RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ZNF830Q96NB3 372 aaPredicted RBP12.89□□□□□ -0.35
CXCL12-203ENST00000374429 LIMCH1Q9UPQ0 1083 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 ATP2B1P20020 1258 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 SYT1P21579 422 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 MRE11P49959 708 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 OTUD7BQ6GQQ9 843 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 PIBF1Q8WXW3 757 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 C8orf37Q96NL8 207 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 LSG1Q9H089 658 aaKnown RBP12.89□□□□□ -0.35
CXCL12-203ENST00000374429 ANKARQ7Z5J8 1434 aa12.89□□□□□ -0.35
CXCL12-203ENST00000374429 A0A1B0GUL7 405 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 DNTTIP2Q5QJE6 756 aaKnown RBP12.88□□□□□ -0.35
CXCL12-203ENST00000374429 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 CKAP2LQ8IYA6 745 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 TMEM63CQ9P1W3 806 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 A0A087WWV3 80 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 ERCC4Q92889 916 aaPredicted RBP12.88□□□□□ -0.35
CXCL12-203ENST00000374429 OSBPL3Q9H4L5 887 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 ABCF2Q9UG63 623 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 ARHGAP23Q9P227 1491 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 HSPA4P34932 840 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 ME3Q16798 604 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
CXCL12-203ENST00000374429 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
CXCL12-203ENST00000374429 MEGF6O75095 1541 aa12.87□□□□□ -0.35
CXCL12-203ENST00000374429 IFIT5Q13325 482 aaKnown RBP12.87□□□□□ -0.35
CXCL12-203ENST00000374429 PIK3C2AO00443 1686 aa12.87□□□□□ -0.35
CXCL12-203ENST00000374429 PHF14O94880 888 aa12.87□□□□□ -0.35
CXCL12-203ENST00000374429 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
CXCL12-203ENST00000374429 STX6O43752 255 aa12.87□□□□□ -0.35
CXCL12-203ENST00000374429 STARD3NLO95772 234 aa12.87□□□□□ -0.35
CXCL12-203ENST00000374429 RBSNQ9H1K0 784 aa12.87□□□□□ -0.35
CXCL12-203ENST00000374429 STAP2Q9UGK3 403 aa12.87□□□□□ -0.35
CXCL12-203ENST00000374429 TPCN1Q9ULQ1 816 aa12.87□□□□□ -0.35
CXCL12-203ENST00000374429 CCDC171Q6TFL3 1326 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 SLC27A2O14975 620 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 KCNQ2O43526 872 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 ATP6V1AP38606 617 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 APOBRQ0VD83 1088 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 SKOR2Q2VWA4 1001 aaPredicted RBP12.86□□□□□ -0.35
CXCL12-203ENST00000374429 RNF20Q5VTR2 975 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 SPC24Q8NBT2 197 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 PLBD2Q8NHP8 589 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 INCENPQ9NQS7 918 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 RAD50Q92878 1312 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 SETD1AO15047 1707 aaKnown RBP12.86□□□□□ -0.35
CXCL12-203ENST00000374429 FAM98CQ17RN3 349 aaKnown RBP12.86□□□□□ -0.35
CXCL12-203ENST00000374429 BICD2Q8TD16 824 aa12.86□□□□□ -0.35
CXCL12-203ENST00000374429 CWC22Q9HCG8 908 aaKnown RBP12.86□□□□□ -0.35
CXCL12-203ENST00000374429 Q6ZUG5 572 aa12.85□□□□□ -0.35
CXCL12-203ENST00000374429 ZHX1Q9UKY1 873 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-203ENST00000374429 NGLY1Q96IV0 654 aa12.85□□□□□ -0.35
CXCL12-203ENST00000374429 GREM2Q9H772 168 aa12.85□□□□□ -0.35
CXCL12-203ENST00000374429 GJB4Q9NTQ9 266 aa12.85□□□□□ -0.35
CXCL12-203ENST00000374429 SLIT1O75093 1534 aa12.85□□□□□ -0.35
CXCL12-203ENST00000374429 HOXB7P09629 217 aa12.85□□□□□ -0.35
CXCL12-203ENST00000374429 CCDC158Q5M9N0 1113 aa12.85□□□□□ -0.35
CXCL12-203ENST00000374429 REREQ9P2R6 1566 aa12.85□□□□□ -0.35
CXCL12-203ENST00000374429 PLCD3Q8N3E9 789 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 PAG1Q9NWQ8 432 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-203ENST00000374429 KNDC1Q76NI1 1749 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 SCARF1Q14162 830 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 FTOQ9C0B1 505 aaKnown RBP eCLIP12.84□□□□□ -0.35
CXCL12-203ENST00000374429 WDR17Q8IZU2 1322 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 KIF24Q5T7B8 1368 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 ANKRD26Q9UPS8 1709 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 KDM4FA0A1W2PPD8 638 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 WTIPA6NIX2 430 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-203ENST00000374429 ZAP70P43403 619 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 DZIP3Q86Y13 1208 aaKnown RBP12.84□□□□□ -0.35
CXCL12-203ENST00000374429 MPHOSPH8Q99549 860 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 MON2Q7Z3U7 1717 aa12.84□□□□□ -0.35
CXCL12-203ENST00000374429 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-203ENST00000374429 ITGA6P23229 1130 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 MSNP26038 577 aaKnown RBP12.83□□□□□ -0.36
CXCL12-203ENST00000374429 CDC37L1Q7L3B6 337 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 MIGA1Q8NAN2 632 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 SEC31BQ9NQW1 1179 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 WWC3Q9ULE0 1092 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 ISM2Q6H9L7 571 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 BABAM1Q9NWV8 329 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-203ENST00000374429 IRS4O14654 1257 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-203ENST00000374429 KLHL40Q2TBA0 621 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 DRC7Q8IY82 874 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 NEK1Q96PY6 1258 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 SALL3Q9BXA9 1300 aa12.83□□□□□ -0.36
CXCL12-203ENST00000374429 WDR33Q9C0J8 1336 aaKnown RBP12.83□□□□□ -0.36
CXCL12-203ENST00000374429 EP400Q96L91 3159 aa12.82□□□□□ -0.36
CXCL12-203ENST00000374429 MYL10Q9BUA6 226 aa12.82□□□□□ -0.36
CXCL12-203ENST00000374429 PDCL3Q9H2J4 239 aa12.82□□□□□ -0.36
CXCL12-203ENST00000374429 USP25Q9UHP3 1055 aa12.82□□□□□ -0.36
CXCL12-203ENST00000374429 DDB1Q16531 1140 aa12.82□□□□□ -0.36
CXCL12-203ENST00000374429 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms