 ADAMTS2O95450 1211 aa25.99■■□□□ 1.75
RNF39-202ENST00000376751 CCDC57Q2TAC2 916 aa25.99■■□□□ 1.75
RNF39-202ENST00000376751 CCDC83Q8IWF9 413 aa25.99■■□□□ 1.75
RNF39-202ENST00000376751 WDR33Q9C0J8 1336 aaKnown RBP25.99■■□□□ 1.75
RNF39-202ENST00000376751 SLFNL1Q499Z3 407 aa25.98■■□□□ 1.75
RNF39-202ENST00000376751 CAVIN1Q6NZI2 390 aaKnown RBP25.98■■□□□ 1.75
RNF39-202ENST00000376751 NLRP10Q86W26 655 aa25.98■■□□□ 1.75
RNF39-202ENST00000376751 PAG1Q9NWQ8 432 aa25.98■■□□□ 1.75
RNF39-202ENST00000376751 TCHHQ07283 1943 aa25.98■■□□□ 1.75
RNF39-202ENST00000376751 DTNBO60941 627 aa25.98■■□□□ 1.75
RNF39-202ENST00000376751 CSF1RP07333 972 aa25.98■■□□□ 1.75
RNF39-202ENST00000376751 NCLP19338 710 aaKnown RBP25.98■■□□□ 1.75
RNF39-202ENST00000376751 RNF20Q5VTR2 975 aa25.98■■□□□ 1.75
RNF39-202ENST00000376751 SPATA31A1Q5TZJ5 1347 aa25.97■■□□□ 1.75
RNF39-202ENST00000376751 MYH3P11055 1940 aa25.97■■□□□ 1.75
RNF39-202ENST00000376751 ME3Q16798 604 aa25.97■■□□□ 1.75
RNF39-202ENST00000376751 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.97■■□□□ 1.75
RNF39-202ENST00000376751 SH3TC1Q8TE82 1336 aa25.97■■□□□ 1.75
RNF39-202ENST00000376751 SPEF2Q9C093 1822 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 PSMA5P28066 241 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 TSGA10IPQ3SY00 556 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 MCMDC2Q4G0Z9 681 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 ZSCAN31Q96LW9 406 aaPredicted RBP25.96■■□□□ 1.75
RNF39-202ENST00000376751 TCEANC2Q96MN5 208 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 SH2B1Q9NRF2 756 aaPredicted RBP25.96■■□□□ 1.75
RNF39-202ENST00000376751 HMG20BQ9P0W2 317 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 TPCN1Q9ULQ1 816 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 NSFL1CQ9UNZ2 370 aaKnown RBP25.96■■□□□ 1.75
RNF39-202ENST00000376751 CDHR2Q9BYE9 1310 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 RTN4Q9NQC3 1192 aaKnown RBP25.96■■□□□ 1.75
RNF39-202ENST00000376751 CEP126Q9P2H0 1117 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 SMC3Q9UQE7 1217 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 RIC1Q4ADV7 1423 aa25.96■■□□□ 1.75
RNF39-202ENST00000376751 RPS6KB1P23443 525 aa25.95■■□□□ 1.75
RNF39-202ENST00000376751 ADORA1P30542 326 aa25.95■■□□□ 1.75
RNF39-202ENST00000376751 RBM27Q9P2N5 1060 aaKnown RBP25.95■■□□□ 1.75
RNF39-202ENST00000376751 BLOC1S2Q6QNY1 142 aa25.95■■□□□ 1.74
RNF39-202ENST00000376751 SYT1P21579 422 aa25.94■■□□□ 1.74
RNF39-202ENST00000376751 ZSCAN23Q3MJ62 389 aa25.94■■□□□ 1.74
RNF39-202ENST00000376751 FOXD4L6Q3SYB3 417 aaPredicted RBP25.94■■□□□ 1.74
RNF39-202ENST00000376751 FOXD4L3Q6VB84 417 aaPredicted RBP25.94■■□□□ 1.74
RNF39-202ENST00000376751 NECAB1Q8N987 351 aa25.94■■□□□ 1.74
RNF39-202ENST00000376751 IFIT1P09914 478 aaKnown RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms