RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OPLAHO14841 1288 aa7.78□□□□□ -1.16
USP48-202ENST00000374730 NID1P14543 1247 aa7.78□□□□□ -1.16
USP48-202ENST00000374730 BRD2P25440 801 aaKnown RBP7.78□□□□□ -1.16
USP48-202ENST00000374730 TBC1D8BQ0IIM8 1120 aa7.78□□□□□ -1.16
USP48-202ENST00000374730 RTCBQ9Y3I0 505 aaKnown RBP7.78□□□□□ -1.16
USP48-202ENST00000374730 LILRB5O75023 590 aa7.77□□□□□ -1.17
USP48-202ENST00000374730 PPP1R15AO75807 674 aaPredicted RBP7.77□□□□□ -1.17
USP48-202ENST00000374730 PRRT3Q5FWE3 981 aa7.77□□□□□ -1.17
USP48-202ENST00000374730 ERICH6Q7L0X2 663 aa7.77□□□□□ -1.17
USP48-202ENST00000374730 MKNK1Q9BUB5 465 aa7.77□□□□□ -1.17
USP48-202ENST00000374730 SAP130Q9H0E3 1048 aa7.77□□□□□ -1.17
USP48-202ENST00000374730 TNFRSF10BO14763 440 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 ATP2B4P23634 1241 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 C8orf86Q6ZUL3 223 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 DHX32Q7L7V1 743 aaKnown RBP7.76□□□□□ -1.17
USP48-202ENST00000374730 C14orf37Q86TY3 774 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 ETFBKMTQ8IXQ9 262 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 TRPM4Q8TD43 1214 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 IGFLR1Q9H665 355 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 ZFATQ9P243 1243 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 SLAIN2Q9P270 581 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 NAGPAQ9UK23 515 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 SMARCA4P51532 1647 aa7.76□□□□□ -1.17
USP48-202ENST00000374730 C1QTNF9BB2RNN3 333 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 RARAP10276 462 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 ARID4AP29374 1257 aaPredicted RBP7.75□□□□□ -1.17
USP48-202ENST00000374730 CHRNA4P43681 627 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 GPLD1P80108 840 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 PSAPL1Q6NUJ1 521 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 KRT25Q7Z3Z0 450 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 CD163Q86VB7 1156 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 RGL4Q8IZJ4 473 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 JPH1Q9HDC5 661 aaPredicted RBP7.75□□□□□ -1.17
USP48-202ENST00000374730 FAM13BQ9NYF5 915 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 FRRS1LQ9P0K9 344 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 KCNMB2Q9Y691 235 aa7.75□□□□□ -1.17
USP48-202ENST00000374730 EIF4G1Q04637 1599 aaKnown RBP7.75□□□□□ -1.17
USP48-202ENST00000374730 XYLBO75191 536 aa7.74□□□□□ -1.17
USP48-202ENST00000374730 SASH3O75995 380 aa7.74□□□□□ -1.17
USP48-202ENST00000374730 TARSP26639 723 aaKnown RBP7.74□□□□□ -1.17
USP48-202ENST00000374730 NRLP54845 237 aa7.74□□□□□ -1.17
USP48-202ENST00000374730 CAPN12Q6ZSI9 719 aa7.74□□□□□ -1.17
USP48-202ENST00000374730 CMTR1Q8N1G2 835 aaKnown RBP7.74□□□□□ -1.17
USP48-202ENST00000374730 C1orf115Q9H7X2 142 aa7.74□□□□□ -1.17
USP48-202ENST00000374730 SUZ12Q15022 739 aaKnown RBP7.73□□□□□ -1.17
USP48-202ENST00000374730 FAM35AQ86V20 835 aa7.73□□□□□ -1.17
USP48-202ENST00000374730 ABTB2Q8N961 1025 aa7.73□□□□□ -1.17
USP48-202ENST00000374730 TLR7Q9NYK1 1049 aaKnown RBP7.73□□□□□ -1.17
USP48-202ENST00000374730 STIM2Q9P246 746 aa7.73□□□□□ -1.17
USP48-202ENST00000374730 USP20Q9Y2K6 914 aa7.73□□□□□ -1.17
USP48-202ENST00000374730 TOP2AP11388 1531 aaKnown RBP7.73□□□□□ -1.17
USP48-202ENST00000374730 BICRAQ9NZM4 1560 aa7.72□□□□□ -1.17
USP48-202ENST00000374730 RGS9O75916 674 aaPredicted RBP7.72□□□□□ -1.17
USP48-202ENST00000374730 HOXD8P13378 290 aaPredicted RBP7.72□□□□□ -1.17
USP48-202ENST00000374730 SOX18P35713 384 aa7.72□□□□□ -1.17
USP48-202ENST00000374730 BAG6P46379 1132 aa7.72□□□□□ -1.17
USP48-202ENST00000374730 TRIM28Q13263 835 aaKnown RBP7.72□□□□□ -1.17
USP48-202ENST00000374730 NAA30Q147X3 362 aaPredicted RBP7.72□□□□□ -1.17
USP48-202ENST00000374730 NUDT8Q8WV74 236 aa7.72□□□□□ -1.17
USP48-202ENST00000374730 NACC1Q96RE7 527 aa7.72□□□□□ -1.17
USP48-202ENST00000374730 LPIN3Q9BQK8 851 aa7.72□□□□□ -1.17
USP48-202ENST00000374730 ZBTB42B2RXF5 422 aa7.71□□□□□ -1.18
USP48-202ENST00000374730 CPB1P15086 417 aa7.71□□□□□ -1.18
USP48-202ENST00000374730 AFF1P51825 1210 aaKnown RBP7.71□□□□□ -1.18
USP48-202ENST00000374730 FAM26DQ5JW98 314 aa7.71□□□□□ -1.18
USP48-202ENST00000374730 PIK3R5Q8WYR1 880 aa7.71□□□□□ -1.18
USP48-202ENST00000374730 TTC9Q92623 222 aa7.71□□□□□ -1.18
USP48-202ENST00000374730 TMEM88BA6NKF7 163 aa7.7□□□□□ -1.18
USP48-202ENST00000374730 APBA3O96018 575 aa7.7□□□□□ -1.18
USP48-202ENST00000374730 PSAPP07602 524 aa7.7□□□□□ -1.18
USP48-202ENST00000374730 ZAP70P43403 619 aa7.7□□□□□ -1.18
USP48-202ENST00000374730 PLAURQ03405 335 aa7.7□□□□□ -1.18
USP48-202ENST00000374730 TRIP4Q15650 581 aaPredicted RBP7.7□□□□□ -1.18
USP48-202ENST00000374730 TRAPPC3LQ5T215 181 aa7.7□□□□□ -1.18
USP48-202ENST00000374730 ILDR2Q71H61 639 aa7.7□□□□□ -1.18
USP48-202ENST00000374730 NLRP13Q86W25 1043 aa7.7□□□□□ -1.18
USP48-202ENST00000374730 A0A0A0MRY4 1105 aa7.69□□□□□ -1.18
USP48-202ENST00000374730 FAM229AH3BQW9 127 aa7.69□□□□□ -1.18
USP48-202ENST00000374730 ADAM23O75077 832 aa7.69□□□□□ -1.18
USP48-202ENST00000374730 RAC1P63000 192 aa7.69□□□□□ -1.18
USP48-202ENST00000374730 PERM1Q5SV97 790 aa7.69□□□□□ -1.18
USP48-202ENST00000374730 ELMSAN1Q6PJG2 1045 aa7.69□□□□□ -1.18
USP48-202ENST00000374730 MMP20O60882 483 aa7.68□□□□□ -1.18
USP48-202ENST00000374730 ELNP15502 786 aa7.68□□□□□ -1.18
USP48-202ENST00000374730 GATA4P43694 442 aa7.68□□□□□ -1.18
USP48-202ENST00000374730 GRIK5Q16478 980 aa7.68□□□□□ -1.18
USP48-202ENST00000374730 HELQQ8TDG4 1101 aa7.68□□□□□ -1.18
USP48-202ENST00000374730 SEPT3Q9UH03 358 aa7.68□□□□□ -1.18
USP48-202ENST00000374730 FNDC3AQ9Y2H6 1198 aaKnown RBP7.68□□□□□ -1.18
USP48-202ENST00000374730 PEG3Q9GZU2 1588 aa7.67□□□□□ -1.18
USP48-202ENST00000374730 UBAP1LF5GYI3 381 aa7.67□□□□□ -1.18
USP48-202ENST00000374730 EIF2AK2P19525 551 aaKnown RBP7.67□□□□□ -1.18
USP48-202ENST00000374730 SSFA2P28290 1259 aa7.67□□□□□ -1.18
USP48-202ENST00000374730 MLLT1Q03111 559 aaPredicted RBP7.67□□□□□ -1.18
USP48-202ENST00000374730 MSL1Q68DK7 614 aa7.67□□□□□ -1.18
USP48-202ENST00000374730 DTWD1Q8N5C7 304 aa7.67□□□□□ -1.18
USP48-202ENST00000374730 C9orf172C9J069 976 aa7.66□□□□□ -1.18
USP48-202ENST00000374730 K7ELQ4 463 aaPredicted RBP7.66□□□□□ -1.18
USP48-202ENST00000374730 FMR1NBQ8N0W7 255 aaPredicted RBP7.66□□□□□ -1.18
USP48-202ENST00000374730 SMARCA2P51531 1590 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms