RNA–Protein interactions for RNA: ENST00000375472.7

SUSD3-202, Transcript of sushi domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD3, Length 1,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-202ENST00000375472 PPEF1O14829 653 aaPredicted RBP29.07■■■□□ 2.24
SUSD3-202ENST00000375472 JARID2Q92833 1246 aaPredicted RBP29.07■■■□□ 2.24
SUSD3-202ENST00000375472 PLA2G12BQ9BX93 195 aa29.07■■■□□ 2.24
SUSD3-202ENST00000375472 LTBP3Q9NS15 1303 aa29.07■■■□□ 2.24
SUSD3-202ENST00000375472 IPO8O15397 1037 aaKnown RBP29.06■■■□□ 2.24
SUSD3-202ENST00000375472 CASP7P55210 303 aa29.06■■■□□ 2.24
SUSD3-202ENST00000375472 GRM8O00222 908 aa29.05■■■□□ 2.24
SUSD3-202ENST00000375472 TAOK3Q9H2K8 898 aa29.05■■■□□ 2.24
SUSD3-202ENST00000375472 C9orf78Q9NZ63 289 aaPredicted RBP29.05■■■□□ 2.24
SUSD3-202ENST00000375472 NFKBIEO00221 500 aa29.04■■■□□ 2.24
SUSD3-202ENST00000375472 CTSWP56202 376 aa29.04■■■□□ 2.24
SUSD3-202ENST00000375472 ATP6V0A2Q9Y487 856 aa29.04■■■□□ 2.24
SUSD3-202ENST00000375472 FER1L6Q2WGJ9 1857 aa29.04■■■□□ 2.24
SUSD3-202ENST00000375472 LMNB1P20700 586 aa29.03■■■□□ 2.24
SUSD3-202ENST00000375472 CCT4P50991 539 aaKnown RBP29.02■■■□□ 2.24
SUSD3-202ENST00000375472 SP8Q8IXZ3 490 aa29.02■■■□□ 2.24
SUSD3-202ENST00000375472 RASSF7Q02833 373 aa29.01■■■□□ 2.23
SUSD3-202ENST00000375472 C9orf131Q5VYM1 1079 aa29.01■■■□□ 2.23
SUSD3-202ENST00000375472 TTLL11Q8NHH1 800 aa29.01■■■□□ 2.23
SUSD3-202ENST00000375472 RTL9Q8NET4 1388 aa29.01■■■□□ 2.23
SUSD3-202ENST00000375472 BCAR3O75815 825 aa29■■■□□ 2.23
SUSD3-202ENST00000375472 FKBP4Q02790 459 aaKnown RBP eCLIP29■■■□□ 2.23
SUSD3-202ENST00000375472 MYH3P11055 1940 aa29■■■□□ 2.23
SUSD3-202ENST00000375472 UTYO14607 1347 aa28.99■■■□□ 2.23
SUSD3-202ENST00000375472 RPS8P62241 208 aaKnown RBP28.99■■■□□ 2.23
SUSD3-202ENST00000375472 PSMD1Q99460 953 aa28.99■■■□□ 2.23
SUSD3-202ENST00000375472 RNF181Q9P0P0 153 aa28.99■■■□□ 2.23
SUSD3-202ENST00000375472 ZC3H4Q9UPT8 1303 aaKnown RBP28.98■■■□□ 2.23
SUSD3-202ENST00000375472 SBF1O95248 1867 aa28.98■■■□□ 2.23
SUSD3-202ENST00000375472 CELF1Q92879 486 aaKnown RBP28.98■■■□□ 2.23
SUSD3-202ENST00000375472 CDC5LQ99459 802 aaKnown RBP28.98■■■□□ 2.23
SUSD3-202ENST00000375472 CSF1RP07333 972 aa28.97■■■□□ 2.23
SUSD3-202ENST00000375472 OLFM4Q6UX06 510 aa28.97■■■□□ 2.23
SUSD3-202ENST00000375472 SNED1Q8TER0 1413 aa28.96■■■□□ 2.23
SUSD3-202ENST00000375472 ATF7IPQ6VMQ6 1270 aa28.96■■■□□ 2.23
SUSD3-202ENST00000375472 FRAT1Q92837 279 aaPredicted RBP28.96■■■□□ 2.23
SUSD3-202ENST00000375472 ZKSCAN2Q63HK3 967 aa28.95■■■□□ 2.22
SUSD3-202ENST00000375472 ANKRD18AQ8IVF6 992 aa28.95■■■□□ 2.22
SUSD3-202ENST00000375472 CCDC85AQ96PX6 553 aaPredicted RBP28.95■■■□□ 2.22
SUSD3-202ENST00000375472 GREM2Q9H772 168 aa28.95■■■□□ 2.22
SUSD3-202ENST00000375472 SEC31BQ9NQW1 1179 aa28.95■■■□□ 2.22
SUSD3-202ENST00000375472 SUPT20HQ8NEM7 779 aa28.94■■■□□ 2.22
SUSD3-202ENST00000375472 NBPF7P0C2Y1 421 aaPredicted RBP28.93■■■□□ 2.22
SUSD3-202ENST00000375472 FOXO4P98177 505 aa28.93■■■□□ 2.22
SUSD3-202ENST00000375472 VPS33BQ9H267 617 aa28.93■■■□□ 2.22
SUSD3-202ENST00000375472 TAF1P21675 1872 aa28.92■■■□□ 2.22
SUSD3-202ENST00000375472 TRIM27P14373 513 aa28.92■■■□□ 2.22
SUSD3-202ENST00000375472 PRELPP51888 382 aa28.92■■■□□ 2.22
SUSD3-202ENST00000375472 INTS3Q68E01 1043 aaKnown RBP28.92■■■□□ 2.22
SUSD3-202ENST00000375472 DPP8Q6V1X1 898 aaPredicted RBP28.92■■■□□ 2.22
SUSD3-202ENST00000375472 MPNDQ8N594 471 aa28.92■■■□□ 2.22
SUSD3-202ENST00000375472 USP44Q9H0E7 712 aa28.92■■■□□ 2.22
SUSD3-202ENST00000375472 HDAC5Q9UQL6 1122 aa28.92■■■□□ 2.22
SUSD3-202ENST00000375472 RTFDC1Q9BY42 306 aaPredicted RBP28.91■■■□□ 2.22
SUSD3-202ENST00000375472 ITGA6P23229 1130 aa28.9■■■□□ 2.22
SUSD3-202ENST00000375472 IARSP41252 1262 aaKnown RBP28.9■■■□□ 2.22
SUSD3-202ENST00000375472 ZNF784Q8NCA9 323 aaPredicted RBP28.9■■■□□ 2.22
SUSD3-202ENST00000375472 CCDC88AQ3V6T2 1871 aa28.89■■■□□ 2.22
SUSD3-202ENST00000375472 LRRC37AA6NMS7 1700 aa28.89■■■□□ 2.22
SUSD3-202ENST00000375472 ANKRD18BA2A2Z9 1011 aa28.89■■■□□ 2.22
SUSD3-202ENST00000375472 IGHMBP2P38935 993 aaKnown RBP28.89■■■□□ 2.22
SUSD3-202ENST00000375472 FAM161AQ3B820 660 aa28.89■■■□□ 2.22
SUSD3-202ENST00000375472 SUCLG2Q96I99 432 aa28.89■■■□□ 2.22
SUSD3-202ENST00000375472 ZNF277Q9NRM2 450 aaPredicted RBP28.89■■■□□ 2.22
SUSD3-202ENST00000375472 DICER1Q9UPY3 1922 aaKnown RBP28.88■■■□□ 2.21
SUSD3-202ENST00000375472 IFIT5Q13325 482 aaKnown RBP28.88■■■□□ 2.21
SUSD3-202ENST00000375472 LMBR1LQ6UX01 489 aa28.88■■■□□ 2.21
SUSD3-202ENST00000375472 BSDC1Q9NW68 430 aaPredicted RBP28.88■■■□□ 2.21
SUSD3-202ENST00000375472 NSFL1CQ9UNZ2 370 aaKnown RBP28.87■■■□□ 2.21
SUSD3-202ENST00000375472 CHMP3Q9Y3E7 222 aa28.87■■■□□ 2.21
SUSD3-202ENST00000375472 CCDC57Q2TAC2 916 aa28.86■■■□□ 2.21
SUSD3-202ENST00000375472 EPHA10Q5JZY3 1008 aa28.86■■■□□ 2.21
SUSD3-202ENST00000375472 KAZALD1Q96I82 304 aa28.86■■■□□ 2.21
SUSD3-202ENST00000375472 PODXL2Q9NZ53 605 aa28.86■■■□□ 2.21
SUSD3-202ENST00000375472 RCAN3Q9UKA8 241 aa28.86■■■□□ 2.21
SUSD3-202ENST00000375472 UBTFL1P0CB47 393 aaPredicted RBP28.85■■■□□ 2.21
SUSD3-202ENST00000375472 RABL6Q3YEC7 729 aaPredicted RBP28.85■■■□□ 2.21
SUSD3-202ENST00000375472 JDP2Q8WYK2 163 aa28.85■■■□□ 2.21
SUSD3-202ENST00000375472 YTHDC1Q96MU7 727 aaKnown RBP28.85■■■□□ 2.21
SUSD3-202ENST00000375472 MPHOSPH8Q99549 860 aa28.85■■■□□ 2.21
SUSD3-202ENST00000375472 COL4A1P02462 1669 aa28.84■■■□□ 2.21
SUSD3-202ENST00000375472 MS4A1P11836 297 aa28.83■■■□□ 2.21
SUSD3-202ENST00000375472 GPSM2P81274 684 aa28.83■■■□□ 2.21
SUSD3-202ENST00000375472 DPY19L2Q6NUT2 758 aa28.83■■■□□ 2.21
SUSD3-202ENST00000375472 SLC51AQ86UW1 340 aa28.83■■■□□ 2.21
SUSD3-202ENST00000375472 FTSJ3Q8IY81 847 aaKnown RBP28.83■■■□□ 2.21
SUSD3-202ENST00000375472 CLUAP1Q96AJ1 413 aa28.83■■■□□ 2.21
SUSD3-202ENST00000375472 BICC1Q9H694 974 aaKnown RBP28.83■■■□□ 2.21
SUSD3-202ENST00000375472 KDM2BQ8NHM5 1336 aa28.83■■■□□ 2.21
SUSD3-202ENST00000375472 GNAI3P08754 354 aa28.82■■■□□ 2.2
SUSD3-202ENST00000375472 DZIP1LQ8IYY4 767 aaKnown RBP28.82■■■□□ 2.2
SUSD3-202ENST00000375472 LARGE2Q8N3Y3 721 aa28.82■■■□□ 2.2
SUSD3-202ENST00000375472 EYA3Q99504 573 aa28.82■■■□□ 2.2
SUSD3-202ENST00000375472 GPBP1L1Q9HC44 474 aaPredicted RBP28.82■■■□□ 2.2
SUSD3-202ENST00000375472 ANKIB1Q9P2G1 1089 aa28.82■■■□□ 2.2
SUSD3-202ENST00000375472 TIAM2Q8IVF5 1701 aa28.82■■■□□ 2.2
SUSD3-202ENST00000375472 XDHP47989 1333 aa28.81■■■□□ 2.2
SUSD3-202ENST00000375472 PPIP5K2O43314 1243 aa28.81■■■□□ 2.2
SUSD3-202ENST00000375472 TAF7LQ5H9L4 462 aa28.81■■■□□ 2.2
SUSD3-202ENST00000375472 MINPP1Q9UNW1 487 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms