RNA–Protein interactions for RNA: ENST00000374338.4

LDLRAP1-201, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAP1, Length 2,940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-201ENST00000374338 PHKG2P15735 406 aa20.48■□□□□ 0.87
LDLRAP1-201ENST00000374338 TATP17735 454 aaPredicted RBP20.48■□□□□ 0.87
LDLRAP1-201ENST00000374338 KRT222Q8N1A0 295 aa20.48■□□□□ 0.87
LDLRAP1-201ENST00000374338 NPHP3Q7Z494 1330 aa20.48■□□□□ 0.87
LDLRAP1-201ENST00000374338 RAD50Q92878 1312 aa20.48■□□□□ 0.87
LDLRAP1-201ENST00000374338 GLRX3O76003 335 aaKnown RBP20.48■□□□□ 0.87
LDLRAP1-201ENST00000374338 NMIQ13287 307 aaPredicted RBP20.48■□□□□ 0.87
LDLRAP1-201ENST00000374338 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
LDLRAP1-201ENST00000374338 HYPKQ9NX55 129 aa20.48■□□□□ 0.87
LDLRAP1-201ENST00000374338 CHRM1P11229 460 aaPredicted RBP20.47■□□□□ 0.87
LDLRAP1-201ENST00000374338 A0A0D9SFI3 127 aa20.47■□□□□ 0.87
LDLRAP1-201ENST00000374338 STK3Q13188 491 aa20.47■□□□□ 0.87
LDLRAP1-201ENST00000374338 FAM173BQ6P4H8 233 aa20.47■□□□□ 0.87
LDLRAP1-201ENST00000374338 TTC5Q8N0Z6 440 aa20.47■□□□□ 0.87
LDLRAP1-201ENST00000374338 CCDC129Q6ZRS4 1044 aa20.46■□□□□ 0.87
LDLRAP1-201ENST00000374338 FSD1Q9BTV5 496 aa20.46■□□□□ 0.87
LDLRAP1-201ENST00000374338 NEURL1BA8MQ27 555 aa20.46■□□□□ 0.87
LDLRAP1-201ENST00000374338 HOXB7P09629 217 aa20.46■□□□□ 0.87
LDLRAP1-201ENST00000374338 CUL4AQ13619 759 aa20.46■□□□□ 0.87
LDLRAP1-201ENST00000374338 C16orf45Q96MC5 204 aaPredicted RBP20.46■□□□□ 0.87
LDLRAP1-201ENST00000374338 SEC62Q99442 399 aaKnown RBP20.46■□□□□ 0.87
LDLRAP1-201ENST00000374338 TMEM94Q12767 1356 aa20.45■□□□□ 0.86
LDLRAP1-201ENST00000374338 TRERF1Q96PN7 1200 aa20.45■□□□□ 0.86
LDLRAP1-201ENST00000374338 DDX58O95786 925 aaKnown RBP20.45■□□□□ 0.86
LDLRAP1-201ENST00000374338 LRMPQ12912 555 aa20.45■□□□□ 0.86
LDLRAP1-201ENST00000374338 ANKRD13DQ6ZTN6 518 aa20.45■□□□□ 0.86
LDLRAP1-201ENST00000374338 ZNF589Q86UQ0 364 aaPredicted RBP20.45■□□□□ 0.86
LDLRAP1-201ENST00000374338 FERMT3Q86UX7 667 aa20.45■□□□□ 0.86
LDLRAP1-201ENST00000374338 C1orf167Q5SNV9 1468 aa20.44■□□□□ 0.86
LDLRAP1-201ENST00000374338 PTGS1P23219 599 aa20.44■□□□□ 0.86
LDLRAP1-201ENST00000374338 NEXNQ0ZGT2 675 aa20.44■□□□□ 0.86
LDLRAP1-201ENST00000374338 GCKRQ14397 625 aa20.44■□□□□ 0.86
LDLRAP1-201ENST00000374338 STRN4Q9NRL3 753 aa20.44■□□□□ 0.86
LDLRAP1-201ENST00000374338 KDM6AO15550 1401 aaPredicted RBP20.44■□□□□ 0.86
LDLRAP1-201ENST00000374338 SMTNL1A8MU46 457 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 TFCP2Q12800 502 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 CCDC183Q5T5S1 534 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 MEGF6O75095 1541 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 TPM3P06753 285 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 CABP4P57796 275 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 ANAPC15P60006 121 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 HSP90AB4PQ58FF6 505 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 TSPYL1Q9H0U9 437 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 RBM8AQ9Y5S9 174 aaKnown RBP20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 A0A087WZG4 1122 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 VPS37CA5D8V6 355 aaPredicted RBP20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 ALDH1L1O75891 902 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 SECISBP2LQ93073 1101 aaKnown RBP20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 ZBTB3Q9H5J0 574 aa20.43■□□□□ 0.86
LDLRAP1-201ENST00000374338 PXDNLA1KZ92 1463 aa20.42■□□□□ 0.86
LDLRAP1-201ENST00000374338 A1BGP04217 495 aa20.42■□□□□ 0.86
LDLRAP1-201ENST00000374338 LRRC2Q9BYS8 371 aa20.42■□□□□ 0.86
LDLRAP1-201ENST00000374338 PDRG1Q9NUG6 133 aa20.42■□□□□ 0.86
LDLRAP1-201ENST00000374338 FEZ2Q9UHY8 353 aaPredicted RBP20.42■□□□□ 0.86
LDLRAP1-201ENST00000374338 SYT1P21579 422 aa20.42■□□□□ 0.86
LDLRAP1-201ENST00000374338 FOSBP53539 338 aa20.42■□□□□ 0.86
LDLRAP1-201ENST00000374338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 TTLL7Q6ZT98 887 aa20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 DDX46Q7L014 1031 aaKnown RBP20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 IFNL2Q8IZJ0 200 aa20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 TTC14Q96N46 770 aa20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 V9GYY5 206 aaPredicted RBP20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 CACNA1FO60840 1977 aa20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 ZNF594Q96JF6 807 aaPredicted RBP20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 FAM53CQ9NYF3 392 aa20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 TAOK2Q9UL54 1235 aa20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 KAT6BQ8WYB5 2073 aa20.41■□□□□ 0.86
LDLRAP1-201ENST00000374338 LARP1Q6PKG0 1096 aaKnown RBP20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 NRBP1Q9UHY1 535 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 SMC3Q9UQE7 1217 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 GJB2P29033 226 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 MCM2P49736 904 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 CAMK4Q16566 473 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 NEUROD6Q96NK8 337 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 KDM3BQ7LBC6 1761 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 RPAP1Q9BWH6 1393 aaPredicted RBP20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 ME3Q16798 604 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 ZBTB9Q96C00 473 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 DBNDD2Q9BQY9 259 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 LIMCH1Q9UPQ0 1083 aa20.4■□□□□ 0.86
LDLRAP1-201ENST00000374338 MTX1Q13505 466 aa20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 GPATCH3Q96I76 525 aa20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 AOX1Q06278 1338 aa20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 MED1Q15648 1581 aaPredicted RBP20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 TUBGCP6Q96RT7 1819 aa20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 KMT5BQ4FZB7 885 aa20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 CREB3L3Q68CJ9 461 aa20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 TOM1L2Q6ZVM7 507 aa20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 ST7Q9NRC1 585 aa20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 DBNLQ9UJU6 430 aaKnown RBP20.39■□□□□ 0.85
LDLRAP1-201ENST00000374338 HNRNPH2P55795 449 aaKnown RBP20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 TIMM10P62072 90 aa20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 LMBR1LQ6UX01 489 aa20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 TTC41PQ6P2S7 1318 aa20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 HEG1Q9ULI3 1381 aa20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 DNM1Q05193 864 aaKnown RBP20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 ZNF592Q92610 1267 aa20.38■□□□□ 0.85
LDLRAP1-201ENST00000374338 METTL22Q9BUU2 404 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms