RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 SCN7AQ01118 1682 aa16.06■□□□□ 0.16
A1CF-204ENST00000373997 ERVV-1B6SEH8 477 aa16.06■□□□□ 0.16
A1CF-204ENST00000373997 ST18O60284 1047 aa16.06■□□□□ 0.16
A1CF-204ENST00000373997 SASH1O94885 1247 aa16.06■□□□□ 0.16
A1CF-204ENST00000373997 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.06■□□□□ 0.16
A1CF-204ENST00000373997 ESPNB1AK53 854 aa16.06■□□□□ 0.16
A1CF-204ENST00000373997 PCCAP05165 728 aaPredicted RBP16.06■□□□□ 0.16
A1CF-204ENST00000373997 CYP2E1P05181 493 aaPredicted RBP16.06■□□□□ 0.16
A1CF-204ENST00000373997 PTPN12Q05209 780 aaKnown RBP16.06■□□□□ 0.16
A1CF-204ENST00000373997 TRIM44Q96DX7 344 aaPredicted RBP16.06■□□□□ 0.16
A1CF-204ENST00000373997 AOX1Q06278 1338 aa16.05■□□□□ 0.16
A1CF-204ENST00000373997 AACSQ86V21 672 aa16.05■□□□□ 0.16
A1CF-204ENST00000373997 SYNE4Q8N205 404 aa16.05■□□□□ 0.16
A1CF-204ENST00000373997 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
A1CF-204ENST00000373997 COPRSQ9NQ92 184 aa16.05■□□□□ 0.16
A1CF-204ENST00000373997 SPEF2Q9C093 1822 aa16.05■□□□□ 0.16
A1CF-204ENST00000373997 LAMB2P55268 1798 aa16.05■□□□□ 0.16
A1CF-204ENST00000373997 DDX60Q8IY21 1712 aaKnown RBP16.05■□□□□ 0.16
A1CF-204ENST00000373997 UBN2Q6ZU65 1347 aa16.04■□□□□ 0.16
A1CF-204ENST00000373997 TRIM6-TRIM34B2RNG4 842 aa16.04■□□□□ 0.16
A1CF-204ENST00000373997 CAMTA2O94983 1202 aa16.04■□□□□ 0.16
A1CF-204ENST00000373997 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
A1CF-204ENST00000373997 RILPL2Q969X0 211 aa16.04■□□□□ 0.16
A1CF-204ENST00000373997 CCDC85AQ96PX6 553 aaPredicted RBP16.04■□□□□ 0.16
A1CF-204ENST00000373997 DDX49Q9Y6V7 483 aaKnown RBP16.04■□□□□ 0.16
A1CF-204ENST00000373997 MAP4K4O95819 1239 aaPredicted RBP16.03■□□□□ 0.16
A1CF-204ENST00000373997 CCDC173Q0VFZ6 552 aa16.03■□□□□ 0.16
A1CF-204ENST00000373997 CCNL1Q9UK58 526 aaPredicted RBP16.03■□□□□ 0.16
A1CF-204ENST00000373997 C4AP0C0L4 1744 aa16.03■□□□□ 0.16
A1CF-204ENST00000373997 C4BP0C0L5 1744 aa16.03■□□□□ 0.16
A1CF-204ENST00000373997 FAM177BA6PVY3 158 aa16.03■□□□□ 0.16
A1CF-204ENST00000373997 ERC2O15083 957 aa16.03■□□□□ 0.16
A1CF-204ENST00000373997 HOMEZQ8IX15 550 aa16.03■□□□□ 0.16
A1CF-204ENST00000373997 PI4K2BQ8TCG2 481 aa16.03■□□□□ 0.16
A1CF-204ENST00000373997 TRMT112Q9UI30 125 aaKnown RBP16.03■□□□□ 0.16
A1CF-204ENST00000373997 EP400Q96L91 3159 aa16.03■□□□□ 0.16
A1CF-204ENST00000373997 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.16
A1CF-204ENST00000373997 ZNF445P59923 1031 aa16.02■□□□□ 0.16
A1CF-204ENST00000373997 SMIM5Q71RC9 77 aa16.02■□□□□ 0.16
A1CF-204ENST00000373997 ZNF34Q8IZ26 560 aa16.02■□□□□ 0.16
A1CF-204ENST00000373997 ZNF594Q96JF6 807 aaPredicted RBP16.02■□□□□ 0.16
A1CF-204ENST00000373997 PPP1R9BQ96SB3 815 aa16.02■□□□□ 0.16
A1CF-204ENST00000373997 CCDC8Q9H0W5 538 aaPredicted RBP16.02■□□□□ 0.16
A1CF-204ENST00000373997 CDHR2Q9BYE9 1310 aa16.02■□□□□ 0.15
A1CF-204ENST00000373997 TFCP2Q12800 502 aa16.01■□□□□ 0.15
A1CF-204ENST00000373997 EAF2Q96CJ1 260 aaPredicted RBP16.01■□□□□ 0.15
A1CF-204ENST00000373997 TLR7Q9NYK1 1049 aaKnown RBP16.01■□□□□ 0.15
A1CF-204ENST00000373997 USP42Q9H9J4 1324 aaKnown RBP16.01■□□□□ 0.15
A1CF-204ENST00000373997 ANP32BQ92688 251 aaKnown RBP16.01■□□□□ 0.15
A1CF-204ENST00000373997 GPATCH3Q96I76 525 aa16.01■□□□□ 0.15
A1CF-204ENST00000373997 TTC41PQ6P2S7 1318 aa16■□□□□ 0.15
A1CF-204ENST00000373997 IRS4O14654 1257 aaPredicted RBP16■□□□□ 0.15
A1CF-204ENST00000373997 KRT27Q7Z3Y8 459 aa16■□□□□ 0.15
A1CF-204ENST00000373997 PLA2G12BQ9BX93 195 aa16■□□□□ 0.15
A1CF-204ENST00000373997 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
A1CF-204ENST00000373997 ECHDC1Q9NTX5 307 aa16■□□□□ 0.15
A1CF-204ENST00000373997 GNPATO15228 680 aa15.99■□□□□ 0.15
A1CF-204ENST00000373997 CCDC57Q2TAC2 916 aa15.99■□□□□ 0.15
A1CF-204ENST00000373997 SUSD4Q5VX71 490 aa15.99■□□□□ 0.15
A1CF-204ENST00000373997 NAP1L5Q96NT1 182 aaPredicted RBP15.99■□□□□ 0.15
A1CF-204ENST00000373997 NIP7Q9Y221 180 aaKnown RBP eCLIP15.99■□□□□ 0.15
A1CF-204ENST00000373997 UBR3Q6ZT12 1888 aa15.99■□□□□ 0.15
A1CF-204ENST00000373997 TULP1O00294 542 aaPredicted RBP15.98■□□□□ 0.15
A1CF-204ENST00000373997 GLRX3O76003 335 aaKnown RBP15.98■□□□□ 0.15
A1CF-204ENST00000373997 MCM2P49736 904 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 LRRC24Q50LG9 513 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 MCTP1Q6DN14 999 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 BCL11BQ9C0K0 894 aaPredicted RBP15.98■□□□□ 0.15
A1CF-204ENST00000373997 LMBRD1Q9NUN5 540 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 CTSWP56202 376 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 TNNI3KQ59H18 835 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 TAF7LQ5H9L4 462 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 ZNF772Q68DY9 489 aaPredicted RBP15.98■□□□□ 0.15
A1CF-204ENST00000373997 ATG9AQ7Z3C6 839 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 ZNF652Q9Y2D9 606 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 FPGT-TNNI3KV9GXZ4 949 aa15.98■□□□□ 0.15
A1CF-204ENST00000373997 PUS3Q9BZE2 481 aaKnown RBP15.97■□□□□ 0.15
A1CF-204ENST00000373997 EYA2O00167 538 aa15.97■□□□□ 0.15
A1CF-204ENST00000373997 CSF1RP07333 972 aa15.97■□□□□ 0.15
A1CF-204ENST00000373997 RC3H1Q5TC82 1133 aaKnown RBP15.97■□□□□ 0.15
A1CF-204ENST00000373997 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
A1CF-204ENST00000373997 CNTROBQ8N137 903 aa15.97■□□□□ 0.15
A1CF-204ENST00000373997 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
A1CF-204ENST00000373997 GREM2Q9H772 168 aa15.97■□□□□ 0.15
A1CF-204ENST00000373997 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
A1CF-204ENST00000373997 PDE8AO60658 829 aa15.96■□□□□ 0.15
A1CF-204ENST00000373997 TRIM37O94972 964 aa15.96■□□□□ 0.15
A1CF-204ENST00000373997 RBM6P78332 1123 aaKnown RBP15.96■□□□□ 0.15
A1CF-204ENST00000373997 IFIT5Q13325 482 aaKnown RBP15.96■□□□□ 0.15
A1CF-204ENST00000373997 PARP10Q53GL7 1025 aa15.96■□□□□ 0.15
A1CF-204ENST00000373997 TTLL11Q8NHH1 800 aa15.96■□□□□ 0.15
A1CF-204ENST00000373997 SH3TC1Q8TE82 1336 aa15.96■□□□□ 0.15
A1CF-204ENST00000373997 TAF1P21675 1872 aa15.96■□□□□ 0.14
A1CF-204ENST00000373997 ZNF609O15014 1411 aa15.95■□□□□ 0.14
A1CF-204ENST00000373997 RPS6KA4O75676 772 aa15.95■□□□□ 0.14
A1CF-204ENST00000373997 HCLS1P14317 486 aaPredicted RBP15.95■□□□□ 0.14
A1CF-204ENST00000373997 CHMLP26374 656 aa15.95■□□□□ 0.14
A1CF-204ENST00000373997 IL15P40933 162 aaPredicted RBP15.95■□□□□ 0.14
A1CF-204ENST00000373997 DBNLQ9UJU6 430 aaKnown RBP15.95■□□□□ 0.14
A1CF-204ENST00000373997 ITGA6P23229 1130 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 324.5 ms