RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PSDA5PKW4 1024 aaPredicted RBP28.5■■■□□ 2.15
HLA-C-202ENST00000376237 CCDC57Q2TAC2 916 aa28.5■■■□□ 2.15
HLA-C-202ENST00000376237 GCC1Q96CN9 775 aa28.5■■■□□ 2.15
HLA-C-202ENST00000376237 NRXN2Q9P2S2 1712 aa28.49■■■□□ 2.15
HLA-C-202ENST00000376237 IFIT5Q13325 482 aaKnown RBP28.49■■■□□ 2.15
HLA-C-202ENST00000376237 BRIP1Q9BX63 1249 aa28.49■■■□□ 2.15
HLA-C-202ENST00000376237 DCTPP1Q9H773 170 aa28.49■■■□□ 2.15
HLA-C-202ENST00000376237 RTL9Q8NET4 1388 aa28.49■■■□□ 2.15
HLA-C-202ENST00000376237 LAMB2P55268 1798 aa28.49■■■□□ 2.15
HLA-C-202ENST00000376237 ZBTB7AO95365 584 aa28.48■■■□□ 2.15
HLA-C-202ENST00000376237 DDX60Q8IY21 1712 aaKnown RBP28.48■■■□□ 2.15
HLA-C-202ENST00000376237 KDM2BQ8NHM5 1336 aa28.48■■■□□ 2.15
HLA-C-202ENST00000376237 POLD1P28340 1107 aa28.48■■■□□ 2.15
HLA-C-202ENST00000376237 CCDC24Q8N4L8 307 aa28.48■■■□□ 2.15
HLA-C-202ENST00000376237 ANKRD18BA2A2Z9 1011 aa28.47■■■□□ 2.15
HLA-C-202ENST00000376237 RFX5P48382 616 aaPredicted RBP28.47■■■□□ 2.15
HLA-C-202ENST00000376237 FAM161AQ3B820 660 aa28.47■■■□□ 2.15
HLA-C-202ENST00000376237 HSP90AB4PQ58FF6 505 aa28.47■■■□□ 2.15
HLA-C-202ENST00000376237 SMC5Q8IY18 1101 aa28.47■■■□□ 2.15
HLA-C-202ENST00000376237 GREM2Q9H772 168 aa28.47■■■□□ 2.15
HLA-C-202ENST00000376237 COPRSQ9NQ92 184 aa28.47■■■□□ 2.15
HLA-C-202ENST00000376237 NOP58Q9Y2X3 529 aaKnown RBP28.47■■■□□ 2.15
HLA-C-202ENST00000376237 ITGA6P23229 1130 aa28.46■■■□□ 2.15
HLA-C-202ENST00000376237 KLRG2A4D1S0 409 aaPredicted RBP28.45■■■□□ 2.15
HLA-C-202ENST00000376237 CCDC85AQ96PX6 553 aaPredicted RBP28.45■■■□□ 2.15
HLA-C-202ENST00000376237 MYH3P11055 1940 aa28.45■■■□□ 2.14
HLA-C-202ENST00000376237 SURF6O75683 361 aaKnown RBP28.44■■■□□ 2.14
HLA-C-202ENST00000376237 PDE6BP35913 854 aa28.44■■■□□ 2.14
HLA-C-202ENST00000376237 PTPN12Q05209 780 aaKnown RBP28.44■■■□□ 2.14
HLA-C-202ENST00000376237 CRY2Q49AN0 593 aa28.43■■■□□ 2.14
HLA-C-202ENST00000376237 C3orf67Q6ZVT6 689 aa28.43■■■□□ 2.14
HLA-C-202ENST00000376237 FBXO3Q9UK99 471 aa28.43■■■□□ 2.14
HLA-C-202ENST00000376237 ATF5Q9Y2D1 282 aaPredicted RBP28.43■■■□□ 2.14
HLA-C-202ENST00000376237 TAF7LQ5H9L4 462 aa28.43■■■□□ 2.14
HLA-C-202ENST00000376237 PDZRN3Q9UPQ7 1066 aa28.43■■■□□ 2.14
HLA-C-202ENST00000376237 RAB11FIP3O75154 756 aa28.42■■■□□ 2.14
HLA-C-202ENST00000376237 CDC5LQ99459 802 aaKnown RBP28.42■■■□□ 2.14
HLA-C-202ENST00000376237 G3BP1Q13283 466 aaKnown RBP eCLIP28.41■■■□□ 2.14
HLA-C-202ENST00000376237 DDX46Q7L014 1031 aaKnown RBP28.41■■■□□ 2.14
HLA-C-202ENST00000376237 PA2G4Q9UQ80 394 aaKnown RBP28.4■■■□□ 2.14
HLA-C-202ENST00000376237 EXOC6BQ9Y2D4 811 aa28.4■■■□□ 2.14
HLA-C-202ENST00000376237 ERC1Q8IUD2 1116 aa28.39■■■□□ 2.14
HLA-C-202ENST00000376237 RPGRQ92834 1020 aaKnown RBP28.39■■■□□ 2.14
HLA-C-202ENST00000376237 CIAO1O76071 339 aa28.38■■■□□ 2.13
HLA-C-202ENST00000376237 KLHDC4Q8TBB5 520 aa28.38■■■□□ 2.13
HLA-C-202ENST00000376237 SEC31BQ9NQW1 1179 aa28.38■■■□□ 2.13
HLA-C-202ENST00000376237 OS9Q13438 667 aaPredicted RBP28.38■■■□□ 2.13
HLA-C-202ENST00000376237 SGIP1Q9BQI5 828 aa28.38■■■□□ 2.13
HLA-C-202ENST00000376237 EYA2O00167 538 aa28.37■■■□□ 2.13
HLA-C-202ENST00000376237 HOXA10P31260 410 aaPredicted RBP28.37■■■□□ 2.13
HLA-C-202ENST00000376237 IGHMBP2P38935 993 aaKnown RBP28.37■■■□□ 2.13
HLA-C-202ENST00000376237 LDHAL6AQ6ZMR3 332 aa28.37■■■□□ 2.13
HLA-C-202ENST00000376237 RBM17Q96I25 401 aaKnown RBP28.37■■■□□ 2.13
HLA-C-202ENST00000376237 ZNF594Q96JF6 807 aaPredicted RBP28.37■■■□□ 2.13
HLA-C-202ENST00000376237 TNRC6CQ9HCJ0 1690 aaKnown RBP28.36■■■□□ 2.13
HLA-C-202ENST00000376237 ANKRD18AQ8IVF6 992 aa28.36■■■□□ 2.13
HLA-C-202ENST00000376237 KIF1BPQ96EK5 621 aa28.36■■■□□ 2.13
HLA-C-202ENST00000376237 MPHOSPH8Q99549 860 aa28.36■■■□□ 2.13
HLA-C-202ENST00000376237 SIL1Q9H173 461 aa28.36■■■□□ 2.13
HLA-C-202ENST00000376237 SPON1Q9HCB6 807 aa28.36■■■□□ 2.13
HLA-C-202ENST00000376237 ZBTB47Q9UFB7 747 aaPredicted RBP28.36■■■□□ 2.13
HLA-C-202ENST00000376237 C10orf71Q711Q0 1435 aa28.36■■■□□ 2.13
HLA-C-202ENST00000376237 SRGNP10124 158 aa28.35■■■□□ 2.13
HLA-C-202ENST00000376237 IL15P40933 162 aaPredicted RBP28.35■■■□□ 2.13
HLA-C-202ENST00000376237 NPR1P16066 1061 aa28.34■■■□□ 2.13
HLA-C-202ENST00000376237 ANKRD45Q5TZF3 282 aa28.34■■■□□ 2.13
HLA-C-202ENST00000376237 CRAMP1Q96RY5 1269 aa28.34■■■□□ 2.13
HLA-C-202ENST00000376237 LRRCC1Q9C099 1032 aa28.34■■■□□ 2.13
HLA-C-202ENST00000376237 H0YIN7 160 aa28.33■■■□□ 2.13
HLA-C-202ENST00000376237 PTGER2P43116 358 aa28.33■■■□□ 2.13
HLA-C-202ENST00000376237 RPS8P62241 208 aaKnown RBP28.33■■■□□ 2.13
HLA-C-202ENST00000376237 NUCB1Q02818 461 aa28.33■■■□□ 2.13
HLA-C-202ENST00000376237 GRAPQ13588 217 aa28.33■■■□□ 2.13
HLA-C-202ENST00000376237 GRAPLQ8TC17 118 aaPredicted RBP28.33■■■□□ 2.13
HLA-C-202ENST00000376237 CNNM1Q9NRU3 951 aa28.33■■■□□ 2.13
HLA-C-202ENST00000376237 RHPN1Q8TCX5 695 aa28.33■■■□□ 2.13
HLA-C-202ENST00000376237 MASTLQ96GX5 879 aa28.33■■■□□ 2.13
HLA-C-202ENST00000376237 BSDC1Q9NW68 430 aaPredicted RBP28.33■■■□□ 2.13
HLA-C-202ENST00000376237 ALDH1B1P30837 517 aa28.32■■■□□ 2.12
HLA-C-202ENST00000376237 ATG9AQ7Z3C6 839 aa28.32■■■□□ 2.12
HLA-C-202ENST00000376237 ANKRD31Q8N7Z5 1873 aa28.31■■■□□ 2.12
HLA-C-202ENST00000376237 CHD1LQ86WJ1 897 aa28.31■■■□□ 2.12
HLA-C-202ENST00000376237 C2CD5Q86YS7 1000 aa28.31■■■□□ 2.12
HLA-C-202ENST00000376237 CELF1Q92879 486 aaKnown RBP28.31■■■□□ 2.12
HLA-C-202ENST00000376237 RIPOR2Q9Y4F9 1068 aa28.31■■■□□ 2.12
HLA-C-202ENST00000376237 APBB1O00213 710 aa28.3■■■□□ 2.12
HLA-C-202ENST00000376237 BBOX1O75936 387 aa28.3■■■□□ 2.12
HLA-C-202ENST00000376237 LRRC24Q50LG9 513 aa28.3■■■□□ 2.12
HLA-C-202ENST00000376237 STYK1Q6J9G0 422 aa28.3■■■□□ 2.12
HLA-C-202ENST00000376237 PUS3Q9BZE2 481 aaKnown RBP28.3■■■□□ 2.12
HLA-C-202ENST00000376237 SASH1O94885 1247 aa28.29■■■□□ 2.12
HLA-C-202ENST00000376237 MROH5Q6ZUA9 1318 aa28.29■■■□□ 2.12
HLA-C-202ENST00000376237 TGFB2P61812 414 aa28.28■■■□□ 2.12
HLA-C-202ENST00000376237 TMC4Q7Z404 712 aa28.28■■■□□ 2.12
HLA-C-202ENST00000376237 LRP5O75197 1615 aa28.28■■■□□ 2.12
HLA-C-202ENST00000376237 CEP126Q9P2H0 1117 aa28.28■■■□□ 2.12
HLA-C-202ENST00000376237 CD2APQ9Y5K6 639 aa28.28■■■□□ 2.12
HLA-C-202ENST00000376237 CLASRPQ8N2M8 674 aaKnown RBP28.27■■■□□ 2.12
HLA-C-202ENST00000376237 GPR108Q9NPR9 543 aa28.26■■■□□ 2.11
HLA-C-202ENST00000376237 TFCP2Q12800 502 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms