RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 MNS1Q8NEH6 495 aa11.17□□□□□ -0.62
SF3A3-201ENST00000373019 CARD6Q9BX69 1037 aa11.17□□□□□ -0.62
SF3A3-201ENST00000373019 LIMCH1Q9UPQ0 1083 aa11.17□□□□□ -0.62
SF3A3-201ENST00000373019 ST3GAL1Q11201 340 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 PLEKHO1Q53GL0 409 aaPredicted RBP11.16□□□□□ -0.62
SF3A3-201ENST00000373019 PROSER2Q86WR7 435 aaPredicted RBP11.16□□□□□ -0.62
SF3A3-201ENST00000373019 UNC5CLQ8IV45 518 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 SGSM3Q96HU1 749 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 THUMPD2Q9BTF0 503 aaKnown RBP11.16□□□□□ -0.62
SF3A3-201ENST00000373019 API5Q9BZZ5 524 aaKnown RBP11.16□□□□□ -0.62
SF3A3-201ENST00000373019 OSBPL5Q9H0X9 879 aaPredicted RBP11.16□□□□□ -0.62
SF3A3-201ENST00000373019 TDO2P48775 406 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 ETF1P62495 437 aaKnown RBP11.16□□□□□ -0.62
SF3A3-201ENST00000373019 ANKRD20A12PQ8NF67 263 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 RNF217Q8TC41 542 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 KAT2BQ92831 832 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 PARP3Q9Y6F1 533 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 ZNF335Q9H4Z2 1342 aaPredicted RBP11.16□□□□□ -0.62
SF3A3-201ENST00000373019 EVCP57679 992 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 LRRC31Q6UY01 552 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 DDX19AQ9NUU7 478 aaKnown RBP11.16□□□□□ -0.62
SF3A3-201ENST00000373019 SNX14Q9Y5W7 946 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 PHLPP2Q6ZVD8 1323 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 KIAA0232Q92628 1395 aa11.16□□□□□ -0.62
SF3A3-201ENST00000373019 IRF6O14896 467 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 ARMCX5Q6P1M9 558 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 DHX40Q8IX18 779 aaKnown RBP11.15□□□□□ -0.62
SF3A3-201ENST00000373019 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 DNAI1Q9UI46 699 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 ADGRF5Q8IZF2 1346 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 UBAP1LF5GYI3 381 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 HOMEZQ8IX15 550 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 C8orf58Q8NAV2 365 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 PARD6BQ9BYG5 372 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 ARFGAP3Q9NP61 516 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 AKAP2Q9Y2D5 859 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 ADGRB3O60242 1522 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 KRT85P78386 507 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 CCDC83Q8IWF9 413 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 MBIPQ9NS73 344 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 VPS18Q9P253 973 aa11.15□□□□□ -0.62
SF3A3-201ENST00000373019 VPS37CA5D8V6 355 aaPredicted RBP11.14□□□□□ -0.63
SF3A3-201ENST00000373019 CAVIN2O95810 425 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 TPM1P09493 284 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 CPA1P15085 419 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 TADA2BQ86TJ2 420 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 EFCAB13Q8IY85 973 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 GPR161Q8N6U8 529 aaKnown RBP11.14□□□□□ -0.63
SF3A3-201ENST00000373019 GOLGA6L19H0YKK7 550 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 ZNF853P0CG23 659 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 TWISTNBQ3B726 338 aaPredicted RBP11.14□□□□□ -0.63
SF3A3-201ENST00000373019 RSRC2Q7L4I2 434 aaKnown RBP11.14□□□□□ -0.63
SF3A3-201ENST00000373019 PGBD1Q96JS3 809 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 SRRTQ9BXP5 876 aaKnown RBP11.14□□□□□ -0.63
SF3A3-201ENST00000373019 HYPKQ9NX55 129 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 PIK3C2BO00750 1634 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 NSD2O96028 1365 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 CCDC196A0A1B0GTZ2 297 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 N4BP1O75113 896 aaKnown RBP11.14□□□□□ -0.63
SF3A3-201ENST00000373019 TUBB4AP04350 444 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 KCNJ6P48051 423 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 LONRF2Q1L5Z9 754 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 LRRFIP1Q32MZ4 808 aaKnown RBP11.14□□□□□ -0.63
SF3A3-201ENST00000373019 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 FERMT3Q86UX7 667 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 TBX22Q9Y458 520 aa11.14□□□□□ -0.63
SF3A3-201ENST00000373019 GSDMDP57764 484 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 HSP90AB3PQ58FF7 597 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 KCNV1Q6PIU1 500 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 RILPL2Q969X0 211 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 MEIS3Q99687 375 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 PDE11AQ9HCR9 933 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 MKRN1Q9UHC7 482 aaKnown RBP11.13□□□□□ -0.63
SF3A3-201ENST00000373019 TTC41PQ6P2S7 1318 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 NPHP3Q7Z494 1330 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 APOBRQ0VD83 1088 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 PLEKHA4Q9H4M7 779 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 ADCY9O60503 1353 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 LRRC7Q96NW7 1537 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 A0A087WWV3 80 aa11.13□□□□□ -0.63
SF3A3-201ENST00000373019 EPB41L2O43491 1005 aaKnown RBP11.12□□□□□ -0.63
SF3A3-201ENST00000373019 URI1O94763 535 aaPredicted RBP11.12□□□□□ -0.63
SF3A3-201ENST00000373019 CCDC30Q5VVM6 783 aa11.12□□□□□ -0.63
SF3A3-201ENST00000373019 TFIP11Q9UBB9 837 aaKnown RBP11.12□□□□□ -0.63
SF3A3-201ENST00000373019 LEO1Q8WVC0 666 aaPredicted RBP11.12□□□□□ -0.63
SF3A3-201ENST00000373019 KIF1BO60333 1816 aa11.12□□□□□ -0.63
SF3A3-201ENST00000373019 A0A087WUV0 522 aaPredicted RBP11.12□□□□□ -0.63
SF3A3-201ENST00000373019 PLEKHG1Q9ULL1 1385 aa11.12□□□□□ -0.63
SF3A3-201ENST00000373019 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
SF3A3-201ENST00000373019 QRICH2Q9H0J4 1663 aa11.11□□□□□ -0.63
SF3A3-201ENST00000373019 GNAI1P63096 354 aa11.11□□□□□ -0.63
SF3A3-201ENST00000373019 VPS53Q5VIR6 699 aa11.11□□□□□ -0.63
SF3A3-201ENST00000373019 HOMER1Q86YM7 354 aa11.11□□□□□ -0.63
SF3A3-201ENST00000373019 DNAAF4Q8WXU2 420 aa11.11□□□□□ -0.63
SF3A3-201ENST00000373019 IMPACTQ9P2X3 320 aa11.11□□□□□ -0.63
SF3A3-201ENST00000373019 SMC2O95347 1197 aa11.11□□□□□ -0.63
SF3A3-201ENST00000373019 HNRNPH1P31943 449 aaKnown RBP11.11□□□□□ -0.63
SF3A3-201ENST00000373019 NBPF20Q3BBV1 942 aa11.11□□□□□ -0.63
SF3A3-201ENST00000373019 MAP9Q49MG5 647 aa11.11□□□□□ -0.63
SF3A3-201ENST00000373019 MICALL1Q8N3F8 863 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms