RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 TOP2BQ02880 1626 aa11.21□□□□□ -0.61
SPEN-201ENST00000375759 GRIN2BQ13224 1484 aa11.21□□□□□ -0.61
SPEN-201ENST00000375759 SYNJ1O43426 1573 aa11.21□□□□□ -0.62
SPEN-201ENST00000375759 CCDC174Q6PII3 467 aa11.21□□□□□ -0.62
SPEN-201ENST00000375759 MFSD6Q6ZSS7 791 aa11.21□□□□□ -0.62
SPEN-201ENST00000375759 CEP57Q86XR8 500 aa11.21□□□□□ -0.62
SPEN-201ENST00000375759 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.62
SPEN-201ENST00000375759 NBPF11Q86T75 865 aa11.21□□□□□ -0.62
SPEN-201ENST00000375759 NBPF7P0C2Y1 421 aaPredicted RBP11.21□□□□□ -0.62
SPEN-201ENST00000375759 ZBTB16Q05516 673 aa11.21□□□□□ -0.62
SPEN-201ENST00000375759 SPTY2D1Q68D10 685 aaPredicted RBP11.21□□□□□ -0.62
SPEN-201ENST00000375759 PROSER2Q86WR7 435 aaPredicted RBP11.21□□□□□ -0.62
SPEN-201ENST00000375759 AFAP1Q8N556 730 aa11.21□□□□□ -0.62
SPEN-201ENST00000375759 ARFGAP2Q8N6H7 521 aa11.21□□□□□ -0.62
SPEN-201ENST00000375759 NAP1L3Q99457 506 aaPredicted RBP11.21□□□□□ -0.62
SPEN-201ENST00000375759 KIF5AQ12840 1032 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 ANKIB1Q9P2G1 1089 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 STAT6P42226 847 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 STIM2Q9P246 746 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 ISM2Q6H9L7 571 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 MIS18AQ9NYP9 233 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 ERMNQ8TAM6 284 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 DBF4Q9UBU7 674 aaPredicted RBP11.2□□□□□ -0.62
SPEN-201ENST00000375759 DCAF8L1A6NGE4 600 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 MICU3Q86XE3 530 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 SPAG5Q96R06 1193 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 MYD88Q99836 296 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 NSD2O96028 1365 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 CAMSAP2Q08AD1 1489 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 NOL3O60936 208 aaKnown RBP11.2□□□□□ -0.62
SPEN-201ENST00000375759 XRCC6P12956 609 aaKnown RBP eCLIP11.2□□□□□ -0.624e-7■■□□□ 14.1
SPEN-201ENST00000375759 HDXQ7Z353 690 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 WDR66Q8TBY9 1149 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 TSGA10Q9BZW7 698 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 CCDC8Q9H0W5 538 aaPredicted RBP11.2□□□□□ -0.62
SPEN-201ENST00000375759 SSX2IPQ9Y2D8 614 aa11.2□□□□□ -0.62
SPEN-201ENST00000375759 TBCAO75347 108 aaKnown RBP11.19□□□□□ -0.62
SPEN-201ENST00000375759 TMX3Q96JJ7 454 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 OGFRQ9NZT2 677 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 TROQ12816 1431 aaPredicted RBP11.19□□□□□ -0.62
SPEN-201ENST00000375759 RAB3IL1Q8TBN0 382 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 USP48Q86UV5 1035 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 SNX21Q969T3 373 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 JAKMIP2Q96AA8 810 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 PRDM11Q9NQV5 511 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 KIF14Q15058 1648 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 NUCB1Q02818 461 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 HDAC1Q13547 482 aaPredicted RBP11.19□□□□□ -0.62
SPEN-201ENST00000375759 B4GALNT4Q76KP1 1039 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 CPLX4Q7Z7G2 160 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 VPS18Q9P253 973 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 ANAPC4Q9UJX5 808 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 PSMA7O14818 248 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 MRPS27Q92552 414 aaKnown RBP11.19□□□□□ -0.62
SPEN-201ENST00000375759 VAV2P52735 878 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 GBP6Q6ZN66 633 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 CCDC186Q7Z3E2 898 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 SLC26A6Q9BXS9 759 aa11.19□□□□□ -0.62
SPEN-201ENST00000375759 KAT14Q9H8E8 782 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 ZNF830Q96NB3 372 aaPredicted RBP11.18□□□□□ -0.62
SPEN-201ENST00000375759 SERPINA10Q9UK55 444 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 A6NNZ2 444 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 TUBB8Q3ZCM7 444 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 CCDC114Q96M63 670 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 SAMD15Q9P1V8 674 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 TMTC2Q8N394 836 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 RASSF4Q9H2L5 321 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 SYNCQ9H7C4 482 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 PUF60Q9UHX1 559 aaKnown RBP11.18□□□□□ -0.62
SPEN-201ENST00000375759 CNPY2Q9Y2B0 182 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 FAM76AQ8TAV0 307 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 CPSF2Q9P2I0 782 aaKnown RBP11.18□□□□□ -0.62
SPEN-201ENST00000375759 RNF216Q9NWF9 866 aaPredicted RBP11.18□□□□□ -0.62
SPEN-201ENST00000375759 RRAGBQ5VZM2 374 aa11.18□□□□□ -0.62
SPEN-201ENST00000375759 ZPR1O75312 459 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 FLIIQ13045 1269 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 FMNL3Q8IVF7 1028 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 KRT23Q9C075 422 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 CCDC144CPQ8IYA2 1237 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 PANK2Q9BZ23 570 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 IL16Q14005 1332 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 PIK3R4Q99570 1358 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 RALGAPBQ86X10 1494 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 BAG3O95817 575 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 LACTBP83111 547 aaPredicted RBP11.17□□□□□ -0.62
SPEN-201ENST00000375759 TYRO3Q06418 890 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 KRT13P13646 458 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 SETDB1Q15047 1291 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 MAP7D1Q3KQU3 841 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 THUMPD2Q9BTF0 503 aaKnown RBP11.17□□□□□ -0.62
SPEN-201ENST00000375759 RTL1A6NKG5 1358 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 LARP6Q9BRS8 491 aaKnown RBP11.17□□□□□ -0.62
SPEN-201ENST00000375759 ZWINTO95229 277 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 CCDC110Q8TBZ0 833 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 AOPEPQ8N6M6 819 aa11.17□□□□□ -0.62
SPEN-201ENST00000375759 PUS7Q96PZ0 661 aaKnown RBP11.17□□□□□ -0.62
SPEN-201ENST00000375759 A0A1B0GUA9 196 aa11.16□□□□□ -0.62
SPEN-201ENST00000375759 TMOD3Q9NYL9 352 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms